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The map label for this gene is ydiU [H]

Identifier: 194734876

GI number: 194734876

Start: 1387541

End: 1388983

Strand: Direct

Name: ydiU [H]

Synonym: SeSA_A1440

Alternate gene names: 194734876

Gene position: 1387541-1388983 (Clockwise)

Preceding gene: 194737746

Following gene: 194734976

Centisome position: 29.47

GC content: 54.26

Gene sequence:

>1443_bases
ATGACCCTGTCTTTTACTGCCCGTTGGCGCGATGAACTGCCAGCAACGTATACCGCGCTTTTACCCACACCGTTAAAAAA
TGCGCGACTGATTTGGTATAACGACGAACTGGCGCAGCAGTTAGCCATTCCCGCGTCGTTATTTGACGTTACCAATGGCG
CTGGCGTTTGGGGCGGCGAAACCTTATTACCCGGTATGTCGCCTGTCGCGCAGGTATATAGCGGGCATCAGTTCGGCGTC
TGGGCGGGACAACTCGGCGACGGACGCGGTATTTTGCTGGGCGAACAGCTCCTGGCGGATGGCTCGACCCTCGACTGGCA
TCTGAAAGGCGCCGGATTAACACCCTATTCGCGAATGGGGGATGGACGCGCCGTCCTGCGTTCAACCATACGAGAAAGTC
TTGCCAGCGAAGCCATGCATTATCTGGGTATTCCCACTACGCGCGCGTTATCTATCGTAGCCAGCGATACGCCGGTTCAG
CGAGAGACGCAGGAAACGGGCGCCATGTTAATGCGTCTGGCACAAAGTCATATGCGTTTTGGTCATTTCGAACATTTCTA
TTACCGCCGTGAGCCGGAAAAAGTTCAGCAACTGGCTGATTTCGCTATTCGTCATTACTGGCCGCAATGGCAGGATGTCC
CGGAAAAATATGCTTTGTGGTTTGAAGAGGTGGCGGCGCGTACCGGAAGACTTATCGCCGAGTGGCAAACCGTCGGTTTT
TCGCACGGCGTTATGAATACGGATAACATGTCGATTCTGGGGCTGACCATCGACTATGGCCCCTTTGGTTTTCTCGATGA
CTACGATCCCGGCTTCATTGGTAACCATTCCGATCATCAGGGACGTTACCGCTTCGATAATCAACCGTCGGTGGCGCTGT
GGAATTTACAACGTCTGGCGCAGACGCTAACCCCTTTTATTGAGATCGACGCGTTAAACAGAGCGCTGGATCGTTACCAG
GACGCGTTGTTAACGCACTATGGGCAGCGAATGCGCCAGAAGCTGGGCTTCTTTACCGAGCAAAAAGACGATAACGCTTT
ACTGAATGAATTGTTTAGTCTGATGGCGCGCGAAGGGAGTGATTATACCCGTACATTTCGGATGTTAAGCCATACGGAGC
AACAGAGCGCTTCCTCGCCGTTGCGGGATACGTTTATCGATCGCACGGCGTTCGATGCCTGGTTCGAACGCTACCGGGCG
CGATTGCGCACAGAGGCGGTGGATGACGCGCTGCGCCAGCAGCAGATGCAACGCGTGAATCCTGCGGTTGTGTTGCGCAA
CTGGCTGGCGCAACGCGCGATAGATGCGGCTGAACAAGGAGACATGGCGGAACTGCATCGGTTGCATGAAGTTTTACGTC
AACCTTTTACCGATCGAGATGATGACTATGCCAGCCGACCACCGGAGTGGGGAAAGCGGCTGGAGGTCAGTTGTTCAAGT
TAG

Upstream 100 bases:

>100_bases
GTGCCGGTAAACCAGCTCATTAAACTCGTTCAGAGATAACCTTTCTGTTTGCCGGTGTTTAACCGGTGATTAACCGTCTA
CACTGAAGACAGGAGGCCCT

Downstream 100 bases:

>100_bases
CCTGATGCCAGCAGCATCGTCTGCTGGCGGGAGCGCTATTTGGTTAACAGTAGTTTACCGGCCTGAGTTTTGCGCAACAG
ATACTCCTGACCGTTGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MTLSFTARWRDELPATYTALLPTPLKNARLIWYNDELAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVYSGHQFGV
WAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVASDTPVQ
RETQETGAMLMRLAQSHMRFGHFEHFYYRREPEKVQQLADFAIRHYWPQWQDVPEKYALWFEEVAARTGRLIAEWQTVGF
SHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSDHQGRYRFDNQPSVALWNLQRLAQTLTPFIEIDALNRALDRYQ
DALLTHYGQRMRQKLGFFTEQKDDNALLNELFSLMAREGSDYTRTFRMLSHTEQQSASSPLRDTFIDRTAFDAWFERYRA
RLRTEAVDDALRQQQMQRVNPAVVLRNWLAQRAIDAAEQGDMAELHRLHEVLRQPFTDRDDDYASRPPEWGKRLEVSCSS

Sequences:

>Translated_480_residues
MTLSFTARWRDELPATYTALLPTPLKNARLIWYNDELAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVYSGHQFGV
WAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVASDTPVQ
RETQETGAMLMRLAQSHMRFGHFEHFYYRREPEKVQQLADFAIRHYWPQWQDVPEKYALWFEEVAARTGRLIAEWQTVGF
SHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSDHQGRYRFDNQPSVALWNLQRLAQTLTPFIEIDALNRALDRYQ
DALLTHYGQRMRQKLGFFTEQKDDNALLNELFSLMAREGSDYTRTFRMLSHTEQQSASSPLRDTFIDRTAFDAWFERYRA
RLRTEAVDDALRQQQMQRVNPAVVLRNWLAQRAIDAAEQGDMAELHRLHEVLRQPFTDRDDDYASRPPEWGKRLEVSCSS
>Mature_479_residues
TLSFTARWRDELPATYTALLPTPLKNARLIWYNDELAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVYSGHQFGVW
AGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVASDTPVQR
ETQETGAMLMRLAQSHMRFGHFEHFYYRREPEKVQQLADFAIRHYWPQWQDVPEKYALWFEEVAARTGRLIAEWQTVGFS
HGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSDHQGRYRFDNQPSVALWNLQRLAQTLTPFIEIDALNRALDRYQD
ALLTHYGQRMRQKLGFFTEQKDDNALLNELFSLMAREGSDYTRTFRMLSHTEQQSASSPLRDTFIDRTAFDAWFERYRAR
LRTEAVDDALRQQQMQRVNPAVVLRNWLAQRAIDAAEQGDMAELHRLHEVLRQPFTDRDDDYASRPPEWGKRLEVSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=383, Percent_Identity=44.1253263707572, Blast_Score=300, Evalue=3e-81,
Organism=Escherichia coli, GI1787999, Length=480, Percent_Identity=81.875, Blast_Score=822, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325034, Length=362, Percent_Identity=35.3591160220994, Blast_Score=216, Evalue=5e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 54888; Mature: 54757

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSFTARWRDELPATYTALLPTPLKNARLIWYNDELAQQLAIPASLFDVTNGAGVWGGE
CCEEECCHHHHCCCCCEEHHCCCCCCCCEEEEECHHHHHHHHCCHHHHHCCCCCCCCCCC
TLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMG
CCCCCCHHHHHHHCCCCCCEEECCCCCCCEEEEHHHHHCCCCCEEEEEECCCCCCHHHCC
DGRAVLRSTIRESLASEAMHYLGIPTTRALSIVASDTPVQRETQETGAMLMRLAQSHMRF
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
GHFEHFYYRREPEKVQQLADFAIRHYWPQWQDVPEKYALWFEEVAARTGRLIAEWQTVGF
CCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCHHHHHHHHHCC
SHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSDHQGRYRFDNQPSVALWNLQRLA
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
QTLTPFIEIDALNRALDRYQDALLTHYGQRMRQKLGFFTEQKDDNALLNELFSLMAREGS
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
DYTRTFRMLSHTEQQSASSPLRDTFIDRTAFDAWFERYRARLRTEAVDDALRQQQMQRVN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAVVLRNWLAQRAIDAAEQGDMAELHRLHEVLRQPFTDRDDDYASRPPEWGKRLEVSCSS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
TLSFTARWRDELPATYTALLPTPLKNARLIWYNDELAQQLAIPASLFDVTNGAGVWGGE
CEEECCHHHHCCCCCEEHHCCCCCCCCEEEEECHHHHHHHHCCHHHHHCCCCCCCCCCC
TLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMG
CCCCCCHHHHHHHCCCCCCEEECCCCCCCEEEEHHHHHCCCCCEEEEEECCCCCCHHHCC
DGRAVLRSTIRESLASEAMHYLGIPTTRALSIVASDTPVQRETQETGAMLMRLAQSHMRF
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
GHFEHFYYRREPEKVQQLADFAIRHYWPQWQDVPEKYALWFEEVAARTGRLIAEWQTVGF
CCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCHHHHHHHHHCC
SHGVMNTDNMSILGLTIDYGPFGFLDDYDPGFIGNHSDHQGRYRFDNQPSVALWNLQRLA
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
QTLTPFIEIDALNRALDRYQDALLTHYGQRMRQKLGFFTEQKDDNALLNELFSLMAREGS
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
DYTRTFRMLSHTEQQSASSPLRDTFIDRTAFDAWFERYRARLRTEAVDDALRQQQMQRVN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAVVLRNWLAQRAIDAAEQGDMAELHRLHEVLRQPFTDRDDDYASRPPEWGKRLEVSCSS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA