Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
---|---|
Accession | NC_011094 |
Length | 4,709,075 |
Click here to switch to the map view.
The map label for this gene is 194738392
Identifier: 194738392
GI number: 194738392
Start: 3187115
End: 3187489
Strand: Reverse
Name: 194738392
Synonym: SeSA_A3303
Alternate gene names: NA
Gene position: 3187489-3187115 (Counterclockwise)
Preceding gene: 194736502
Following gene: 194737705
Centisome position: 67.69
GC content: 49.33
Gene sequence:
>375_bases ATGCACGCTTTTAAACTCAATCAACCTGTTCCTGAATTACAGCCAGTCGGGAGTGTCAGCCTGTTAGGGGCGTTGCCAAC AGAAGGCGATCCCCAGGTCGCCGTTGCGATGATTTACGGTAAACCTGAGGATGTATTTACCTGTGGACTGTTTTCATCGA CCCGCGGCGGTTTCACGATGATTTATCCCTTTACCGAGCACGCAACCGTGCTGGAAGGGGAAGTGGAACTCACTGTCGCT GGTCAGGAACCGATACGTTTTTCACCGGGCGATAGTTGGTTTGTTGAACAGGGAACCGAAGTGGCATGGAAAGTTTTAAC GCCCCGTTTTGTAAAACATTATCTGGCAAACGTTGAAAGCCATAAACAGGATTGA
Upstream 100 bases:
>100_bases ATGGTCGCGACAGTTTACGTCTATTGCTGGTCAGTGCGGGAAAACTGATACATCAAACAGCCGGTTTCTGGAAAGGCCGG AATTAACCAGGAGAACATTA
Downstream 100 bases:
>100_bases ATCCTTTAATTGTTCGTCAGTAGCGTTGGTATCACTGGGGAGAATAACGCGCTCCCCACTTGCTATTAGCGCATGCGGGG ACGGCGTCACAACGTTATTT
Product: putative cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MHAFKLNQPVPELQPVGSVSLLGALPTEGDPQVAVAMIYGKPEDVFTCGLFSSTRGGFTMIYPFTEHATVLEGEVELTVA GQEPIRFSPGDSWFVEQGTEVAWKVLTPRFVKHYLANVESHKQD
Sequences:
>Translated_124_residues MHAFKLNQPVPELQPVGSVSLLGALPTEGDPQVAVAMIYGKPEDVFTCGLFSSTRGGFTMIYPFTEHATVLEGEVELTVA GQEPIRFSPGDSWFVEQGTEVAWKVLTPRFVKHYLANVESHKQD >Mature_124_residues MHAFKLNQPVPELQPVGSVSLLGALPTEGDPQVAVAMIYGKPEDVFTCGLFSSTRGGFTMIYPFTEHATVLEGEVELTVA GQEPIRFSPGDSWFVEQGTEVAWKVLTPRFVKHYLANVESHKQD
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13636; Mature: 13636
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAFKLNQPVPELQPVGSVSLLGALPTEGDPQVAVAMIYGKPEDVFTCGLFSSTRGGFTM CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCEEE IYPFTEHATVLEGEVELTVAGQEPIRFSPGDSWFVEQGTEVAWKVLTPRFVKHYLANVES EEECCCCCEEEECEEEEEEECCCCEEECCCCCEEEECCCEEEEEECCHHHHHHHHHCHHC HKQD CCCC >Mature Secondary Structure MHAFKLNQPVPELQPVGSVSLLGALPTEGDPQVAVAMIYGKPEDVFTCGLFSSTRGGFTM CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCEEE IYPFTEHATVLEGEVELTVAGQEPIRFSPGDSWFVEQGTEVAWKVLTPRFVKHYLANVES EEECCCCCEEEECEEEEEEECCCCEEECCCCCEEEECCCEEEEEECCHHHHHHHHHCHHC HKQD CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA