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The map label for this gene is bepC [H]

Identifier: 194333624

GI number: 194333624

Start: 866032

End: 867396

Strand: Reverse

Name: bepC [H]

Synonym: Paes_0791

Alternate gene names: 194333624

Gene position: 867396-866032 (Counterclockwise)

Preceding gene: 194333625

Following gene: 194333623

Centisome position: 34.52

GC content: 53.04

Gene sequence:

>1365_bases
ATGAAACGCATACCGTTATTCATGGCACTGATCGTATGCCTGCTCTTTCCATTCCAGGGAGCAATTGCCGAAGGAAGCAT
CCCCGCAGGCAGACTGACGATCAAAGAAGCCCAGCGCCTCGCGCTGGATAATAACCCCGACATCCGTCAGGCTCTGGCAG
CAATACGGTCAGCCGAAGCGCTGCTCAGTCAGGCATATTCAGCATGGTGGCCGCAGATTTCCGCTAACGGAGGTTATTTC
CGGAAATATGCCGATATACAGCCCGACTGGCAGCCCGACAGCTCTGTTGTCAAACGATTCAATGAACTCAATGGAGGGCT
GGAAGTCAACTGGCTGCTCTTCAATGGCTTTGCCCGGCGTTCTCAAACGCTGGCCGCCAAATACGGCGTAGAGCAAACGC
ATCGGGTGAAAGAGAACACCGAACGCCTGCTGCTCGAAGCAGTTGCAACAGCATTTTATCAGTCCCAGCTCGCTCAGGAA
AAAATGCACATTGCCGAACAGAACAGCGCATTCAATCGCAGCCTTGAAAAAAACGCCTTGATCCGCTACAAAGTCGGCTC
AGCCCCGAAATCTGAAATGCTCAATTTTTCAGTTCGAGCGCTCCAGGCAGAAAGCGACTTCATCGAAGCCAAACGCGCTT
TCACCATAGCCTGCAGTGTGCTGGCAGAGCTCATGGGGCTTCCTGATGCAGATCTCAAGGAGGATCTCTACCCGGCACCG
GTTGATCAGAACGTGCAGGAAACGATACCCTCCTATGCCGAGCTGGTAGACATTGCCCTGCATCACCGTCCGGACCTTCT
TGCACTTGAATCAGCTATCGGTGCCGCCAGAGCAGAAAAAAATGCAAAAAAAGGAGCCTGGGCTCCAACGATCGGCCTCA
CTGCCGGAGTCAATTATCTGAAACAAACCGATATACATCCAGTCCAGGAAGAGGTAACCGCCTATGGAGGAGTCGGGGTG
AGCTGGGATCTCTTTACCGGTGGCAGAAGATCTGCCGAATTTCAGCAGAAAAAGGCCGACCAGCTTGCGATTGAAGAAAA
AAAACACCGCAAGGAACTCGAAATTCAATCAGCTATCCGTCAGGCACTTGCCAATGCCTCTGCGGCAAAAGAGACATGGA
AACGTCAGGATAAAGCGTGTGAGATGACCCTGAAAATCCGGAACGATATCGAAAAGCTCTATACAACAGGCTCAGCTGAT
CTGACCCGCCTCAATGAAGCGCAGACTGACCTGGTACGGGCCCAGGGACTCGGGGCGAGCAGTCTCATCCAGTTCAGACT
GGCCCTTGAGAAACTTCGATCAGAAAGCGGCCTCACGCCGGATGTCTCCATGAGCGACCCCTGGAGAGGAGAATCGGAAC
GATGA

Upstream 100 bases:

>100_bases
CGGACTGTTGGCAGCAACCTTTTTAACCCTCGGCATTGTCCCTGTGCTCTACGCACTCTTGTACGGGATTAAAGCCGATG
CAAACCATCTCTGAACCATC

Downstream 100 bases:

>100_bases
GAGAGAAAAGCACTTTCAAATGTGTATCTTGCAATAAAGCAAGCGATTCAAACTCTACCATGTATGCTCTATTCTGAAGC
AAAACAAGGCAGAACATTCA

Product: outer membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MKRIPLFMALIVCLLFPFQGAIAEGSIPAGRLTIKEAQRLALDNNPDIRQALAAIRSAEALLSQAYSAWWPQISANGGYF
RKYADIQPDWQPDSSVVKRFNELNGGLEVNWLLFNGFARRSQTLAAKYGVEQTHRVKENTERLLLEAVATAFYQSQLAQE
KMHIAEQNSAFNRSLEKNALIRYKVGSAPKSEMLNFSVRALQAESDFIEAKRAFTIACSVLAELMGLPDADLKEDLYPAP
VDQNVQETIPSYAELVDIALHHRPDLLALESAIGAARAEKNAKKGAWAPTIGLTAGVNYLKQTDIHPVQEEVTAYGGVGV
SWDLFTGGRRSAEFQQKKADQLAIEEKKHRKELEIQSAIRQALANASAAKETWKRQDKACEMTLKIRNDIEKLYTTGSAD
LTRLNEAQTDLVRAQGLGASSLIQFRLALEKLRSESGLTPDVSMSDPWRGESER

Sequences:

>Translated_454_residues
MKRIPLFMALIVCLLFPFQGAIAEGSIPAGRLTIKEAQRLALDNNPDIRQALAAIRSAEALLSQAYSAWWPQISANGGYF
RKYADIQPDWQPDSSVVKRFNELNGGLEVNWLLFNGFARRSQTLAAKYGVEQTHRVKENTERLLLEAVATAFYQSQLAQE
KMHIAEQNSAFNRSLEKNALIRYKVGSAPKSEMLNFSVRALQAESDFIEAKRAFTIACSVLAELMGLPDADLKEDLYPAP
VDQNVQETIPSYAELVDIALHHRPDLLALESAIGAARAEKNAKKGAWAPTIGLTAGVNYLKQTDIHPVQEEVTAYGGVGV
SWDLFTGGRRSAEFQQKKADQLAIEEKKHRKELEIQSAIRQALANASAAKETWKRQDKACEMTLKIRNDIEKLYTTGSAD
LTRLNEAQTDLVRAQGLGASSLIQFRLALEKLRSESGLTPDVSMSDPWRGESER
>Mature_454_residues
MKRIPLFMALIVCLLFPFQGAIAEGSIPAGRLTIKEAQRLALDNNPDIRQALAAIRSAEALLSQAYSAWWPQISANGGYF
RKYADIQPDWQPDSSVVKRFNELNGGLEVNWLLFNGFARRSQTLAAKYGVEQTHRVKENTERLLLEAVATAFYQSQLAQE
KMHIAEQNSAFNRSLEKNALIRYKVGSAPKSEMLNFSVRALQAESDFIEAKRAFTIACSVLAELMGLPDADLKEDLYPAP
VDQNVQETIPSYAELVDIALHHRPDLLALESAIGAARAEKNAKKGAWAPTIGLTAGVNYLKQTDIHPVQEEVTAYGGVGV
SWDLFTGGRRSAEFQQKKADQLAIEEKKHRKELEIQSAIRQALANASAAKETWKRQDKACEMTLKIRNDIEKLYTTGSAD
LTRLNEAQTDLVRAQGLGASSLIQFRLALEKLRSESGLTPDVSMSDPWRGESER

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 50433; Mature: 50433

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIPLFMALIVCLLFPFQGAIAEGSIPAGRLTIKEAQRLALDNNPDIRQALAAIRSAEA
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHH
LLSQAYSAWWPQISANGGYFRKYADIQPDWQPDSSVVKRFNELNGGLEVNWLLFNGFARR
HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHH
SQTLAAKYGVEQTHRVKENTERLLLEAVATAFYQSQLAQEKMHIAEQNSAFNRSLEKNAL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
IRYKVGSAPKSEMLNFSVRALQAESDFIEAKRAFTIACSVLAELMGLPDADLKEDLYPAP
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCC
VDQNVQETIPSYAELVDIALHHRPDLLALESAIGAARAEKNAKKGAWAPTIGLTAGVNYL
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
KQTDIHPVQEEVTAYGGVGVSWDLFTGGRRSAEFQQKKADQLAIEEKKHRKELEIQSAIR
HHCCCCHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QALANASAAKETWKRQDKACEMTLKIRNDIEKLYTTGSADLTRLNEAQTDLVRAQGLGAS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHH
SLIQFRLALEKLRSESGLTPDVSMSDPWRGESER
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRIPLFMALIVCLLFPFQGAIAEGSIPAGRLTIKEAQRLALDNNPDIRQALAAIRSAEA
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHH
LLSQAYSAWWPQISANGGYFRKYADIQPDWQPDSSVVKRFNELNGGLEVNWLLFNGFARR
HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHH
SQTLAAKYGVEQTHRVKENTERLLLEAVATAFYQSQLAQEKMHIAEQNSAFNRSLEKNAL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
IRYKVGSAPKSEMLNFSVRALQAESDFIEAKRAFTIACSVLAELMGLPDADLKEDLYPAP
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCC
VDQNVQETIPSYAELVDIALHHRPDLLALESAIGAARAEKNAKKGAWAPTIGLTAGVNYL
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
KQTDIHPVQEEVTAYGGVGVSWDLFTGGRRSAEFQQKKADQLAIEEKKHRKELEIQSAIR
HHCCCCHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QALANASAAKETWKRQDKACEMTLKIRNDIEKLYTTGSADLTRLNEAQTDLVRAQGLGAS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHH
SLIQFRLALEKLRSESGLTPDVSMSDPWRGESER
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]