Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194334618
Identifier: 194334618
GI number: 194334618
Start: 1985434
End: 1985955
Strand: Reverse
Name: 194334618
Synonym: Paes_1819
Alternate gene names: NA
Gene position: 1985955-1985434 (Counterclockwise)
Preceding gene: 194334619
Following gene: 194334616
Centisome position: 79.03
GC content: 53.45
Gene sequence:
>522_bases GTGATCCTTTTTCTCAATGCACCTGCAACGAAGCCCAACCGGAACCGCAAACTCTGGGCCGGCTCAACGGCGTTCATCAT CCTGCTGCTGTCGGTCTGGTTTGTGCTCAACCCCTCACCCTCAGCGTCTCCTCCCGGTCAGATCGCACGCGAAACAAGCT GGTCAAGAGCGGCAATGATGGCCGAACTCATGATTTCGGCTATAGAAGTCGTTCCTGCGGTCCCGGCAAAAGATCGTCCG TTTACCGTCAACGTGTTTATTCAGAACATCGGCATCATCCCCTCAGGAAGCTATACCCTTCACCTTGTCATTAAGGGTCC TGATGGTCGGGAAGTTTTCCGTACCCTTTCAGAGCACAACACTGCACTCGAGCCGGGCCAGATCGGTGCAGGACTCTCTG CAGCGGTTGACCCTGTAGCCTATTCAGGAACCTATAGCGTCACAGTCGATCTTCAGCCAGAAGACTTTGAGGACGACAAT CTCTCCAACAACCGCTCAACGCGATCGTTTCAGATAGAATAA
Upstream 100 bases:
>100_bases CTGGGTGACCCGGGGGCGCAGCACTGGCTGAAAGAACACAATGTCTCCTGGGAGTGATGGTTCATGGGTTCTCTGACGAT ACATTCTGATTGATTGAGGC
Downstream 100 bases:
>100_bases AAGGTACCCCGCAAGAAGGCCGACCGGCAACAGCAGAATGTGCGGCCCCCAAAGAGCAGCCCCTCCGAAAAGAACCATCA GTTGAACGACCATCAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MILFLNAPATKPNRNRKLWAGSTAFIILLLSVWFVLNPSPSASPPGQIARETSWSRAAMMAELMISAIEVVPAVPAKDRP FTVNVFIQNIGIIPSGSYTLHLVIKGPDGREVFRTLSEHNTALEPGQIGAGLSAAVDPVAYSGTYSVTVDLQPEDFEDDN LSNNRSTRSFQIE
Sequences:
>Translated_173_residues MILFLNAPATKPNRNRKLWAGSTAFIILLLSVWFVLNPSPSASPPGQIARETSWSRAAMMAELMISAIEVVPAVPAKDRP FTVNVFIQNIGIIPSGSYTLHLVIKGPDGREVFRTLSEHNTALEPGQIGAGLSAAVDPVAYSGTYSVTVDLQPEDFEDDN LSNNRSTRSFQIE >Mature_173_residues MILFLNAPATKPNRNRKLWAGSTAFIILLLSVWFVLNPSPSASPPGQIARETSWSRAAMMAELMISAIEVVPAVPAKDRP FTVNVFIQNIGIIPSGSYTLHLVIKGPDGREVFRTLSEHNTALEPGQIGAGLSAAVDPVAYSGTYSVTVDLQPEDFEDDN LSNNRSTRSFQIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18798; Mature: 18798
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILFLNAPATKPNRNRKLWAGSTAFIILLLSVWFVLNPSPSASPPGQIARETSWSRAAMM CEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHEECCCCCCCCCCCHHHHCCHHHHHHH AELMISAIEVVPAVPAKDRPFTVNVFIQNIGIIPSGSYTLHLVIKGPDGREVFRTLSEHN HHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHCC TALEPGQIGAGLSAAVDPVAYSGTYSVTVDLQPEDFEDDNLSNNRSTRSFQIE CCCCCCCCCCCCHHHCCCEEECCEEEEEEEECCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MILFLNAPATKPNRNRKLWAGSTAFIILLLSVWFVLNPSPSASPPGQIARETSWSRAAMM CEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHEECCCCCCCCCCCHHHHCCHHHHHHH AELMISAIEVVPAVPAKDRPFTVNVFIQNIGIIPSGSYTLHLVIKGPDGREVFRTLSEHN HHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHCC TALEPGQIGAGLSAAVDPVAYSGTYSVTVDLQPEDFEDDNLSNNRSTRSFQIE CCCCCCCCCCCCHHHCCCEEECCEEEEEEEECCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA