Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
---|---|
Accession | NC_011094 |
Length | 4,709,075 |
Click here to switch to the map view.
The map label for this gene is flgK
Identifier: 194736355
GI number: 194736355
Start: 1223773
End: 1225434
Strand: Direct
Name: flgK
Synonym: SeSA_A1251
Alternate gene names: 194736355
Gene position: 1223773-1225434 (Clockwise)
Preceding gene: 194738323
Following gene: 194736765
Centisome position: 25.99
GC content: 51.68
Gene sequence:
>1662_bases ATGTCCAGCTTGATTAATCACGCCATGAGCGGACTTAACGCCGCGCAGGCCGCGTTAAATACGGTCAGTAATAACATCAA CAATTATAACGTTGCGGGTTATACCCGGCAGACAACTATTCTGGCGCAGGCAAACAGTACGTTAGGGGCTGGCGGCTGGA TAGGTAATGGCGTTTACGTTTCAGGCGTACAGCGCGAATATGATGCGTTTATCACTAATCAGCTACGCGGCGCGCAAAAC CAGAGCAGCGGCTTGACCACGCGCTATGAACAAATGTCGAAAATCGACAACCTGCTGGCCGATAAATCCAGCTCACTGTC TGGTTCGTTGCAGAGTTTTTTTACCAGCCTGCAAACGTTAGTCAGTAACGCGGAAGATCCTGCGGCGCGTCAGGCGCTGA TTGGTAAAGCGGAAGGGCTGGTAAACCAGTTCAAAACCACCGATCAGTATCTGCGCGATCAGGATAAACAGGTCAATATC GCGATTGGCTCCAGCGTGGCGCAAATCAACAATTACGCGAAGCAGATAGCTAACCTGAACGATCAAATCTCCCGTATGAC GGGCGTAGGCGCGGGCGCATCGCCGAACGACCTGCTCGATCAGCGTGATCAGTTGGTCAGCGAGCTTAACAAGATCGTTG GCGTCGAGGTGAGTGTACAGGACGGCGGCACCTATAACCTGACGATGGCCAATGGCTATACGCTGGTGCAGGGGTCGACG GCGCGTCAGTTGGCGGCGGTTCCCTCCAGCGCCGACCCGACGCGAACGACTGTCGCTTATGTCGATGAGGCCGCCGGTAA CATCGAAATTCCGGAAAAGTTGCTGAACACCGGTTCGCTCGGCGGATTACTGACATTCCGTTCTCAGGATCTGGATCAGA CTCGTAATACGCTGGGCCAGTTGGCGTTAGCGTTTGCCGATGCGTTTAACGCGCAGCATACCAAAGGTTATGACGCCGAC GGCAATAAAGGGAAAGACTTCTTTAGCATTGGCTCGCCGGTGGTATATAGCAACAGTAATAATGCCGATAAAACGGTATC GCTAACCGCTAAGGTGGTCGACAGCACGAAGGTTCAGGCGACGGATTATAAGATTGTTTTTGACGGTACAGACTGGCAGG TTACTCGCACTGCGGATAACACTACCTTCACGGCGACAAAAGATGCTGACGGAAAACTGGAGATTGACGGTCTGAAAGTG ACGGTAGGGACCGGCGCACAGAAAAACGACAGTTTTCTTCTCAAGCCGGTCAGCAATGCTATCGTCGACATGAACGTTAA AGTGACAAATGAAGCCGAGATTGCGATGGCGTCTGAGTCAAAACTCGATCCTGATGTGGATACCGGCGACAGCGATAACC GCAATGGTCAGGCATTGCTGGACTTACAAAACAGCAATGTAGTGGGCGGCAACAAAACCTTTAACGATGCTTACGCCACG TTGGTCAGCGATGTGGGTAACAAAACGTCAACGCTGAAAACCAGCAGCACCACGCAGGCGAATGTGGTTAAACAGCTTTA TAAACAGCAACAGTCGGTTTCCGGCGTTAACCTCGACGAAGAGTACGGCAATTTGCAGCGTTATCAGCAGTATTATCTGG CGAATGCGCAAGTATTGCAGACCGCGAATGCGCTGTTTGATGCGTTACTGAATATTCGCTAA
Upstream 100 bases:
>100_bases AAAACCTACAGCGCGAATCTCGACAATCTCTTTTAAATTGCTCAAGTCCACGTAGTCGCTGCCGATAACAACGAGTATTG AAGGATTAAAAGGAACCATC
Downstream 100 bases:
>100_bases AGGAGAAGGATGACATGCGTATCAGTACCCAGATGATGTACGAACAAAATATGAGCGGCATCACTAATTCTCAGGCCGAA TGGATGAAGCTGGGCGAGCA
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYVSGVQREYDAFITNQLRGAQN QSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKQVNI AIGSSVAQINNYAKQIANLNDQISRMTGVGAGASPNDLLDQRDQLVSELNKIVGVEVSVQDGGTYNLTMANGYTLVQGST ARQLAAVPSSADPTRTTVAYVDEAAGNIEIPEKLLNTGSLGGLLTFRSQDLDQTRNTLGQLALAFADAFNAQHTKGYDAD GNKGKDFFSIGSPVVYSNSNNADKTVSLTAKVVDSTKVQATDYKIVFDGTDWQVTRTADNTTFTATKDADGKLEIDGLKV TVGTGAQKNDSFLLKPVSNAIVDMNVKVTNEAEIAMASESKLDPDVDTGDSDNRNGQALLDLQNSNVVGGNKTFNDAYAT LVSDVGNKTSTLKTSSTTQANVVKQLYKQQQSVSGVNLDEEYGNLQRYQQYYLANAQVLQTANALFDALLNIR
Sequences:
>Translated_553_residues MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYVSGVQREYDAFITNQLRGAQN QSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKQVNI AIGSSVAQINNYAKQIANLNDQISRMTGVGAGASPNDLLDQRDQLVSELNKIVGVEVSVQDGGTYNLTMANGYTLVQGST ARQLAAVPSSADPTRTTVAYVDEAAGNIEIPEKLLNTGSLGGLLTFRSQDLDQTRNTLGQLALAFADAFNAQHTKGYDAD GNKGKDFFSIGSPVVYSNSNNADKTVSLTAKVVDSTKVQATDYKIVFDGTDWQVTRTADNTTFTATKDADGKLEIDGLKV TVGTGAQKNDSFLLKPVSNAIVDMNVKVTNEAEIAMASESKLDPDVDTGDSDNRNGQALLDLQNSNVVGGNKTFNDAYAT LVSDVGNKTSTLKTSSTTQANVVKQLYKQQQSVSGVNLDEEYGNLQRYQQYYLANAQVLQTANALFDALLNIR >Mature_552_residues SSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYVSGVQREYDAFITNQLRGAQNQ SSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKQVNIA IGSSVAQINNYAKQIANLNDQISRMTGVGAGASPNDLLDQRDQLVSELNKIVGVEVSVQDGGTYNLTMANGYTLVQGSTA RQLAAVPSSADPTRTTVAYVDEAAGNIEIPEKLLNTGSLGGLLTFRSQDLDQTRNTLGQLALAFADAFNAQHTKGYDADG NKGKDFFSIGSPVVYSNSNNADKTVSLTAKVVDSTKVQATDYKIVFDGTDWQVTRTADNTTFTATKDADGKLEIDGLKVT VGTGAQKNDSFLLKPVSNAIVDMNVKVTNEAEIAMASESKLDPDVDTGDSDNRNGQALLDLQNSNVVGGNKTFNDAYATL VSDVGNKTSTLKTSSTTQANVVKQLYKQQQSVSGVNLDEEYGNLQRYQQYYLANAQVLQTANALFDALLNIR
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family
Homologues:
Organism=Escherichia coli, GI1787323, Length=554, Percent_Identity=79.2418772563177, Blast_Score=874, Evalue=0.0,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGK_SALTI (P0A1J6)
Other databases:
- EMBL: AL627269 - EMBL: AE014613 - RefSeq: NP_455676.1 - RefSeq: NP_805512.1 - ProteinModelPortal: P0A1J6 - SMR: P0A1J6 - PRIDE: P0A1J6 - GeneID: 1071376 - GeneID: 1247626 - GenomeReviews: AE014613_GR - GenomeReviews: AL513382_GR - KEGG: stt:t1737 - KEGG: sty:STY1222 - HOGENOM: HBG700702 - OMA: VSQINTY - ProtClustDB: PRK08147 - BioCyc: SENT209261:T1737-MONOMER - BioCyc: SENT220341:STY1222-MONOMER - InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR002371 - PRINTS: PR01005 - TIGRFAMs: TIGR02492
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod
EC number: NA
Molecular weight: Translated: 59110; Mature: 58979
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYV CHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCEEEEEEEEEECCCCCCCCCCCCCCEEE SGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTL ECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKQVNIAIGSSVAQINNYAKQIANLN HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCH DQISRMTGVGAGASPNDLLDQRDQLVSELNKIVGVEVSVQDGGTYNLTMANGYTLVQGST HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECCEEEEECCC ARQLAAVPSSADPTRTTVAYVDEAAGNIEIPEKLLNTGSLGGLLTFRSQDLDQTRNTLGQ HHHHHCCCCCCCCCCEEEEEEHHCCCCCCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHH LALAFADAFNAQHTKGYDADGNKGKDFFSIGSPVVYSNSNNADKTVSLTAKVVDSTKVQA HHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCEEEEEEEECCCCEEEE TDYKIVFDGTDWQVTRTADNTTFTATKDADGKLEIDGLKVTVGTGAQKNDSFLLKPVSNA EEEEEEEECCCEEEEEECCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEEECCCC IVDMNVKVTNEAEIAMASESKLDPDVDTGDSDNRNGQALLDLQNSNVVGGNKTFNDAYAT EEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCHHHHHH LVSDVGNKTSTLKTSSTTQANVVKQLYKQQQSVSGVNLDEEYGNLQRYQQYYLANAQVLQ HHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHH TANALFDALLNIR HHHHHHHHHHCCC >Mature Secondary Structure SSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYV HHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCEEEEEEEEEECCCCCCCCCCCCCCEEE SGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTL ECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKQVNIAIGSSVAQINNYAKQIANLN HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCH DQISRMTGVGAGASPNDLLDQRDQLVSELNKIVGVEVSVQDGGTYNLTMANGYTLVQGST HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECCEEEEECCC ARQLAAVPSSADPTRTTVAYVDEAAGNIEIPEKLLNTGSLGGLLTFRSQDLDQTRNTLGQ HHHHHCCCCCCCCCCEEEEEEHHCCCCCCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHH LALAFADAFNAQHTKGYDADGNKGKDFFSIGSPVVYSNSNNADKTVSLTAKVVDSTKVQA HHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCEEEEEEEECCCCEEEE TDYKIVFDGTDWQVTRTADNTTFTATKDADGKLEIDGLKVTVGTGAQKNDSFLLKPVSNA EEEEEEEECCCEEEEEECCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEEECCCC IVDMNVKVTNEAEIAMASESKLDPDVDTGDSDNRNGQALLDLQNSNVVGGNKTFNDAYAT EEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCHHHHHH LVSDVGNKTSTLKTSSTTQANVVKQLYKQQQSVSGVNLDEEYGNLQRYQQYYLANAQVLQ HHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHH TANALFDALLNIR HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504