Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194333623
Identifier: 194333623
GI number: 194333623
Start: 865525
End: 865968
Strand: Reverse
Name: 194333623
Synonym: Paes_0790
Alternate gene names: NA
Gene position: 865968-865525 (Counterclockwise)
Preceding gene: 194333624
Following gene: 194333622
Centisome position: 34.46
GC content: 50.68
Gene sequence:
>444_bases ATGCTCTATTCTGAAGCAAAACAAGGCAGAACATTCATCATCCGTCTTGAAGACGGAGAGATCGTTCATACAGCCCTCGA AACATTCGCGACCGAAAAAGGCATCAACGCCGCATCGCTCATCATACTTGGCGGCGCCGACAGGCACAGCAAACTTGTTG TCGGCCCGATGGAAAGCCGTTCGCAACCTGTCATAGCAATGGAACACGAACTCTATGACGCCCATGAGGTAACCGGAACA GGAACCATTTTTCCTGACGATACCGGAACACCGGTGCTGCACATGCATATGGCCTGCGGACGTGAAGAGAATACCGTAAC AGGATGTATCCGTCAAGGCGTCAAAGTATGGCAGGTCATGGAAGTCATTCTCTTTGAACTCACCGATACCACAGCATCAA GACAACCAGACCGCAACACCGGCTTTAAACTCCTGCAACCATAG
Upstream 100 bases:
>100_bases CATGAGCGACCCCTGGAGAGGAGAATCGGAACGATGAGAGAGAAAAGCACTTTCAAATGTGTATCTTGCAATAAAGCAAG CGATTCAAACTCTACCATGT
Downstream 100 bases:
>100_bases GAAGAAATCGTGAACCGTTATTCGTTATTCGTTATCCGTAACTAATCACTATTCACCGGTCACTGGTCACTGGTCACTGG TCACTATTCACCAATCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MLYSEAKQGRTFIIRLEDGEIVHTALETFATEKGINAASLIILGGADRHSKLVVGPMESRSQPVIAMEHELYDAHEVTGT GTIFPDDTGTPVLHMHMACGREENTVTGCIRQGVKVWQVMEVILFELTDTTASRQPDRNTGFKLLQP
Sequences:
>Translated_147_residues MLYSEAKQGRTFIIRLEDGEIVHTALETFATEKGINAASLIILGGADRHSKLVVGPMESRSQPVIAMEHELYDAHEVTGT GTIFPDDTGTPVLHMHMACGREENTVTGCIRQGVKVWQVMEVILFELTDTTASRQPDRNTGFKLLQP >Mature_147_residues MLYSEAKQGRTFIIRLEDGEIVHTALETFATEKGINAASLIILGGADRHSKLVVGPMESRSQPVIAMEHELYDAHEVTGT GTIFPDDTGTPVLHMHMACGREENTVTGCIRQGVKVWQVMEVILFELTDTTASRQPDRNTGFKLLQP
Specific function: Unknown
COG id: COG1661
COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16223; Mature: 16223
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYSEAKQGRTFIIRLEDGEIVHTALETFATEKGINAASLIILGGADRHSKLVVGPMESR CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCC SQPVIAMEHELYDAHEVTGTGTIFPDDTGTPVLHMHMACGREENTVTGCIRQGVKVWQVM CCCEEEEECCCCCCEECCCCCEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH EVILFELTDTTASRQPDRNTGFKLLQP HHHHHHHCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MLYSEAKQGRTFIIRLEDGEIVHTALETFATEKGINAASLIILGGADRHSKLVVGPMESR CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCC SQPVIAMEHELYDAHEVTGTGTIFPDDTGTPVLHMHMACGREENTVTGCIRQGVKVWQVM CCCEEEEECCCCCCEECCCCCEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH EVILFELTDTTASRQPDRNTGFKLLQP HHHHHHHCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA