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The map label for this gene is ydfJ [H]

Identifier: 194736310

GI number: 194736310

Start: 1552047

End: 1553387

Strand: Direct

Name: ydfJ [H]

Synonym: SeSA_A1609

Alternate gene names: 194736310

Gene position: 1552047-1553387 (Clockwise)

Preceding gene: 194737903

Following gene: 194737678

Centisome position: 32.96

GC content: 50.63

Gene sequence:

>1341_bases
GTGCGCGCTGCCGTATCTGGCTGGTTAGGCACTGCGCTTGAATTTATGGATTTTCAGTTATATTCACTAGGCGCGGCTCT
GGTCTTCCATGAGATATTTTTCCCGGAACAGTCTGCCGCGATGGCGCTTATTCTGGCAATGGGCACCTATGGTGCAGGTT
ATATAGCCAGAATTATCGGCGCCTTTGTTTTTGGTAAAATGGGCGACCGCATCGGACGAAAAAAAGTATTGTTTATTACC
ATCACCATGATGGGGATCTGCACCACGCTGATTGGCGTACTGCCGACGTATGCGCAAATCGGCATTTTTGCGCCAGTATT
ACTGGTGACATTGCGAATTATACAGGGGCTGGGCGCCGGGGCGGAAATTTCCGGCGCGGGTACCATGCTGGCCGAGTATG
CGCCGAAAGGAAAGCGTGGCATCATTTCCTCGCTGGTCGCGATGGGCACCAACTGCGGTACGTTGAGCGCGACGGCGATC
TGGGCGGTGATGTTCTTTGCGCTTGAACGCGAACAACTGATCGCCTGGGGATGGCGTATTCCTTTCCTGGCGAGCGTCGT
TGTCATGATATTCGCGATCTGGCTGCGAATGAATCTGAAAGAAAGCCCGGTATTCGAAAAAGTAAGCGAAGGCGAAAAAT
CGCCAGCGTTAACGCCTGCGTCAGAAAATACATTGGGCGCGATGTTTACCAGCAAATCTTTCTGGCTGGCCACCGGTTTA
CGTTTTGGACAAGCTGGGAATTCGGGGCTTATTCAAACCTTCCTTGCCGGATATTTAGTTCAGACGTTATTATTTAACAA
ATCTATCCCAACCGATGCGTTAATGATAAGTTCCGTAATTGGTTTTATCACTATCCCACTATTAGGGTGGTTGTCCGATA
AATACGGTCGTCGGCTGCCGTATATAATATTGAATATCTCCGCGATTATTCTCGCCTGGCCGATGCTGTCTATTGTGGTA
GATAAAACGTATAGCCCTGGCGTAATTATGGCGGCGCTCATTGTTATTCATAACTTTGCCGTGCTGGGATTATTTGCGCT
GGAAAACATCACCATGGCGGAAATTTTCGGATCGCGTAATCGCTTCACCCGGATGGCGATTTCAAAAGAGGCAGGAGGCC
TGGTGGCGGTTGGCTTTGGCCCCGTCCTCGCAGGAATCTTTTGTAACATGACCGATTCCTGGCTGCCCATCTTAATTATG
CTGGTGCTCTACTCGTGTATTGGTCTGATTTCTGCGCTGTTGATGCCGGAGGTCAGAGATCGCGACCTGAGTTTGCCTGA
GGATGCGGCGGAAGCGACAGCGGCAGAGAAGTTACGCCACTCCGCAACCCAGACGAGTTAA

Upstream 100 bases:

>100_bases
CGAAATAATATAAATAATTGCGAGTAAGTGGTACGCATCTTACCTCTTAGAGATTGCCTATATGACACAAATAAAGCATG
AACGATCGACTCAGGATTTA

Downstream 100 bases:

>100_bases
ATCGTGTCGACGGTATGGCCGGAACGCTAATGCGGTTTCGGCCATGCTGTCCGGTCACTTTTGTTTAATTAGCGTAAATC
CAAATGCACCAGGGCAGGCG

Product: inner membrane metabolite transport protein YdfJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MRAAVSGWLGTALEFMDFQLYSLGAALVFHEIFFPEQSAAMALILAMGTYGAGYIARIIGAFVFGKMGDRIGRKKVLFIT
ITMMGICTTLIGVLPTYAQIGIFAPVLLVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSLVAMGTNCGTLSATAI
WAVMFFALEREQLIAWGWRIPFLASVVVMIFAIWLRMNLKESPVFEKVSEGEKSPALTPASENTLGAMFTSKSFWLATGL
RFGQAGNSGLIQTFLAGYLVQTLLFNKSIPTDALMISSVIGFITIPLLGWLSDKYGRRLPYIILNISAIILAWPMLSIVV
DKTYSPGVIMAALIVIHNFAVLGLFALENITMAEIFGSRNRFTRMAISKEAGGLVAVGFGPVLAGIFCNMTDSWLPILIM
LVLYSCIGLISALLMPEVRDRDLSLPEDAAEATAAEKLRHSATQTS

Sequences:

>Translated_446_residues
MRAAVSGWLGTALEFMDFQLYSLGAALVFHEIFFPEQSAAMALILAMGTYGAGYIARIIGAFVFGKMGDRIGRKKVLFIT
ITMMGICTTLIGVLPTYAQIGIFAPVLLVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSLVAMGTNCGTLSATAI
WAVMFFALEREQLIAWGWRIPFLASVVVMIFAIWLRMNLKESPVFEKVSEGEKSPALTPASENTLGAMFTSKSFWLATGL
RFGQAGNSGLIQTFLAGYLVQTLLFNKSIPTDALMISSVIGFITIPLLGWLSDKYGRRLPYIILNISAIILAWPMLSIVV
DKTYSPGVIMAALIVIHNFAVLGLFALENITMAEIFGSRNRFTRMAISKEAGGLVAVGFGPVLAGIFCNMTDSWLPILIM
LVLYSCIGLISALLMPEVRDRDLSLPEDAAEATAAEKLRHSATQTS
>Mature_446_residues
MRAAVSGWLGTALEFMDFQLYSLGAALVFHEIFFPEQSAAMALILAMGTYGAGYIARIIGAFVFGKMGDRIGRKKVLFIT
ITMMGICTTLIGVLPTYAQIGIFAPVLLVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSLVAMGTNCGTLSATAI
WAVMFFALEREQLIAWGWRIPFLASVVVMIFAIWLRMNLKESPVFEKVSEGEKSPALTPASENTLGAMFTSKSFWLATGL
RFGQAGNSGLIQTFLAGYLVQTLLFNKSIPTDALMISSVIGFITIPLLGWLSDKYGRRLPYIILNISAIILAWPMLSIVV
DKTYSPGVIMAALIVIHNFAVLGLFALENITMAEIFGSRNRFTRMAISKEAGGLVAVGFGPVLAGIFCNMTDSWLPILIM
LVLYSCIGLISALLMPEVRDRDLSLPEDAAEATAAEKLRHSATQTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1788292, Length=418, Percent_Identity=32.5358851674641, Blast_Score=221, Evalue=8e-59,
Organism=Escherichia coli, GI1790550, Length=445, Percent_Identity=28.314606741573, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1789941, Length=324, Percent_Identity=35.4938271604938, Blast_Score=168, Evalue=6e-43,
Organism=Escherichia coli, GI1788942, Length=359, Percent_Identity=31.4763231197772, Blast_Score=141, Evalue=8e-35,
Organism=Escherichia coli, GI87082231, Length=217, Percent_Identity=27.6497695852535, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87082404, Length=362, Percent_Identity=24.3093922651934, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 48100; Mature: 48100

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAAVSGWLGTALEFMDFQLYSLGAALVFHEIFFPEQSAAMALILAMGTYGAGYIARIIG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHH
AFVFGKMGDRIGRKKVLFITITMMGICTTLIGVLPTYAQIGIFAPVLLVTLRIIQGLGAG
HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AEISGAGTMLAEYAPKGKRGIISSLVAMGTNCGTLSATAIWAVMFFALEREQLIAWGWRI
CEECCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
PFLASVVVMIFAIWLRMNLKESPVFEKVSEGEKSPALTPASENTLGAMFTSKSFWLATGL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCC
RFGQAGNSGLIQTFLAGYLVQTLLFNKSIPTDALMISSVIGFITIPLLGWLSDKYGRRLP
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YIILNISAIILAWPMLSIVVDKTYSPGVIMAALIVIHNFAVLGLFALENITMAEIFGSRN
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
RFTRMAISKEAGGLVAVGFGPVLAGIFCNMTDSWLPILIMLVLYSCIGLISALLMPEVRD
HHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
RDLSLPEDAAEATAAEKLRHSATQTS
CCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRAAVSGWLGTALEFMDFQLYSLGAALVFHEIFFPEQSAAMALILAMGTYGAGYIARIIG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHH
AFVFGKMGDRIGRKKVLFITITMMGICTTLIGVLPTYAQIGIFAPVLLVTLRIIQGLGAG
HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AEISGAGTMLAEYAPKGKRGIISSLVAMGTNCGTLSATAIWAVMFFALEREQLIAWGWRI
CEECCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
PFLASVVVMIFAIWLRMNLKESPVFEKVSEGEKSPALTPASENTLGAMFTSKSFWLATGL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCC
RFGQAGNSGLIQTFLAGYLVQTLLFNKSIPTDALMISSVIGFITIPLLGWLSDKYGRRLP
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YIILNISAIILAWPMLSIVVDKTYSPGVIMAALIVIHNFAVLGLFALENITMAEIFGSRN
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
RFTRMAISKEAGGLVAVGFGPVLAGIFCNMTDSWLPILIMLVLYSCIGLISALLMPEVRD
HHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
RDLSLPEDAAEATAAEKLRHSATQTS
CCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]