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The map label for this gene is xp55 [H]

Identifier: 194736106

GI number: 194736106

Start: 1305788

End: 1307422

Strand: Direct

Name: xp55 [H]

Synonym: SeSA_A1345

Alternate gene names: 194736106

Gene position: 1305788-1307422 (Clockwise)

Preceding gene: 194736503

Following gene: 194736299

Centisome position: 27.73

GC content: 53.7

Gene sequence:

>1635_bases
ATGCTGCGCCGGGAGGAACAAAAACAACGTATAATCTGGGGTAAACTGATGATTAAAGGCAAACTGGCGCTCATAACGTG
CGCGATGGCTCTGGCATTCACCTCGCCGCTTTTCGCCGCGTCGGACACGGCAGATGGCCATACCTTAAAGCTGGCCATTG
GCCCTGAGCCAACGGAAGGCTTTGATCCTATGCTGGGCTGGAGCCACGGCAGTTACTTATTGCTTCATGCGCCGTTGCTC
AAGCAAAACGCCGATATGAGTTGGGGTAATTTACTGACGGAAAAAGTGGACACCAGCCCCGATGGTAAAACCTGGATACT
GACCTTAAAACCCGATCTGAAATTCTCCGATGGCTCGCCATTAACTGCCGAAGATGTCGTTTTTACATATAACAAAGCGG
CGAAGAGCGGCGGTAAAATTGACATGGGCAACTTTAGTCATGCGCGAGCGCTGGATGCGCGCCGAATTGAGATGACGCTG
AGCCATCCGCAGAGTACCTTTGTGAATGTACTCGGGTCGTTAGGGATTGTTCCGGCCAGCCGTTATGATGAAAAAACGTT
TGCCCGCGAACCGATAGGCGCCGGTCCGTACCGACTGGTCAGTTTCCAGCCTGGTCAGCAACTGATTGTTGAAGCCAACC
CCTGGTATGCAGGTAAAAAGAATGACTTTAACCGGCTGGTTTTTGTCTTCCTGGATGAAGATAATGCTTATGCCGCCGCG
CGCAGCGGACAGTTGGGACTGGTGCGCATTGCCCCTTCTATGGCGGTGGCTCCGCAGCAGGATAATCTTAAACTCTGGGT
ACGCGATAGCGTTGAAAACCGGGGCATAGTCTTCCCGATGGTGCCAGCCGGTAAAAAGGATGCTAACGGTTATCCTGTCG
GCAACGATGTGACCGCTGATGTCGCTATCAGACGCGCAATTAACTATGCCATTAATCGTAAGCAACTAGCGGAACAGGTG
ATGGAAGGCCATGCGATACCCGCCTATAGCGCGGTGCAGGGATTGCCGTGGCAAAATCCTTCAGTGGTATTCAGCGATGG
CGATATTGCAAAAGCGCGCGCCATCCTGGAAGAGGCTGGCTGGAAGATAAACAGTGCGGGCGTGCGTGAAAAAGCAGGTA
AAGAAGCGCGTCTGACCTTATGGTATGCCAGTGGCGACAGCACCCGGCGGGATCTGGCCGAGGCGGTGCGCGCCATGTTG
CAGCCTTTAGGCATTGTCGTCTCGTTGCAATCGGGAAGCTGGGAAACCGTAGAGCGCCATATGCACGCTAACCCTACGCT
GTTTGGCTGGGGAAGTCTGGACCCGATGGAACTCTTCCATCACTACAGCGGGAAAGCCGCTGGTGTGGAATATTATAACC
CGGGCTATTACAGCAACCCTGCGGTAGAAGCACATCTGAAACAGGCTATAGATGCGCCTGACTGGCAAAAGGCGATTCCT
TTCTGGCAGCAGGTTGAGTGGGATGGAAAGCAGGGCGCGGGCGTTCAGGGCGATGCGGCATGGGCATGGCTGCTTAATAT
TCAGCATACCTATTTGGCCAACCCTTGTATTGATCTGGGGAAAGGCGCGCCAGAAATCCACGGTAGCTGGTCGGTGTTAA
ACAATCTTGATGACTGGACCTGGACCTGTCGGTGA

Upstream 100 bases:

>100_bases
TATGATGTTTTTAAAAGATCGTCATACTTTCTGTTCTGCATCAATTTTTTCATTACAAATGCTCGCCATAATGCCGTCCT
CAGGAGGCCTCCCGACGTTT

Downstream 100 bases:

>100_bases
TGAAATTGTTCTTCAGCCATTTTTTGCGGCTGATTATTCTGTTGGTGCTGGTGGCTGCCGGCACCTTCATTTTGCTCAGC
TTTTCGCCCGTTGATCCTAT

Product: nickel ABC transporter periplasmic nickel-binding protein

Products: Ni2; [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MLRREEQKQRIIWGKLMIKGKLALITCAMALAFTSPLFAASDTADGHTLKLAIGPEPTEGFDPMLGWSHGSYLLLHAPLL
KQNADMSWGNLLTEKVDTSPDGKTWILTLKPDLKFSDGSPLTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTL
SHPQSTFVNVLGSLGIVPASRYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
RSGQLGLVRIAPSMAVAPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANGYPVGNDVTADVAIRRAINYAINRKQLAEQV
MEGHAIPAYSAVQGLPWQNPSVVFSDGDIAKARAILEEAGWKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAML
QPLGIVVSLQSGSWETVERHMHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGAPEIHGSWSVLNNLDDWTWTCR

Sequences:

>Translated_544_residues
MLRREEQKQRIIWGKLMIKGKLALITCAMALAFTSPLFAASDTADGHTLKLAIGPEPTEGFDPMLGWSHGSYLLLHAPLL
KQNADMSWGNLLTEKVDTSPDGKTWILTLKPDLKFSDGSPLTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTL
SHPQSTFVNVLGSLGIVPASRYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
RSGQLGLVRIAPSMAVAPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANGYPVGNDVTADVAIRRAINYAINRKQLAEQV
MEGHAIPAYSAVQGLPWQNPSVVFSDGDIAKARAILEEAGWKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAML
QPLGIVVSLQSGSWETVERHMHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGAPEIHGSWSVLNNLDDWTWTCR
>Mature_544_residues
MLRREEQKQRIIWGKLMIKGKLALITCAMALAFTSPLFAASDTADGHTLKLAIGPEPTEGFDPMLGWSHGSYLLLHAPLL
KQNADMSWGNLLTEKVDTSPDGKTWILTLKPDLKFSDGSPLTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTL
SHPQSTFVNVLGSLGIVPASRYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
RSGQLGLVRIAPSMAVAPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANGYPVGNDVTADVAIRRAINYAINRKQLAEQV
MEGHAIPAYSAVQGLPWQNPSVVFSDGDIAKARAILEEAGWKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAML
QPLGIVVSLQSGSWETVERHMHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGAPEIHGSWSVLNNLDDWTWTCR

Specific function: Required for transport of an unidentified substrate [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789887, Length=353, Percent_Identity=26.0623229461756, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1787762, Length=448, Percent_Identity=25.6696428571429, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1787052, Length=436, Percent_Identity=22.7064220183486, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1789966, Length=474, Percent_Identity=22.1518987341772, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 59923; Mature: 59923

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRREEQKQRIIWGKLMIKGKLALITCAMALAFTSPLFAASDTADGHTLKLAIGPEPTEG
CCCCHHHHHHEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCC
FDPMLGWSHGSYLLLHAPLLKQNADMSWGNLLTEKVDTSPDGKTWILTLKPDLKFSDGSP
CCCCCCCCCCCEEEEECHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCC
LTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTLSHPQSTFVNVLGSLGIVPAS
CCHHCEEEEECHHHCCCCCEECCCCCHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCC
RYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
CCCCHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEE
RSGQLGLVRIAPSMAVAPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANGYPVGNDVTAD
CCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHH
VAIRRAINYAINRKQLAEQVMEGHAIPAYSAVQGLPWQNPSVVFSDGDIAKARAILEEAG
HHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHC
WKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAMLQPLGIVVSLQSGSWETVERH
CEECCCCCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
MHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
HCCCCCEEECCCCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHCC
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGAPEIHGSWSVLNNLDDWT
HHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHCCCCHHHCCCCCCCCCCHHHHCCCCCCE
WTCR
EEEC
>Mature Secondary Structure
MLRREEQKQRIIWGKLMIKGKLALITCAMALAFTSPLFAASDTADGHTLKLAIGPEPTEG
CCCCHHHHHHEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCC
FDPMLGWSHGSYLLLHAPLLKQNADMSWGNLLTEKVDTSPDGKTWILTLKPDLKFSDGSP
CCCCCCCCCCCEEEEECHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCC
LTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTLSHPQSTFVNVLGSLGIVPAS
CCHHCEEEEECHHHCCCCCEECCCCCHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCC
RYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
CCCCHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEE
RSGQLGLVRIAPSMAVAPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANGYPVGNDVTAD
CCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHH
VAIRRAINYAINRKQLAEQVMEGHAIPAYSAVQGLPWQNPSVVFSDGDIAKARAILEEAG
HHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHC
WKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAMLQPLGIVVSLQSGSWETVERH
CEECCCCCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
MHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
HCCCCCEEECCCCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHCC
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGAPEIHGSWSVLNNLDDWT
HHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHCCCCHHHCCCCCCCCCCHHHHCCCCCCE
WTCR
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ni2; [Periplasm]; ATP; H2O [C]

Specific reaction: Ni2+ [Periplasm] + ATP + H2O = Ni2+ [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]