Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

Click here to switch to the map view.

The map label for this gene is 194333553

Identifier: 194333553

GI number: 194333553

Start: 766977

End: 767444

Strand: Reverse

Name: 194333553

Synonym: Paes_0719

Alternate gene names: NA

Gene position: 767444-766977 (Counterclockwise)

Preceding gene: 194333554

Following gene: 194333552

Centisome position: 30.54

GC content: 50.0

Gene sequence:

>468_bases
ATGCTTGCAAGAATTCAAACGCTCTATCTTGTCATCGCCGCCCTCCTGGCATGCTCAAGTTCGTTTCTTCCATTCTGGCA
CTTCACCGCCGAAGAGAGCATCGTTCTGTCTGATTTTGCCCCCGTTGCTGAAGCAGGTCTCATTCATACCACCACGCTCT
ACCTGTCGAGCATCCTGTCTCCGCTCAGCGCTCTGCTGTCGATTGCCGCCATTTTTTTCTATTCGAACAGACGTCTGCAA
AGCACTATGATCATAGCGCTTATCCTTCTCTTTCTTCTTGATCTGCTCTCCGGTCTTGCAGCAGCTCACTTCATGAACGA
ATGGCTACAGAACACCTCTTCATCGACACTCGAACACGCTCCGGGAGCAGGGTTCTTCGTCCTTATCCCTGAACCACTGC
TTTTCTGGCTCGCGATGAAAGGGATACAGAAAGACGAAAAAATTGCTACCGCCTATAAACGACTCTGA

Upstream 100 bases:

>100_bases
TCACCCGGATGATCATGGAACTGGCAAGAGCGTCTTAACAGCTTATTTCTTATATTTGCCCAATTGATTACCACCAACAA
GATTTAAAACGTCACCACTC

Downstream 100 bases:

>100_bases
TGAAGACCACAGCATGGACAATTGGCGACATCCACGGTATCGGACCGGAAATCATTCTGAAAACGTTTGATGAATCGCTG
CGCTCAACCGGTCAGCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MLARIQTLYLVIAALLACSSSFLPFWHFTAEESIVLSDFAPVAEAGLIHTTTLYLSSILSPLSALLSIAAIFFYSNRRLQ
STMIIALILLFLLDLLSGLAAAHFMNEWLQNTSSSTLEHAPGAGFFVLIPEPLLFWLAMKGIQKDEKIATAYKRL

Sequences:

>Translated_155_residues
MLARIQTLYLVIAALLACSSSFLPFWHFTAEESIVLSDFAPVAEAGLIHTTTLYLSSILSPLSALLSIAAIFFYSNRRLQ
STMIIALILLFLLDLLSGLAAAHFMNEWLQNTSSSTLEHAPGAGFFVLIPEPLLFWLAMKGIQKDEKIATAYKRL
>Mature_155_residues
MLARIQTLYLVIAALLACSSSFLPFWHFTAEESIVLSDFAPVAEAGLIHTTTLYLSSILSPLSALLSIAAIFFYSNRRLQ
STMIIALILLFLLDLLSGLAAAHFMNEWLQNTSSSTLEHAPGAGFFVLIPEPLLFWLAMKGIQKDEKIATAYKRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17121; Mature: 17121

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLARIQTLYLVIAALLACSSSFLPFWHFTAEESIVLSDFAPVAEAGLIHTTTLYLSSILS
CCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHCCHHHHHHCHHHHHHHHHHHHHH
PLSALLSIAAIFFYSNRRLQSTMIIALILLFLLDLLSGLAAAHFMNEWLQNTSSSTLEHA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
PGAGFFVLIPEPLLFWLAMKGIQKDEKIATAYKRL
CCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLARIQTLYLVIAALLACSSSFLPFWHFTAEESIVLSDFAPVAEAGLIHTTTLYLSSILS
CCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHCCHHHHHHCHHHHHHHHHHHHHH
PLSALLSIAAIFFYSNRRLQSTMIIALILLFLLDLLSGLAAAHFMNEWLQNTSSSTLEHA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
PGAGFFVLIPEPLLFWLAMKGIQKDEKIATAYKRL
CCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA