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The map label for this gene is cdgR [H]

Identifier: 194737746

GI number: 194737746

Start: 1386766

End: 1387479

Strand: Direct

Name: cdgR [H]

Synonym: SeSA_A1439

Alternate gene names: 194737746

Gene position: 1386766-1387479 (Clockwise)

Preceding gene: 194735392

Following gene: 194734876

Centisome position: 29.45

GC content: 45.8

Gene sequence:

>714_bases
ATGATTGCTTCACTTGATGAGCTTTACCATTCCGAACTCTTTTTCCTTCCCGTCATGGATGAAAACGCTCGGCTTGTTGG
TTTAGAGATTATTGCAACGTTTGCCGCTGAAGACGGCGCCGTGCGGATGCCGACTGAGTTGGTAGCGCCTCGCCTTTCGG
TGGAGGAACAATACTGTCTGTTTGTTGAAAAACTGGCGTTGTTAGAAACCTGTCAGCACTTTTTTATTCAGCATAAACTT
ATTGCATGGCTTAATTTACCGCCTGCAATTAGTGACTTATTATTATTAGATAGCGAACTTTTTTCCCGGGCAGCACGCTT
TCCGTTTCTTGAATTAGCTATAAATGAGAATTATCCTGGGTTAAACCAAGGCAAAAACAATGAAACGTTAGCTAATCTGG
CAATGCATTTCCCATTAATGCTGGCAAATTTTGGGGCAGGCGAGGCGTCGACTAAAGCTATTTTCGATGGACTTTTCAAA
CGAGTCATGTTGGATAAAAACTTTATTCAGCAGCGTGCTGAAATGATCTCATTCGAACCATTCATGCACGCCATCGTTGC
CCAGATCTCCTCCAGCTGCGAGTCGCTGATGATTGCCGGTATTGATACTGAGGCGATGTTTGCGCGCGCAGCGCCATTGG
GGTTTAGCGCATTCCAGGGCGGACTATGGCCTCCGGTGCCGGTAAACCAGCTCATTAAACTCGTTCAGAGATAA

Upstream 100 bases:

>100_bases
CAAGAAAAATGATGACGCTTCAATTAGTATCTGAAGTTACGTCTGTTTCCGTCCGTAGTGACTGGATGGCGAATAGCGCC
CTAACCATGGGACTGGCGTA

Downstream 100 bases:

>100_bases
CCTTTCTGTTTGCCGGTGTTTAACCGGTGATTAACCGTCTACACTGAAGACAGGAGGCCCTATGACCCTGTCTTTTACTG
CCCGTTGGCGCGATGAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: c-diGMP regulator [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MIASLDELYHSELFFLPVMDENARLVGLEIIATFAAEDGAVRMPTELVAPRLSVEEQYCLFVEKLALLETCQHFFIQHKL
IAWLNLPPAISDLLLLDSELFSRAARFPFLELAINENYPGLNQGKNNETLANLAMHFPLMLANFGAGEASTKAIFDGLFK
RVMLDKNFIQQRAEMISFEPFMHAIVAQISSSCESLMIAGIDTEAMFARAAPLGFSAFQGGLWPPVPVNQLIKLVQR

Sequences:

>Translated_237_residues
MIASLDELYHSELFFLPVMDENARLVGLEIIATFAAEDGAVRMPTELVAPRLSVEEQYCLFVEKLALLETCQHFFIQHKL
IAWLNLPPAISDLLLLDSELFSRAARFPFLELAINENYPGLNQGKNNETLANLAMHFPLMLANFGAGEASTKAIFDGLFK
RVMLDKNFIQQRAEMISFEPFMHAIVAQISSSCESLMIAGIDTEAMFARAAPLGFSAFQGGLWPPVPVNQLIKLVQR
>Mature_237_residues
MIASLDELYHSELFFLPVMDENARLVGLEIIATFAAEDGAVRMPTELVAPRLSVEEQYCLFVEKLALLETCQHFFIQHKL
IAWLNLPPAISDLLLLDSELFSRAARFPFLELAINENYPGLNQGKNNETLANLAMHFPLMLANFGAGEASTKAIFDGLFK
RVMLDKNFIQQRAEMISFEPFMHAIVAQISSSCESLMIAGIDTEAMFARAAPLGFSAFQGGLWPPVPVNQLIKLVQR

Specific function: Required for resistance to host phagocyte oxidase [H]

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1788000, Length=233, Percent_Identity=53.2188841201717, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 26451; Mature: 26451

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASLDELYHSELFFLPVMDENARLVGLEIIATFAAEDGAVRMPTELVAPRLSVEEQYCL
CCCCHHHHHHCCEEEEEEECCCCEEEHHHHHHHHHCCCCCEECCHHHHCCCCCCHHHHHH
FVEKLALLETCQHFFIQHKLIAWLNLPPAISDLLLLDSELFSRAARFPFLELAINENYPG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
LNQGKNNETLANLAMHFPLMLANFGAGEASTKAIFDGLFKRVMLDKNFIQQRAEMISFEP
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMHAIVAQISSSCESLMIAGIDTEAMFARAAPLGFSAFQGGLWPPVPVNQLIKLVQR
HHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MIASLDELYHSELFFLPVMDENARLVGLEIIATFAAEDGAVRMPTELVAPRLSVEEQYCL
CCCCHHHHHHCCEEEEEEECCCCEEEHHHHHHHHHCCCCCEECCHHHHCCCCCCHHHHHH
FVEKLALLETCQHFFIQHKLIAWLNLPPAISDLLLLDSELFSRAARFPFLELAINENYPG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
LNQGKNNETLANLAMHFPLMLANFGAGEASTKAIFDGLFKRVMLDKNFIQQRAEMISFEP
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMHAIVAQISSSCESLMIAGIDTEAMFARAAPLGFSAFQGGLWPPVPVNQLIKLVQR
HHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA