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The map label for this gene is yqjH [H]

Identifier: 194737378

GI number: 194737378

Start: 3286684

End: 3287451

Strand: Reverse

Name: yqjH [H]

Synonym: SeSA_A3404

Alternate gene names: 194737378

Gene position: 3287451-3286684 (Counterclockwise)

Preceding gene: 194736403

Following gene: 194734340

Centisome position: 69.81

GC content: 55.47

Gene sequence:

>768_bases
ATGACGACATCATCCGTACGCTACCCACAGCGTGTTCGTAATGAACTGCGTTTTCGCGAGCTGACCGTTCTGCGGGTAGA
ACGTATTAGCGCAGGATTTCAGCGGATCGTACTTGGCGGCGAGGCGCTGGACGGCTTTACCTCCCTGGGCTTTGACGATC
ACACGAAAGTTTTTTTCCCTGAGCCAGGCTGTCGCTTTACGCCCCCGACAGTCACTGAGGAAGGCATTATCTGGGGGGAG
GGCGTTCGTCCGGTCTCCAGGGATTACACGCCGCTGTATGACGAGGCGCGTCGCGAGCTGGCGCTGGATTTCTTTATCCA
CGATGGCGGCGTAGCCAGCCGTTGGGCAATGGAAGCCCGTGAAGGCGATACACTGACGATTGGCGGGCCGCGCGGTTCGC
TGGTGGTGCCGGAAGATTATGCCTGTCAGGTTTATGTCTGCGATGAGTCCGGTATGCCTGCGCTGCGTCGTCGTCTGGAA
TCGCTTAGTCGTCTGCCTGCGCGCCCTGCGGTAACCGCGCTGGTGAGCATTCAGGATGCCGCATATCGCGATTATCTCGC
CCATTTGACGGATATTACTGTGGAATATGTTGTTGGCGGCAATGAACAGGTAATGCAAACGCGCCTGTCGCAGCTGACAA
TACCAGAATCGGACTATTTCATCTGGATTACTGGCGAAGGCAAAACGGTAAAACGTTTAAGTCAGTGCTTTGAAAAGGAG
TTTGATCCACACCTGGTACGTGCGGCAGCCTATTGGCATCGTAAATAG

Upstream 100 bases:

>100_bases
CAGAACACTATCAAAAAACAGTTGCATTTTTACTGATTAACAATCATTATCATTTAAAAATTTAATTTAGATATATCGTA
TTACTTCACGAAGGCAAAAA

Downstream 100 bases:

>100_bases
CGGTATGGGGCGAGCTCTGTCAGAAACAAAAAAGCCACTCTTTAGAGTGGCTTAATTGTATGATTTTAAAGCTAAAATTT
GGTGGCCCCTGCTGGACTTG

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTTSSVRYPQRVRNELRFRELTVLRVERISAGFQRIVLGGEALDGFTSLGFDDHTKVFFPEPGCRFTPPTVTEEGIIWGE
GVRPVSRDYTPLYDEARRELALDFFIHDGGVASRWAMEAREGDTLTIGGPRGSLVVPEDYACQVYVCDESGMPALRRRLE
SLSRLPARPAVTALVSIQDAAYRDYLAHLTDITVEYVVGGNEQVMQTRLSQLTIPESDYFIWITGEGKTVKRLSQCFEKE
FDPHLVRAAAYWHRK

Sequences:

>Translated_255_residues
MTTSSVRYPQRVRNELRFRELTVLRVERISAGFQRIVLGGEALDGFTSLGFDDHTKVFFPEPGCRFTPPTVTEEGIIWGE
GVRPVSRDYTPLYDEARRELALDFFIHDGGVASRWAMEAREGDTLTIGGPRGSLVVPEDYACQVYVCDESGMPALRRRLE
SLSRLPARPAVTALVSIQDAAYRDYLAHLTDITVEYVVGGNEQVMQTRLSQLTIPESDYFIWITGEGKTVKRLSQCFEKE
FDPHLVRAAAYWHRK
>Mature_254_residues
TTSSVRYPQRVRNELRFRELTVLRVERISAGFQRIVLGGEALDGFTSLGFDDHTKVFFPEPGCRFTPPTVTEEGIIWGEG
VRPVSRDYTPLYDEARRELALDFFIHDGGVASRWAMEAREGDTLTIGGPRGSLVVPEDYACQVYVCDESGMPALRRRLES
LSRLPARPAVTALVSIQDAAYRDYLAHLTDITVEYVVGGNEQVMQTRLSQLTIPESDYFIWITGEGKTVKRLSQCFEKEF
DPHLVRAAAYWHRK

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=254, Percent_Identity=72.0472440944882, Blast_Score=379, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 28911; Mature: 28780

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSSVRYPQRVRNELRFRELTVLRVERISAGFQRIVLGGEALDGFTSLGFDDHTKVFFP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCHHCHHHHCCCCCCCEEEEC
EPGCRFTPPTVTEEGIIWGEGVRPVSRDYTPLYDEARRELALDFFIHDGGVASRWAMEAR
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHEEEEEEEECCCCCHHHHHHCC
EGDTLTIGGPRGSLVVPEDYACQVYVCDESGMPALRRRLESLSRLPARPAVTALVSIQDA
CCCEEEECCCCCCEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHEEHHHHH
AYRDYLAHLTDITVEYVVGGNEQVMQTRLSQLTIPESDYFIWITGEGKTVKRLSQCFEKE
HHHHHHHHHHHCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHC
FDPHLVRAAAYWHRK
CCHHHHHHHHHHCCC
>Mature Secondary Structure 
TTSSVRYPQRVRNELRFRELTVLRVERISAGFQRIVLGGEALDGFTSLGFDDHTKVFFP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCHHCHHHHCCCCCCCEEEEC
EPGCRFTPPTVTEEGIIWGEGVRPVSRDYTPLYDEARRELALDFFIHDGGVASRWAMEAR
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHEEEEEEEECCCCCHHHHHHCC
EGDTLTIGGPRGSLVVPEDYACQVYVCDESGMPALRRRLESLSRLPARPAVTALVSIQDA
CCCEEEECCCCCCEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHEEHHHHH
AYRDYLAHLTDITVEYVVGGNEQVMQTRLSQLTIPESDYFIWITGEGKTVKRLSQCFEKE
HHHHHHHHHHHCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHC
FDPHLVRAAAYWHRK
CCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]