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The map label for this gene is sgcX [H]

Identifier: 194734384

GI number: 194734384

Start: 1672518

End: 1673636

Strand: Direct

Name: sgcX [H]

Synonym: SeSA_A1729

Alternate gene names: 194734384

Gene position: 1672518-1673636 (Clockwise)

Preceding gene: 194736675

Following gene: 194735076

Centisome position: 35.52

GC content: 55.76

Gene sequence:

>1119_bases
ATGACCTTTTCTGTGCAGGAAACGCTTTTTTCTTTACTGCGGCTAAACGGGATTTCAGGACATGAAAGCAGTATTGCAAA
CGTTATGCAGCACGCGTTTGAACAGCAGGCCAAAGACGTCTGGCGGGATCGCCTGGGCAATGTCGTCGCCCGTTATGGCA
GCGATAAATCCGACGCGCTTCGCCTGATGATTTTTGCGCATATGGATGAAGTGGGTTTTATGGTACGCAAGATCGAACCC
TCCGGTTTTTTACGTTTTGAACGCGTGGGCGGCCCGGCGCAAATTACTATGCCCGGTTCGATTGTGACGCTTGCCGGACG
TTCAGGCGATATCATGGGCTGTATCGGTATTAAAGCATATCACTTCGCGAAGGGTGACGAGCGCACCCAGCCTCCCGCTC
TCGATAAACTCTGGATTGATATCGGCGCAAAAGATAAAGCGGATGCCGAACGAATGGGTATTCAGGTGGGGACGCCAGTA
ACCCTTTACAACCCGCCGCACTGTCTGGGCAACGACCTGGTATGCAGTAAGGCGCTGGATGACAGGCTGGGGTGTACGGC
GCTACTGGGCGTCGCCGAGGCCCTCGCCTCCACACCGCTCGATATCGCGGTATTCCTGGTCGCGTCGGTGCAGGAAGAGT
TCAATATTCGCGGCATTATTCCCGTTTTACGACGCGTGCGCCCCGACCTGGCGATTGGTATTGATATCACCCCATCCTGC
GACACGCCTGACCTGCAGGATTACTCGGATGTGCGGGTCAACCACGGCGTCGGCATCACCTGTCTGAACTATCACGGACG
CGGTACGTTGGCGGGACTGATTACGCCGCCGCGTTTGCTGCGGATGCTGGAGACCACCGCGCACGAAAATAATATTCCCG
TACAGCGAGAAGTCGCGCCAGGCGTCATCACCGAAACCGGCTACATTCAGGTTGAACTGGACGGTATTCCCTGCGCCAGC
CTTTCTATTCCTTGCCGCTATACCCACTCGCCAGCCGAAGTCGCCAGCCTGCGCGACCTGACTGATTGTATCCGTTTACT
GACTGCGCTGGCCAATATGTCGCCAGAACAGTTTCCCATTGAGCCTGAAACAGGCGCTACACAAGAGGCACGACCATGA

Upstream 100 bases:

>100_bases
TATTTAGCGTATTTCCGCGTGACACATTTCACACTTATCCAACCATTCTCCGCCTATAAAACGCTCAACGACTGATTGTT
TTATCACCACGGAGACGCCA

Downstream 100 bases:

>100_bases
TGAAAAAGATCCTTGTGGCATGTGGTACCGGCATGTCGACATCAACCATGATTGCACAAAAATTGCAGGACTTTCTTGCG
GAGCAAGGCATTGCGGCAAC

Product: putative sgc region protein SgcX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTFSVQETLFSLLRLNGISGHESSIANVMQHAFEQQAKDVWRDRLGNVVARYGSDKSDALRLMIFAHMDEVGFMVRKIEP
SGFLRFERVGGPAQITMPGSIVTLAGRSGDIMGCIGIKAYHFAKGDERTQPPALDKLWIDIGAKDKADAERMGIQVGTPV
TLYNPPHCLGNDLVCSKALDDRLGCTALLGVAEALASTPLDIAVFLVASVQEEFNIRGIIPVLRRVRPDLAIGIDITPSC
DTPDLQDYSDVRVNHGVGITCLNYHGRGTLAGLITPPRLLRMLETTAHENNIPVQREVAPGVITETGYIQVELDGIPCAS
LSIPCRYTHSPAEVASLRDLTDCIRLLTALANMSPEQFPIEPETGATQEARP

Sequences:

>Translated_372_residues
MTFSVQETLFSLLRLNGISGHESSIANVMQHAFEQQAKDVWRDRLGNVVARYGSDKSDALRLMIFAHMDEVGFMVRKIEP
SGFLRFERVGGPAQITMPGSIVTLAGRSGDIMGCIGIKAYHFAKGDERTQPPALDKLWIDIGAKDKADAERMGIQVGTPV
TLYNPPHCLGNDLVCSKALDDRLGCTALLGVAEALASTPLDIAVFLVASVQEEFNIRGIIPVLRRVRPDLAIGIDITPSC
DTPDLQDYSDVRVNHGVGITCLNYHGRGTLAGLITPPRLLRMLETTAHENNIPVQREVAPGVITETGYIQVELDGIPCAS
LSIPCRYTHSPAEVASLRDLTDCIRLLTALANMSPEQFPIEPETGATQEARP
>Mature_371_residues
TFSVQETLFSLLRLNGISGHESSIANVMQHAFEQQAKDVWRDRLGNVVARYGSDKSDALRLMIFAHMDEVGFMVRKIEPS
GFLRFERVGGPAQITMPGSIVTLAGRSGDIMGCIGIKAYHFAKGDERTQPPALDKLWIDIGAKDKADAERMGIQVGTPVT
LYNPPHCLGNDLVCSKALDDRLGCTALLGVAEALASTPLDIAVFLVASVQEEFNIRGIIPVLRRVRPDLAIGIDITPSCD
TPDLQDYSDVRVNHGVGITCLNYHGRGTLAGLITPPRLLRMLETTAHENNIPVQREVAPGVITETGYIQVELDGIPCASL
SIPCRYTHSPAEVASLRDLTDCIRLLTALANMSPEQFPIEPETGATQEARP

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI87082417, Length=372, Percent_Identity=84.4086021505376, Blast_Score=654, Evalue=0.0,
Organism=Escherichia coli, GI1790332, Length=343, Percent_Identity=28.8629737609329, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1788727, Length=342, Percent_Identity=29.2397660818713, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 40453; Mature: 40322

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSVQETLFSLLRLNGISGHESSIANVMQHAFEQQAKDVWRDRLGNVVARYGSDKSDAL
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHE
RLMIFAHMDEVGFMVRKIEPSGFLRFERVGGPAQITMPGSIVTLAGRSGDIMGCIGIKAY
EEHHHHHHHHHHHEEEEECCCCCEEEEECCCCEEEEECCCEEEEECCCCCEEEEECCEEE
HFAKGDERTQPPALDKLWIDIGAKDKADAERMGIQVGTPVTLYNPPHCLGNDLVCSKALD
EECCCCCCCCCCCCCEEEEECCCCCCCCHHHCCEEECCCEEECCCCCCCCCCHHHHHHHH
DRLGCTALLGVAEALASTPLDIAVFLVASVQEEFNIRGIIPVLRRVRPDLAIGIDITPSC
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECCCC
DTPDLQDYSDVRVNHGVGITCLNYHGRGTLAGLITPPRLLRMLETTAHENNIPVQREVAP
CCCCCCCCCCEEEECCCEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
GVITETGYIQVELDGIPCASLSIPCRYTHSPAEVASLRDLTDCIRLLTALANMSPEQFPI
CEEECCCEEEEEECCCCCCCEECCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EPETGATQEARP
CCCCCCCCCCCC
>Mature Secondary Structure 
TFSVQETLFSLLRLNGISGHESSIANVMQHAFEQQAKDVWRDRLGNVVARYGSDKSDAL
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHE
RLMIFAHMDEVGFMVRKIEPSGFLRFERVGGPAQITMPGSIVTLAGRSGDIMGCIGIKAY
EEHHHHHHHHHHHEEEEECCCCCEEEEECCCCEEEEECCCEEEEECCCCCEEEEECCEEE
HFAKGDERTQPPALDKLWIDIGAKDKADAERMGIQVGTPVTLYNPPHCLGNDLVCSKALD
EECCCCCCCCCCCCCEEEEECCCCCCCCHHHCCEEECCCEEECCCCCCCCCCHHHHHHHH
DRLGCTALLGVAEALASTPLDIAVFLVASVQEEFNIRGIIPVLRRVRPDLAIGIDITPSC
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECCCC
DTPDLQDYSDVRVNHGVGITCLNYHGRGTLAGLITPPRLLRMLETTAHENNIPVQREVAP
CCCCCCCCCCEEEECCCEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
GVITETGYIQVELDGIPCASLSIPCRYTHSPAEVASLRDLTDCIRLLTALANMSPEQFPI
CEEECCCEEEEEECCCCCCCEECCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EPETGATQEARP
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]