Click here to switch to the map view.

The map label for this gene is hyaF [H]

Identifier: 194737384

GI number: 194737384

Start: 1867477

End: 1868325

Strand: Direct

Name: hyaF [H]

Synonym: SeSA_A1933

Alternate gene names: 194737384

Gene position: 1867477-1868325 (Clockwise)

Preceding gene: 194737857

Following gene: 194737726

Centisome position: 39.66

GC content: 58.89

Gene sequence:

>849_bases
ATGAGCAACGCCTTTTTTCATCTGCTGGGGCCAGGTACGCAGCCTGATGACGCCAGTTTCTCGATGAATCCCTTACCGCT
CACCTGTCAGGTCAATGGCGACCCAAGTATGGCGGCGCTGGAGCGCTGCGCTCACAGCCCGGCGGTGATGGCATTGTTGA
CCGATCTGCGAGGTCAGCTTGCCCGGTGCATTCCGGAAGTCGGCGACGTGCTGGGATGGGAGTTATCTCCCCTGAATGCC
GATGATCTCTCATTCCTCAATACGTTATTGGGAGAAGGCGAAGTCTCGGTACGCATTCAGCATCCGGACGGGAGTGAAAG
CGAGATCCAGGAGACCATCTTCTGCGGCCTGTGGCGGGTACGCCATCTGCATAACCGACGCCTGCTGACGGATCGTCTGG
AAGCGGGTAGCGCGCCCCTGACATTGTGGCAAGCGGCGACTGCCGATACGCTGCCTGACGACTCTCTGCTGCCTCCGCCT
GTCGCTGGCCTGATGAATGGACTGCCGCTGGCCCATGAGTTATTGGCGCACGTACGCGATCCGGCGTTGCAACCTCACAG
CATCAATTTGACCCAACTGCCACTCAGCGAGGCCGATCGTCTTTTTCTGGCGCGTTTATGCGGACACGGGAACATCCAAA
TTCGCATCTCCGGGTATGGCGAAAGCCAAATCAACGCCACAGCATTGCGCCATCTCTGGCATGTGCGCTGTCTGGACGCC
CTTAAAGGGCCGTTGCTCGATAGCTATGAGATTTGTCCTTTGCCGGAGCTGGTACTGGCGGCACCGGAAGATCTGGCCGA
TTCGCGCCAGCGCCTGGATGAAGTCTGCCGATGGCTGGAGACGCGATAA

Upstream 100 bases:

>100_bases
GCGAGTTACGCGGCGCGCTCAGCGGCATTCATCCCTGGGCTGAACTGCTCACGCTGATGCGTTCGATGGTTGACACTCCC
GCAGCGCAGGAGACAGCACA

Downstream 100 bases:

>100_bases
CGCTCTCAACAGGAACGTAACCGGTGTCCGGTACTGATTAGCTTTTTACTCTCTTTCTGCCTACAGGAGTTAGCATGTGG
GATGTCATTGACTTATCGCG

Product: hydrogenase-1 operon protein HyaF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSNAFFHLLGPGTQPDDASFSMNPLPLTCQVNGDPSMAALERCAHSPAVMALLTDLRGQLARCIPEVGDVLGWELSPLNA
DDLSFLNTLLGEGEVSVRIQHPDGSESEIQETIFCGLWRVRHLHNRRLLTDRLEAGSAPLTLWQAATADTLPDDSLLPPP
VAGLMNGLPLAHELLAHVRDPALQPHSINLTQLPLSEADRLFLARLCGHGNIQIRISGYGESQINATALRHLWHVRCLDA
LKGPLLDSYEICPLPELVLAAPEDLADSRQRLDEVCRWLETR

Sequences:

>Translated_282_residues
MSNAFFHLLGPGTQPDDASFSMNPLPLTCQVNGDPSMAALERCAHSPAVMALLTDLRGQLARCIPEVGDVLGWELSPLNA
DDLSFLNTLLGEGEVSVRIQHPDGSESEIQETIFCGLWRVRHLHNRRLLTDRLEAGSAPLTLWQAATADTLPDDSLLPPP
VAGLMNGLPLAHELLAHVRDPALQPHSINLTQLPLSEADRLFLARLCGHGNIQIRISGYGESQINATALRHLWHVRCLDA
LKGPLLDSYEICPLPELVLAAPEDLADSRQRLDEVCRWLETR
>Mature_281_residues
SNAFFHLLGPGTQPDDASFSMNPLPLTCQVNGDPSMAALERCAHSPAVMALLTDLRGQLARCIPEVGDVLGWELSPLNAD
DLSFLNTLLGEGEVSVRIQHPDGSESEIQETIFCGLWRVRHLHNRRLLTDRLEAGSAPLTLWQAATADTLPDDSLLPPPV
AGLMNGLPLAHELLAHVRDPALQPHSINLTQLPLSEADRLFLARLCGHGNIQIRISGYGESQINATALRHLWHVRCLDAL
KGPLLDSYEICPLPELVLAAPEDLADSRQRLDEVCRWLETR

Specific function: Not known. Could enhance the incorporation of nickel to the hydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupH/hyaF family [H]

Homologues:

Organism=Escherichia coli, GI1787211, Length=279, Percent_Identity=74.910394265233, Blast_Score=425, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006894 [H]

Pfam domain/function: PF04809 HupH_C [H]

EC number: NA

Molecular weight: Translated: 30948; Mature: 30817

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAFFHLLGPGTQPDDASFSMNPLPLTCQVNGDPSMAALERCAHSPAVMALLTDLRGQL
CCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHH
ARCIPEVGDVLGWELSPLNADDLSFLNTLLGEGEVSVRIQHPDGSESEIQETIFCGLWRV
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
RHLHNRRLLTDRLEAGSAPLTLWQAATADTLPDDSLLPPPVAGLMNGLPLAHELLAHVRD
HHHHCCHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHC
PALQPHSINLTQLPLSEADRLFLARLCGHGNIQIRISGYGESQINATALRHLWHVRCLDA
CCCCCCCCCEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
LKGPLLDSYEICPLPELVLAAPEDLADSRQRLDEVCRWLETR
HCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNAFFHLLGPGTQPDDASFSMNPLPLTCQVNGDPSMAALERCAHSPAVMALLTDLRGQL
CCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHH
ARCIPEVGDVLGWELSPLNADDLSFLNTLLGEGEVSVRIQHPDGSESEIQETIFCGLWRV
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
RHLHNRRLLTDRLEAGSAPLTLWQAATADTLPDDSLLPPPVAGLMNGLPLAHELLAHVRD
HHHHCCHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHC
PALQPHSINLTQLPLSEADRLFLARLCGHGNIQIRISGYGESQINATALRHLWHVRCLDA
CCCCCCCCCEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
LKGPLLDSYEICPLPELVLAAPEDLADSRQRLDEVCRWLETR
HCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2180913; 8905232; 9278503 [H]