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The map label for this gene is nudL [H]

Identifier: 194737033

GI number: 194737033

Start: 1900546

End: 1901124

Strand: Direct

Name: nudL [H]

Synonym: SeSA_A1969

Alternate gene names: 194737033

Gene position: 1900546-1901124 (Clockwise)

Preceding gene: 194736555

Following gene: 194736507

Centisome position: 40.36

GC content: 59.07

Gene sequence:

>579_bases
GTGGATACCAGCCGTCTGACGCTCGATCATTTCTTATCGCGCTTTCAGCTTTTGCGCCCGCAGATGACTCATGAAACGTT
GAATCAACGTCAGGCCGCCGTACTGATCCCTGTGGTTCGCCGCCCCCAGCCGGGGCTGCTGTTGACCCAGCGGGCTATTC
ATTTGCGCAAACACGCCGGACAGGTCGCCTTTCCCGGCGGGGCCGTGGACAGTACCGATGCTTCGCTTATCGCCGCAGCG
CTTCGCGAAGCGCAGGAGGAAGTCGCCATCCCGCCGCAAGCCGTGGAAGTGATTGGCGTTTTACCGCCGGTAGACAGCGT
GACCGGTTTTCAGGTCACCCCGGTGGTCGGCATTATTCCGCCAAATCTCCCCTGGCGCGCCAGTGAAGACGAAGTGTCTG
CGGTGTTTGAAATGCCGCTGGCGCAAGCGTTGCAACTGGGTCGATATCATCCGCTTGATGTTTACCGTCGCGGCAATTCG
CACCGCGTATGGCTCTCCTGGTATGAGCATTATTTCGTCTGGGGCATGACCGCAAACATTCTTCGTGAGCTGGCGCTGCA
AATCGGAGTGAAGCCCTGA

Upstream 100 bases:

>100_bases
AGCCGGCGGCGGTATCGTGGCCGATAGCAACGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGC
ACCCACTGGAGAACTAATAC

Downstream 100 bases:

>100_bases
CTGTACACAACGCCATTCACGTTGCCTCAAGGCGGTAACAATCGCCTCCCCCAAAGAGGCAGCCTGAAGGGCAACGTGTA
TATACTTAACTTTACGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQPGLLLTQRAIHLRKHAGQVAFPGGAVDSTDASLIAAA
LREAQEEVAIPPQAVEVIGVLPPVDSVTGFQVTPVVGIIPPNLPWRASEDEVSAVFEMPLAQALQLGRYHPLDVYRRGNS
HRVWLSWYEHYFVWGMTANILRELALQIGVKP

Sequences:

>Translated_192_residues
MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQPGLLLTQRAIHLRKHAGQVAFPGGAVDSTDASLIAAA
LREAQEEVAIPPQAVEVIGVLPPVDSVTGFQVTPVVGIIPPNLPWRASEDEVSAVFEMPLAQALQLGRYHPLDVYRRGNS
HRVWLSWYEHYFVWGMTANILRELALQIGVKP
>Mature_192_residues
MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQPGLLLTQRAIHLRKHAGQVAFPGGAVDSTDASLIAAA
LREAQEEVAIPPQAVEVIGVLPPVDSVTGFQVTPVVGIIPPNLPWRASEDEVSAVFEMPLAQALQLGRYHPLDVYRRGNS
HRVWLSWYEHYFVWGMTANILRELALQIGVKP

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=160, Percent_Identity=38.75, Blast_Score=87, Evalue=7e-18,
Organism=Escherichia coli, GI1788115, Length=192, Percent_Identity=87.5, Blast_Score=318, Evalue=2e-88,
Organism=Caenorhabditis elegans, GI17536993, Length=118, Percent_Identity=38.9830508474576, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI18859683, Length=189, Percent_Identity=30.1587301587302, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 21431; Mature: 21431

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: PS01293 UPF0035

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQPGLLLTQRAIHLRKHAG
CCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC
QVAFPGGAVDSTDASLIAAALREAQEEVAIPPQAVEVIGVLPPVDSVTGFQVTPVVGIIP
CEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCEEECCEEEEEC
PNLPWRASEDEVSAVFEMPLAQALQLGRYHPLDVYRRGNSHRVWLSWYEHYFVWGMTANI
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCEEEEEHHHHHHHHCCHHHH
LRELALQIGVKP
HHHHHHHHCCCC
>Mature Secondary Structure
MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQPGLLLTQRAIHLRKHAG
CCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC
QVAFPGGAVDSTDASLIAAALREAQEEVAIPPQAVEVIGVLPPVDSVTGFQVTPVVGIIP
CEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCEEECCEEEEEC
PNLPWRASEDEVSAVFEMPLAQALQLGRYHPLDVYRRGNSHRVWLSWYEHYFVWGMTANI
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCEEEEEHHHHHHHHCCHHHH
LRELALQIGVKP
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA