Click here to switch to the map view.

The map label for this gene is ydcK [H]

Identifier: 194736675

GI number: 194736675

Start: 1670785

End: 1671765

Strand: Direct

Name: ydcK [H]

Synonym: SeSA_A1727

Alternate gene names: 194736675

Gene position: 1670785-1671765 (Clockwise)

Preceding gene: 194736477

Following gene: 194734384

Centisome position: 35.48

GC content: 51.68

Gene sequence:

>981_bases
ATGACCAAATATCGACTGAGTGAAGAACCTCGTGCTTTTACTTATCAGGTAGACGGTGAGAAGAAAAGCGTCTTATTACG
ACAAGTTATTGCCGTAACGGATTTTAACGATGTTAAAGCCGGAACCTCCGGCGGCTGGGTTGATGCCGATAATGTGCTGT
CACAACAGGGGGATTGCTGGATTTATGATGAAAACGCGATGGCCTTTGCGGGCACGGAAATTACGGGTAATGCGCGTATC
ACGCAGCCGTGCACGCTCTACAATAACGTGCGAATAGGCGATAACGTCTGGATTGATCGCGCTGATATCAGCGATGGCGC
ACGGATAGGTGACAACGTCACCATTCAGTCCTCTTCCGTGCGCGGAGAGTGTGCGATTTATGGCGATGCCCGCGTGTTAA
ACCAGTCAGAAATTCTCGCCGTTCAGGGACTAACGCATGAACATGCGCAGATTTTACAAATTTACGATCGCGCCACCCTG
AGCCATTCGCGGATTGTCCATCAGGTACAGCTTTATGGCGACGCCACTATCACACACGCTTTTATTGAGCACCGGGCGGA
GGTCTTTGATTTCGCGCTCATCGAAGGCAACAAAGACAATAATGTCTGGATCTGTGACTGCGCCAAAGTCTATGGCCATG
CGCGGGTTATCGCCGGTACAGCGGAAGATGCTATCCCTACCCTTCGCTACAGCTCGCAGGTAGCGGAACATGCGTTAATC
GAAGGCAACTGTGTGTTAAAACATCATGTGCTGGTAGGCGGACATGCAGAGGTACGCGGAGGCCCGATTTTACTGGACGA
CCGCGTGCTGATTGAAGGCCATGCCTGTATACAGGGCGAAATTCTGATTGAGCACCAGGTCGAGATTAGCGGACGGGCGG
CGGTGATAGCGTTTGACGGCAATACTATTCACCTGCGCGGCCCAAAAGTGATCAATGGCGAGGATCGTATTACGCGTACC
CCCTTAGTCGGTTCCCTTTAA

Upstream 100 bases:

>100_bases
TAATTTATAAAGTATATTTTAAATGCATTTTATGGAATTTCTGGTTGTTTCGCCAGTACCTTTGCTACGGTTATCTTAAT
CGTTCACACGGAATTTCCCT

Downstream 100 bases:

>100_bases
TCCGTATCAATAATGCGGGCATACATATTAACGTCGTGATAGACGCCGTTAAGATACTCTGCCTGTTTCATACAGCCTTC
CAGCGTAAAATGGTTGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTKYRLSEEPRAFTYQVDGEKKSVLLRQVIAVTDFNDVKAGTSGGWVDADNVLSQQGDCWIYDENAMAFAGTEITGNARI
TQPCTLYNNVRIGDNVWIDRADISDGARIGDNVTIQSSSVRGECAIYGDARVLNQSEILAVQGLTHEHAQILQIYDRATL
SHSRIVHQVQLYGDATITHAFIEHRAEVFDFALIEGNKDNNVWICDCAKVYGHARVIAGTAEDAIPTLRYSSQVAEHALI
EGNCVLKHHVLVGGHAEVRGGPILLDDRVLIEGHACIQGEILIEHQVEISGRAAVIAFDGNTIHLRGPKVINGEDRITRT
PLVGSL

Sequences:

>Translated_326_residues
MTKYRLSEEPRAFTYQVDGEKKSVLLRQVIAVTDFNDVKAGTSGGWVDADNVLSQQGDCWIYDENAMAFAGTEITGNARI
TQPCTLYNNVRIGDNVWIDRADISDGARIGDNVTIQSSSVRGECAIYGDARVLNQSEILAVQGLTHEHAQILQIYDRATL
SHSRIVHQVQLYGDATITHAFIEHRAEVFDFALIEGNKDNNVWICDCAKVYGHARVIAGTAEDAIPTLRYSSQVAEHALI
EGNCVLKHHVLVGGHAEVRGGPILLDDRVLIEGHACIQGEILIEHQVEISGRAAVIAFDGNTIHLRGPKVINGEDRITRT
PLVGSL
>Mature_325_residues
TKYRLSEEPRAFTYQVDGEKKSVLLRQVIAVTDFNDVKAGTSGGWVDADNVLSQQGDCWIYDENAMAFAGTEITGNARIT
QPCTLYNNVRIGDNVWIDRADISDGARIGDNVTIQSSSVRGECAIYGDARVLNQSEILAVQGLTHEHAQILQIYDRATLS
HSRIVHQVQLYGDATITHAFIEHRAEVFDFALIEGNKDNNVWICDCAKVYGHARVIAGTAEDAIPTLRYSSQVAEHALIE
GNCVLKHHVLVGGHAEVRGGPILLDDRVLIEGHACIQGEILIEHQVEISGRAAVIAFDGNTIHLRGPKVINGEDRITRTP
LVGSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1787698, Length=326, Percent_Identity=65.6441717791411, Blast_Score=447, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35731; Mature: 35599

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYRLSEEPRAFTYQVDGEKKSVLLRQVIAVTDFNDVKAGTSGGWVDADNVLSQQGDCW
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHCCCCEE
IYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADISDGARIGDNVTIQSSSV
EEECCCEEEEEEEEECCCEECCCEEEECCEEECCCEEEEECCCCCCCCCCCEEEEEECCC
RGECAIYGDARVLNQSEILAVQGLTHEHAQILQIYDRATLSHSRIVHQVQLYGDATITHA
CCEEEEEECEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCHHHEEEEEEEECCCHHHHH
FIEHRAEVFDFALIEGNKDNNVWICDCAKVYGHARVIAGTAEDAIPTLRYSSQVAEHALI
HHHHHHHHEEEEEEECCCCCCEEEEEEHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHEE
EGNCVLKHHVLVGGHAEVRGGPILLDDRVLIEGHACIQGEILIEHQVEISGRAAVIAFDG
CCCEEEEEEEEECCCCEECCCCEEEECEEEEECCEEEEEEEEEEEEEEECCCEEEEEECC
NTIHLRGPKVINGEDRITRTPLVGSL
CEEEEECCEEECCCCCEEECCCCCCC
>Mature Secondary Structure 
TKYRLSEEPRAFTYQVDGEKKSVLLRQVIAVTDFNDVKAGTSGGWVDADNVLSQQGDCW
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHCCCCEE
IYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADISDGARIGDNVTIQSSSV
EEECCCEEEEEEEEECCCEECCCEEEECCEEECCCEEEEECCCCCCCCCCCEEEEEECCC
RGECAIYGDARVLNQSEILAVQGLTHEHAQILQIYDRATLSHSRIVHQVQLYGDATITHA
CCEEEEEECEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCHHHEEEEEEEECCCHHHHH
FIEHRAEVFDFALIEGNKDNNVWICDCAKVYGHARVIAGTAEDAIPTLRYSSQVAEHALI
HHHHHHHHEEEEEEECCCCCCEEEEEEHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHEE
EGNCVLKHHVLVGGHAEVRGGPILLDDRVLIEGHACIQGEILIEHQVEISGRAAVIAFDG
CCCEEEEEEEEECCCCEECCCCEEEECEEEEECCEEEEEEEEEEEEEEECCCEEEEEECC
NTIHLRGPKVINGEDRITRTPLVGSL
CEEEEECCEEECCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]