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The map label for this gene is ompW [H]

Identifier: 194735496

GI number: 194735496

Start: 1805272

End: 1805910

Strand: Reverse

Name: ompW [H]

Synonym: SeSA_A1864

Alternate gene names: 194735496

Gene position: 1805910-1805272 (Counterclockwise)

Preceding gene: 194734543

Following gene: 194735330

Centisome position: 38.35

GC content: 53.21

Gene sequence:

>639_bases
ATGAAAAAATTTACAGTGGCGGCACTGGCGTTAACAACTCTTCTCTCAGGCAGCGCGTTCGCGCACGAAGCCGGAGAATT
CTTTATGCGTGCAGGTCCGGCAACCGTCAGACCTACAGAAGGGGCGGGTGGTACGCTGGGGCATTTAAACGGGTTTGATG
TGAGTAATAACACGCAACTCGGCCTGACATTCACTTACATGGCGACGGACAATATCGGGGTTGAATTGCTGGCGGCCACG
CCGTTCCGCCATAAGGTGGGTACAGGCGCGACGGGCGATATCGCCACGGTCCACCTGTTACCGCCAACGTTAATGGCGCA
GTGGTACTTCGGCGATTCCAGCAGCAAAGTGCGTCCTTATGTCGGCGTAGGGGTGAACTACACCACCTTCTTCGATAACG
GCTTTAACGATAATGGTAAAAATGCCGGGCTGTCCGATCTGAGCTTTAAGGATTCCTGGGGCGCGGCAGGGCAAGTTGGG
GTAGATTACCTGATTAACCGCGACTGGTTAATTGGCGCCTCTGTCTGGTACATGGATATTGATACTACCGCCAATTATAA
AATGGGCGGCGTTCAGCATCATGACAGCGTGCGTCTGGACCCATGGGTATTTATGTTCTCGGCAGGCTATCGTTTCTAA

Upstream 100 bases:

>100_bases
ATGTTAAATTATAAGAACAAATGTGATCTGTGTTAGATCACTTATTACTTCATTGTGGGTATATTCATCACGCTTTTATA
ACCATAACGATGGAGCGGGT

Downstream 100 bases:

>100_bases
TCGCGTGATGTTGTGACGAAAAAAGACCCCGCCAGGCGGGGTCAAAAAAGGACATGACACACGGATTTTACTTGTCGGAA
CTCACTTGTCTTCTTTCGGT

Product: outer membrane protein W

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQLGLTFTYMATDNIGVELLAAT
PFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPYVGVGVNYTTFFDNGFNDNGKNAGLSDLSFKDSWGAAGQVG
VDYLINRDWLIGASVWYMDIDTTANYKMGGVQHHDSVRLDPWVFMFSAGYRF

Sequences:

>Translated_212_residues
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQLGLTFTYMATDNIGVELLAAT
PFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPYVGVGVNYTTFFDNGFNDNGKNAGLSDLSFKDSWGAAGQVG
VDYLINRDWLIGASVWYMDIDTTANYKMGGVQHHDSVRLDPWVFMFSAGYRF
>Mature_212_residues
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQLGLTFTYMATDNIGVELLAAT
PFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPYVGVGVNYTTFFDNGFNDNGKNAGLSDLSFKDSWGAAGQVG
VDYLINRDWLIGASVWYMDIDTTANYKMGGVQHHDSVRLDPWVFMFSAGYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=212, Percent_Identity=89.1509433962264, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 22900; Mature: 22900

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQL
CCCCHHHHHHHHHHHCCCCHHHHHHHHEEECCCCEECCCCCCCCCCCCCCCCCCCCCCEE
GLTFTYMATDNIGVELLAATPFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPY
EEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECHHHEEEEEECCCCCCCCEE
VGVGVNYTTFFDNGFNDNGKNAGLSDLSFKDSWGAAGQVGVDYLINRDWLIGASVWYMDI
EECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEE
DTTANYKMGGVQHHDSVRLDPWVFMFSAGYRF
CCCCCEEECCCCCCCCEEECCEEEEEECCCCC
>Mature Secondary Structure
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQL
CCCCHHHHHHHHHHHCCCCHHHHHHHHEEECCCCEECCCCCCCCCCCCCCCCCCCCCCEE
GLTFTYMATDNIGVELLAATPFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPY
EEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECHHHEEEEEECCCCCCCCEE
VGVGVNYTTFFDNGFNDNGKNAGLSDLSFKDSWGAAGQVGVDYLINRDWLIGASVWYMDI
EECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEE
DTTANYKMGGVQHHDSVRLDPWVFMFSAGYRF
CCCCCEEECCCCCCCCEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]