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The map label for this gene is trpH [H]

Identifier: 194735330

GI number: 194735330

Start: 1794787

End: 1795635

Strand: Reverse

Name: trpH [H]

Synonym: SeSA_A1853

Alternate gene names: 194735330

Gene position: 1795635-1794787 (Counterclockwise)

Preceding gene: 194735496

Following gene: 194734510

Centisome position: 38.13

GC content: 56.3

Gene sequence:

>849_bases
GTGATTTACGATCTGCACAGTCATACCACGGCGTCCGATGGACTGTTGACGCCAGAAACATTAGTACACCGTGCGGTAGA
GATGCGAGTCGGCACGCTGGCGATTACCGATCATGACACCACAGCCGCGATTCCTGCGGCAAGAGAAGAAATTTCACGTT
CCGGGCTGGCCCTGAATCTTATTCCCGGCGTGGAGATTTCAACGGTCTGGGAGAATCATGAGATTCACATTGTGGGTCTG
AATATTGATATTGCGCACCCGGCAATGCGCGATTTTCTGGCGCAGCAGACACAGCGGCGTCAGGCGCGTGGTCGGCTCAT
TGCGGAGCGTCTGGAAAAAGCCCATATTCCCGGCGCGTGGGAAGGGGCACTGAGACTGGCCAATGGCGGCGCGGTGACGC
GCGGCCACTTCGCCCGCTTTCTGGTGGAGTGCGGCAAAGCCGCGACCATGGCGGATGTTTTTAAAAAATATCTCGCGCGT
GGGAAAACCGGTTACGTTCCGCCGCAGTGGTGTACAATAGAACAAGCTATTGATGTCATTCATCATTCTGGCGGTAAGGC
GGTGTTGGCCCATCCGGGACGCTACGACCTTAGCGCTAAGTGGCTGAAAAGATTAGTGGCGCATTTTGCCGACCATCACG
GCGACGCGATGGAAGTGGCGCAGTGCCAACAATCGCCCAATGAACGCACCCAACTGGCGACGCTTGCGCGTCAGCATCAT
TTATGGGCATCGCTTGGATCTGATTTCCATCAGCCCTGCCCGTGGATTGAGTTGGGGCGTAAACTCTGGCTGCCCGCTGG
CGTTGAAGGCGTATGGCAGACATGGGAACAGCCGCAAATATCACAGTGA

Upstream 100 bases:

>100_bases
AATGTCAACACCTATTTCAGTATATTTGCCGGAACCGTTATGATGTACATGACATACCTTTATCTCTATGGGAGCCGCCT
TGAGCGACACGAATTACGCA

Downstream 100 bases:

>100_bases
GGGAAGTATGAGCCAGTTTTTTTATATCCATCCGGATAACCCACAGCAACGGCTGATTAATCAGGCCGTCGACATTGTGC
GTAAAGGCGGTGTTATTGTT

Product: putative phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAAREEISRSGLALNLIPGVEISTVWENHEIHIVGL
NIDIAHPAMRDFLAQQTQRRQARGRLIAERLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKAATMADVFKKYLAR
GKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNERTQLATLARQHH
LWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQTWEQPQISQ

Sequences:

>Translated_282_residues
MIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAAREEISRSGLALNLIPGVEISTVWENHEIHIVGL
NIDIAHPAMRDFLAQQTQRRQARGRLIAERLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKAATMADVFKKYLAR
GKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNERTQLATLARQHH
LWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQTWEQPQISQ
>Mature_282_residues
MIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAAREEISRSGLALNLIPGVEISTVWENHEIHIVGL
NIDIAHPAMRDFLAQQTQRRQARGRLIAERLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKAATMADVFKKYLAR
GKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNERTQLATLARQHH
LWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQTWEQPQISQ

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=279, Percent_Identity=91.0394265232975, Blast_Score=525, Evalue=1e-150,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31332; Mature: 31332

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAAREEISRSGLALNL
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCHHCHHHHHHHHHCCCEEEE
IPGVEISTVWENHEIHIVGLNIDIAHPAMRDFLAQQTQRRQARGRLIAERLEKAHIPGAW
ECCCEEEEEECCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EGALRLANGGAVTRGHFARFLVECGKAATMADVFKKYLARGKTGYVPPQWCTIEQAIDVI
HHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
HHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNERTQLATLARQHH
HCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
LWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQTWEQPQISQ
HHHHHCCHHCCCCCHHHHCHHHCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAAREEISRSGLALNL
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCHHCHHHHHHHHHCCCEEEE
IPGVEISTVWENHEIHIVGLNIDIAHPAMRDFLAQQTQRRQARGRLIAERLEKAHIPGAW
ECCCEEEEEECCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EGALRLANGGAVTRGHFARFLVECGKAATMADVFKKYLARGKTGYVPPQWCTIEQAIDVI
HHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
HHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNERTQLATLARQHH
HCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
LWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQTWEQPQISQ
HHHHHCCHHCCCCCHHHHCHHHCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]