Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is pdxA
Identifier: 194333552
GI number: 194333552
Start: 765961
End: 766977
Strand: Reverse
Name: pdxA
Synonym: Paes_0718
Alternate gene names: 194333552
Gene position: 766977-765961 (Counterclockwise)
Preceding gene: 194333553
Following gene: 194333551
Centisome position: 30.52
GC content: 53.69
Gene sequence:
>1017_bases ATGAAGACCACAGCATGGACAATTGGCGACATCCACGGTATCGGACCGGAAATCATTCTGAAAACGTTTGATGAATCGCT GCGCTCAACCGGTCAGCCAGAAGAAAAACCAATCGTTATCGGCTCGGCTGAAGCGCTTCTTTACTACAGCAAACGCCTCG GTCTGTCTATCGATATCCGTACCATCGATGCACCCGAAAAAGCCGCAGCATATCCTCAGGGAGTATTGCCGGTTATCAGC GTCGGAGAGCCATCCTCTCCTCTGCAGCCGGGCACCATCAGTGCCGAAGCAGGCCGGCTCTCAATGCTTGCAATTGAAAA AGCGGCCAATCTCTGCCTTGAAGGACGCTGTGCGGCTATGGTGACCGCCCCGATTCACAAAGAGGCCGTTGCCAGAGCAG GCTATCCCCATACCGGTCACACCGATTTTCTCGCCGACCTGTGCGCAACAGATAATCCGACCATGCTCTTCAGAGACCCT GTATCAGGACTGATGGTCGCTCTGGCGACAATTCACGTGGCGTTGCATAGAGTCCCTGAACTGATCAGATCTATGGATAT GAGCGCGTTCTTCAGCAACCTCAACCGCTCACTTCAGTCAGATTTCAGAATTGAGCAGCCCAGGATCGCGGTTCTCGGAC TCAACCCCCACGCCTCTGACGGCGGGGTCATGGGCAGGGAAGAAAAAGAGATCATTCTTCCATGCATTGACGCGCTCGCA GACAGACAGAATATTGAAGGTCCTTTTGCCGCTGATGGATTTTTCGGGTCAGGGAAATACAGGAACTACGATGTCACTGT CGCCATGTATCATGACCAGGGACTGCTTCCATTCAAAGTACTGGCATTCGACACCGGTATCAACGTCACGCTCGGCCTCC CTCTTGTCAGGACATCACCCGATCACGGCACAAGTTTCGACATTGCAGGCCAGGGCAGGGCATCACACCGAAGCTTCAGC GAAGCGGCAAAACTGGCTTGGGAAATTGCGTTCAACCGCCTCATGGAGCACTCATAG
Upstream 100 bases:
>100_bases CAGGGTTCTTCGTCCTTATCCCTGAACCACTGCTTTTCTGGCTCGCGATGAAAGGGATACAGAAAGACGAAAAAATTGCT ACCGCCTATAAACGACTCTG
Downstream 100 bases:
>100_bases AGCGCACACTCCCCCTGAAACGTCCGGCAATCGTTCAACGAATCAACAAATAAACCTTTCGCATGATATCATTTGTCAAT GTAGACCTTGAACTCGGCAA
Product: 4-hydroxythreonine-4-phosphate dehydrogenase
Products: NA
Alternate protein names: 4-(phosphohydroxy)-L-threonine dehydrogenase
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKTTAWTIGDIHGIGPEIILKTFDESLRSTGQPEEKPIVIGSAEALLYYSKRLGLSIDIRTIDAPEKAAAYPQGVLPVIS VGEPSSPLQPGTISAEAGRLSMLAIEKAANLCLEGRCAAMVTAPIHKEAVARAGYPHTGHTDFLADLCATDNPTMLFRDP VSGLMVALATIHVALHRVPELIRSMDMSAFFSNLNRSLQSDFRIEQPRIAVLGLNPHASDGGVMGREEKEIILPCIDALA DRQNIEGPFAADGFFGSGKYRNYDVTVAMYHDQGLLPFKVLAFDTGINVTLGLPLVRTSPDHGTSFDIAGQGRASHRSFS EAAKLAWEIAFNRLMEHS
Sequences:
>Translated_338_residues MKTTAWTIGDIHGIGPEIILKTFDESLRSTGQPEEKPIVIGSAEALLYYSKRLGLSIDIRTIDAPEKAAAYPQGVLPVIS VGEPSSPLQPGTISAEAGRLSMLAIEKAANLCLEGRCAAMVTAPIHKEAVARAGYPHTGHTDFLADLCATDNPTMLFRDP VSGLMVALATIHVALHRVPELIRSMDMSAFFSNLNRSLQSDFRIEQPRIAVLGLNPHASDGGVMGREEKEIILPCIDALA DRQNIEGPFAADGFFGSGKYRNYDVTVAMYHDQGLLPFKVLAFDTGINVTLGLPLVRTSPDHGTSFDIAGQGRASHRSFS EAAKLAWEIAFNRLMEHS >Mature_338_residues MKTTAWTIGDIHGIGPEIILKTFDESLRSTGQPEEKPIVIGSAEALLYYSKRLGLSIDIRTIDAPEKAAAYPQGVLPVIS VGEPSSPLQPGTISAEAGRLSMLAIEKAANLCLEGRCAAMVTAPIHKEAVARAGYPHTGHTDFLADLCATDNPTMLFRDP VSGLMVALATIHVALHRVPELIRSMDMSAFFSNLNRSLQSDFRIEQPRIAVLGLNPHASDGGVMGREEKEIILPCIDALA DRQNIEGPFAADGFFGSGKYRNYDVTVAMYHDQGLLPFKVLAFDTGINVTLGLPLVRTSPDHGTSFDIAGQGRASHRSFS EAAKLAWEIAFNRLMEHS
Specific function: Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
COG id: COG1995
COG function: function code H; Pyridoxal phosphate biosynthesis protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pdxA family
Homologues:
Organism=Escherichia coli, GI1786237, Length=327, Percent_Identity=35.7798165137615, Blast_Score=190, Evalue=1e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PDXA_PROA2 (B4S6L0)
Other databases:
- EMBL: CP001108 - RefSeq: YP_002015412.1 - ProteinModelPortal: B4S6L0 - GeneID: 6459914 - GenomeReviews: CP001108_GR - KEGG: paa:Paes_0718 - HOGENOM: HBG451136 - OMA: VTLVTIH - ProtClustDB: CLSK637382 - GO: GO:0005737 - HAMAP: MF_00536 - InterPro: IPR005255 - TIGRFAMs: TIGR00557
Pfam domain/function: PF04166 PdxA
EC number: =1.1.1.262
Molecular weight: Translated: 36521; Mature: 36521
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: BINDING 140-140 BINDING 141-141 BINDING 279-279 BINDING 288-288 BINDING 297-297
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTAWTIGDIHGIGPEIILKTFDESLRSTGQPEEKPIVIGSAEALLYYSKRLGLSIDIR CCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEHHHCCCEEEEE TIDAPEKAAAYPQGVLPVISVGEPSSPLQPGTISAEAGRLSMLAIEKAANLCLEGRCAAM ECCCCHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCCEEHHHHHHHHHHEECCCEEEE VTAPIHKEAVARAGYPHTGHTDFLADLCATDNPTMLFRDPVSGLMVALATIHVALHRVPE EECCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH LIRSMDMSAFFSNLNRSLQSDFRIEQPRIAVLGLNPHASDGGVMGREEKEIILPCIDALA HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH DRQNIEGPFAADGFFGSGKYRNYDVTVAMYHDQGLLPFKVLAFDTGINVTLGLPLVRTSP HHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEECCEEEECCC DHGTSFDIAGQGRASHRSFSEAAKLAWEIAFNRLMEHS CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTTAWTIGDIHGIGPEIILKTFDESLRSTGQPEEKPIVIGSAEALLYYSKRLGLSIDIR CCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEHHHCCCEEEEE TIDAPEKAAAYPQGVLPVISVGEPSSPLQPGTISAEAGRLSMLAIEKAANLCLEGRCAAM ECCCCHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCCEEHHHHHHHHHHEECCCEEEE VTAPIHKEAVARAGYPHTGHTDFLADLCATDNPTMLFRDPVSGLMVALATIHVALHRVPE EECCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH LIRSMDMSAFFSNLNRSLQSDFRIEQPRIAVLGLNPHASDGGVMGREEKEIILPCIDALA HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH DRQNIEGPFAADGFFGSGKYRNYDVTVAMYHDQGLLPFKVLAFDTGINVTLGLPLVRTSP HHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEECCEEEECCC DHGTSFDIAGQGRASHRSFSEAAKLAWEIAFNRLMEHS CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA