Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is recG [H]
Identifier: 194735749
GI number: 194735749
Start: 3822043
End: 3824124
Strand: Direct
Name: recG [H]
Synonym: SeSA_A3952
Alternate gene names: 194735749
Gene position: 3822043-3824124 (Clockwise)
Preceding gene: 194735347
Following gene: 194734456
Centisome position: 81.16
GC content: 58.74
Gene sequence:
>2082_bases ATGTCAGGCCGCTTGTTAGACGCTGTTCCGCTCAATTCCCTGACAGGCGTCGGCGCAGCGCAAAGCAGTAAACTGGCGAA AATTGGCCTGCACACCGTGCAGGACCTCCTGCTCCACCTCCCTCTGCGTTACGAAGACCGCACCCATCTCTACCCCATTG GCGAACTGCTGCCTGGCATCTACGCCACCGTTGAAGGTGAAGTGCTGAACTGCAATATCACTTTCGGCGGTCGTCGGATG ATGACCTGCCAGATTAGCGACGGTTCCGGCATTCTTACCATGCGCTTTTTCAATTTTAACGCGGCGATGAAAAACAGCCT GGCGACGGGACGGCGTGTGCTGGCCTACGGGGAAGCGAAGCGCGGCAAGTATGGCGCAGAGATGATCCATCCGGAATATC GCCTGCAGGGCGATCTCAGCACGCCGGAACTTCAGGAAACGCTCACCCCCGTCTATCCGACCACCGAGGGCGTGAAGCAA GCGACACTGCGCAAGCTTACCGATCAGGCGCTGGAGCTGCTCGACACCTGCGCCATTGCCGAACTACTGCCGCCGGAACT GGCGCAGGGTATGATGAGCCTGCCGGAGGCGCTACGTACCTTGCATCGCCCGCCGCCGACACTCCAGCTCGCCGATTTAG AAACCGGTAAACACCCGGCGCAGCGGCGGCTTATTCTTGAAGAGCTACTGGCGCATAACCTCAGTATGCTGGCACTTCGC GCAGGCGCGCAGCGCTACCACGCTCAGCCGCTAAGTACCAACAACATATTGAAAGACAATCTGCTGGCGTCGTTGCCGTT TAAACCCACCAGCGCGCAGGCGCGGGTGGTAGCAGAGATCGAACGTGATATGGCTCTGGATGTGCCGATGATGCGTCTGG TTCAGGGCGACGTCGGCTCAGGGAAAACGCTGGTTGCGGCGCTTGCCGCCTTGCGCGCTATTGCCCACGGTAAGCAGGTG GCGCTGATGGCGCCGACCGAATTGCTGGCTGAACAGCACGCAAATAATTTCCGCAACTGGTTCGAACCGTTGGGCGTTGA AGTGGGTTGGCTGGCAGGTAAGCAAAAAGGTAAAGCGCGTCAGGCGCAGCAAGAGGCTATTGCCAGCGGTCAGGTGCAGA TGATTGTCGGCACCCACGCTATCTTTCAGGAACAGGTGCAGTTTAACGGGCTGGCGCTGGTGATCATCGACGAACAGCAC CGCTTTGGCGTCCACCAGCGTCTGGCGCTGTGGGAAAAAGGCCAGCAGCAGGGCTTTCACCCACATCAGTTGATTATGAC CGCAACGCCCATTCCGCGCACCCTGGCGATGACTGCCTACGCCGATCTCGATACCTCGGTGATTGACGAGCTACCGCCGG GCCGTACCCCTGTCACTACCGTTGCGATTCCGGATACCCGTCGCCATGAAATCATTGATCGTGTGCGCAACGCCTGCACA ACCGAAGGCCGTCAGGCCTACTGGGTCTGTACGCTGATTGAAGAGTCCGACCTGCTGGAAGCGCAGGCGGCGGAAGCCAC CTGGGAGGAGCTCAAGCTGGCGCTGCCGGAGTTGAATATTGGCCTGGTACACGGCCGCATGAAGCCCGCCGAAAAACAGG CGGTGATGCAGGCCTTTAAGCAGGGTGAACTGCATCTGCTGGTCGCCACTACGGTGATTGAGGTGGGGGTCGATGTTCCT AACGCCAGCCTGATGATTATTGAAAACCCGGAGCGGCTGGGCCTGGCGCAGTTACACCAGCTCAGAGGGCGCGTTGGCCG TGGCGCGGTCGCATCGCACTGCGTGCTGCTCTATAAATCGCCGCTGTCGAAAACGGCGCAGAAGCGTTTACAGGTATTGC GCGACAGCAACGACGGCTTTGTGATTGCACAAAAAGATTTAGAGATTCGCGGCCCGGGGGAATTACTGGGCACGCGCCAG ACGGGTAACGCCGAATTTAAAGTAGCTGATTTGCTGCGCGATCAAGCCATGATCCCCGAAGTTCAGCGTATTGCCCGTCA TATTCACGAACGTTATCCGCAGCAGGCACAAGCGCTGATTGAGCGCTGGATGCCGGAAACCGAACGTTATTCCAACGCCT AA
Upstream 100 bases:
>100_bases CTAAACGTAAAGGTCTGCCTTATCCTCGCGTCAATCAGCAGGGCGAAATCGACGCCGATGCTGACTGGTGGGCGACGATG CAGGCGGCAGGGTAATCACC
Downstream 100 bases:
>100_bases TGAGCACGGCGGCTTTAATGCCGCCGTACAAACTATTATTGCGCGAAAATCGGTAACAGCAGGTACAGCTTGATTACCAA CGCATTAACGATATCGATAA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 693; Mature: 692
Protein sequence:
>693_residues MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGIYATVEGEVLNCNITFGGRRM MTCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQ ATLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALR AGAQRYHAQPLSTNNILKDNLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQV ALMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKARQAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQH RFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRHEIIDRVRNACT TEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGELHLLVATTVIEVGVDVP NASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQ TGNAEFKVADLLRDQAMIPEVQRIARHIHERYPQQAQALIERWMPETERYSNA
Sequences:
>Translated_693_residues MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGIYATVEGEVLNCNITFGGRRM MTCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQ ATLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALR AGAQRYHAQPLSTNNILKDNLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQV ALMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKARQAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQH RFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRHEIIDRVRNACT TEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGELHLLVATTVIEVGVDVP NASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQ TGNAEFKVADLLRDQAMIPEVQRIARHIHERYPQQAQALIERWMPETERYSNA >Mature_692_residues SGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGIYATVEGEVLNCNITFGGRRMM TCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQA TLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALRA GAQRYHAQPLSTNNILKDNLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVA LMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKARQAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHR FGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRHEIIDRVRNACTT EGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGELHLLVATTVIEVGVDVPN ASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQT GNAEFKVADLLRDQAMIPEVQRIARHIHERYPQQAQALIERWMPETERYSNA
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=693, Percent_Identity=94.2279942279942, Blast_Score=1322, Evalue=0.0, Organism=Escherichia coli, GI1787357, Length=390, Percent_Identity=39.2307692307692, Blast_Score=244, Evalue=1e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 76583; Mature: 76451
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGI CCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCC YATVEGEVLNCNITFGGRRMMTCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAK EEEECCEEEEEEEEECCCEEEEEEECCCCCEEEEEEEECCHHHHHHHHCCCEEEEECCCC RGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALELLDTCAIA CCCCCHHHCCCCCEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALR HHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHH AGAQRYHAQPLSTNNILKDNLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGS HHHHHHCCCCCCCCCCHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCC GKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKAR CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHH QAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFH HHHHHHHHCCCEEEEECHHHHHHHHHHHCCEEEEEECCCHHCCHHHHHHHHHHHHHCCCC PHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRHEIIDRVRNACT CCEEEEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC TEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFK CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH QGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKS CCCEEEEEEHHHHHHCCCCCCCEEEEEECCHHCCHHHHHHHHHCCCCCHHHHHHHHEECC PLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPE HHHHHHHHHHHHHHCCCCCEEEEECCCEECCCHHHCCCCCCCCCCCHHHHHHHHHHCCHH VQRIARHIHERYPQQAQALIERWMPETERYSNA HHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCCC >Mature Secondary Structure SGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGI CCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCC YATVEGEVLNCNITFGGRRMMTCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAK EEEECCEEEEEEEEECCCEEEEEEECCCCCEEEEEEEECCHHHHHHHHCCCEEEEECCCC RGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALELLDTCAIA CCCCCHHHCCCCCEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALR HHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHH AGAQRYHAQPLSTNNILKDNLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGS HHHHHHCCCCCCCCCCHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCC GKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKAR CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHH QAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFH HHHHHHHHCCCEEEEECHHHHHHHHHHHCCEEEEEECCCHHCCHHHHHHHHHHHHHCCCC PHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRHEIIDRVRNACT CCEEEEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC TEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFK CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH QGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKS CCCEEEEEEHHHHHHCCCCCCCEEEEEECCHHCCHHHHHHHHHCCCCCHHHHHHHHEECC PLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPE HHHHHHHHHHHHHHCCCCCEEEEECCCEECCCHHHCCCCCCCCCCCHHHHHHHHHHCCHH VQRIARHIHERYPQQAQALIERWMPETERYSNA HHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]