Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is 194736503
Identifier: 194736503
GI number: 194736503
Start: 1302987
End: 1304030
Strand: Direct
Name: 194736503
Synonym: SeSA_A1340
Alternate gene names: NA
Gene position: 1302987-1304030 (Clockwise)
Preceding gene: 194736481
Following gene: 194736106
Centisome position: 27.67
GC content: 50.77
Gene sequence:
>1044_bases ATGAAATTAGCGCTCGTCAATCGGCAGGTCATTTTACCGGAAAGCGGAACCGAGTTCTTCCAGTGCCATGCCTCTACGCT TGTTCGCTTACCGTGCGGTACGCTCGTGGCCGCATGGTTCGCGGGGTTGCGCGAAGGAAGCGAAGATACAGCCATCTGGC TATCTCGCTATGAACATAATATCTGGACAACACCGCAGCGAGTGGCGGCACGCGAGGGGGAAGCGCACTGGAATCCGGTG TTATTTTACCCGTCGGATAAATTGTGGTTATTTTATAAAGTAGGCAGCGACGTACACGTGTGGAAAACCTGGTTTATCAC CTCCAGCGATCGAGGATTTACCTGGAGTACGCCAGCTCCGTTGGTCAACGATGATATTTTGCCGCGCGGTCCCGTGAAAA ATAAACTCCTGCTGGCATCAAATGGTGCCTGGATTGCGCCAGGGTCGATTGAAAGTCCTGAACGGTGGAGGGCATTTGTG GATCGATCCTCTGACGAAGGAAAACACTGGAATATCTCTTTTGTTCCACTGGAGGCTGATAACGCTATTCCCGGGACAAA CGTAGCGTTGTGGGATGGTGTAAAAAAGGGGATGTTGTGGGAATGTTGTCTGGAAAACCTCCTGCGCTGGGATGGCGTTA TTCAGCCTACGCTGTGGGAGTCTTCTCCGGGGCATATCCATATGTTGTTACGAAGCACACGCGGGGCAATTTTTCGCAGT GATTCAATCGACTATGGCGCTACCTGGTCTGTTGCCCGCGCGACATCTTTACCGAATAATAATAGTGGTATCGATCTGGT TAGTATGCCGGACGGTACGCTGATTCTTGCGTTAAATCCGGTCAACGGCAACTGGGGAAAGCGCTATCCGCTTTCACTGA TTGCTTCCCAGGATAATGGCGAATCATGGCTACCGCTACTGGACCTGGAAAGTGACCACGGTGAGTATTCTTATCCCGCT ATTATTAGCGAGGGCGGCGTCGTACATATCACCTACACATGGAACCGGAAAAATATCGTATATTGTCGATTACAAACGGT GTAA
Upstream 100 bases:
>100_bases TAGCGGTTCATCGTTTTCACCGCGTTGATGCTATTTCTGCTAACACTACTTTCATACGTAAAAAAGCTGATGCTTTTTAC CTTATTTAATAGAGGCAGGT
Downstream 100 bases:
>100_bases GGCGCTATCAGTCGAAACCGATAGCGCTGGAATAATAATGCCTTGCCCGGCGTGCTCTCTCACGCCGGGATGGCCGAAAT AGTCATGATTTACCGGGTAA
Product: putative cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKLALVNRQVILPESGTEFFQCHASTLVRLPCGTLVAAWFAGLREGSEDTAIWLSRYEHNIWTTPQRVAAREGEAHWNPV LFYPSDKLWLFYKVGSDVHVWKTWFITSSDRGFTWSTPAPLVNDDILPRGPVKNKLLLASNGAWIAPGSIESPERWRAFV DRSSDEGKHWNISFVPLEADNAIPGTNVALWDGVKKGMLWECCLENLLRWDGVIQPTLWESSPGHIHMLLRSTRGAIFRS DSIDYGATWSVARATSLPNNNSGIDLVSMPDGTLILALNPVNGNWGKRYPLSLIASQDNGESWLPLLDLESDHGEYSYPA IISEGGVVHITYTWNRKNIVYCRLQTV
Sequences:
>Translated_347_residues MKLALVNRQVILPESGTEFFQCHASTLVRLPCGTLVAAWFAGLREGSEDTAIWLSRYEHNIWTTPQRVAAREGEAHWNPV LFYPSDKLWLFYKVGSDVHVWKTWFITSSDRGFTWSTPAPLVNDDILPRGPVKNKLLLASNGAWIAPGSIESPERWRAFV DRSSDEGKHWNISFVPLEADNAIPGTNVALWDGVKKGMLWECCLENLLRWDGVIQPTLWESSPGHIHMLLRSTRGAIFRS DSIDYGATWSVARATSLPNNNSGIDLVSMPDGTLILALNPVNGNWGKRYPLSLIASQDNGESWLPLLDLESDHGEYSYPA IISEGGVVHITYTWNRKNIVYCRLQTV >Mature_347_residues MKLALVNRQVILPESGTEFFQCHASTLVRLPCGTLVAAWFAGLREGSEDTAIWLSRYEHNIWTTPQRVAAREGEAHWNPV LFYPSDKLWLFYKVGSDVHVWKTWFITSSDRGFTWSTPAPLVNDDILPRGPVKNKLLLASNGAWIAPGSIESPERWRAFV DRSSDEGKHWNISFVPLEADNAIPGTNVALWDGVKKGMLWECCLENLLRWDGVIQPTLWESSPGHIHMLLRSTRGAIFRS DSIDYGATWSVARATSLPNNNSGIDLVSMPDGTLILALNPVNGNWGKRYPLSLIASQDNGESWLPLLDLESDHGEYSYPA IISEGGVVHITYTWNRKNIVYCRLQTV
Specific function: Unknown
COG id: COG4692
COG function: function code G; Predicted neuraminidase (sialidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38973; Mature: 38973
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLALVNRQVILPESGTEFFQCHASTLVRLPCGTLVAAWFAGLREGSEDTAIWLSRYEHN CEEEEECCEEEECCCCCHHEEEECCEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCC IWTTPQRVAAREGEAHWNPVLFYPSDKLWLFYKVGSDVHVWKTWFITSSDRGFTWSTPAP CCCCHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEEEEEECCCCEEECCCCC LVNDDILPRGPVKNKLLLASNGAWIAPGSIESPERWRAFVDRSSDEGKHWNISFVPLEAD CCCCCCCCCCCCCCEEEEECCCCEECCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEECC NAIPGTNVALWDGVKKGMLWECCLENLLRWDGVIQPTLWESSPGHIHMLLRSTRGAIFRS CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCEEEC DSIDYGATWSVARATSLPNNNSGIDLVSMPDGTLILALNPVNGNWGKRYPLSLIASQDNG CCCCCCCEEEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCC ESWLPLLDLESDHGEYSYPAIISEGGVVHITYTWNRKNIVYCRLQTV CCCCEEEEECCCCCCEECCEEEECCCEEEEEEEECCCEEEEEEEEEC >Mature Secondary Structure MKLALVNRQVILPESGTEFFQCHASTLVRLPCGTLVAAWFAGLREGSEDTAIWLSRYEHN CEEEEECCEEEECCCCCHHEEEECCEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCC IWTTPQRVAAREGEAHWNPVLFYPSDKLWLFYKVGSDVHVWKTWFITSSDRGFTWSTPAP CCCCHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEEEEEECCCCEEECCCCC LVNDDILPRGPVKNKLLLASNGAWIAPGSIESPERWRAFVDRSSDEGKHWNISFVPLEAD CCCCCCCCCCCCCCEEEEECCCCEECCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEECC NAIPGTNVALWDGVKKGMLWECCLENLLRWDGVIQPTLWESSPGHIHMLLRSTRGAIFRS CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCEEEC DSIDYGATWSVARATSLPNNNSGIDLVSMPDGTLILALNPVNGNWGKRYPLSLIASQDNG CCCCCCCEEEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCC ESWLPLLDLESDHGEYSYPAIISEGGVVHITYTWNRKNIVYCRLQTV CCCCEEEEECCCCCCEECCEEEECCCEEEEEEEECCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA