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The map label for this gene is exbD [C]

Identifier: 194333403

GI number: 194333403

Start: 603020

End: 603433

Strand: Reverse

Name: exbD [C]

Synonym: Paes_0560

Alternate gene names: 194333403

Gene position: 603433-603020 (Counterclockwise)

Preceding gene: 194333404

Following gene: 194333402

Centisome position: 24.01

GC content: 49.03

Gene sequence:

>414_bases
ATGCTCGAATTCGACCAACCGATCAAAAAACGCAGATGGCTCGACCTGGCCCCCATGATTGATGTCATTTTCCTGCTCTT
GATCTTTTTCATGCTGACCTCAATCTACGCCAAACCGGTCATACCGGTTGAGCTGCCGCAAGCCGGATCAAGCCAAGAAC
AGGAAAAAACAAGCATAGATATCGTCATCGACTCAAGCGGCTCAATGGCTATCAACGGAAAGAGCACATCCGAAGAGATG
TTTGCACAAACGCTTCTCGGCATGACAAACAACCCGGAAACAGCGTTCATAACCCTCTACGCAGATCAAAACATCAGCTT
CGGCCGATTCCTCTCCATTATGGACAAAACACGCTTATGCGGCATCAACAACGTGTCGATCGCTACCATCAGACCGGGGG
AACATGCACAATAG

Upstream 100 bases:

>100_bases
ATTGTACACCACCTCCTGGAGGAAAAAACCCAATCGCTATCCTTCAGCATGAAACAATACGCCACAGAAGCAATCAAACA
CCTCGGAAAGTGAAGTAATT

Downstream 100 bases:

>100_bases
AACGCTCACGAGCCTGTGCTTCATAGGCGCACTCACCCTCCATGTCCTGCCATTATTCAGCATGCCCGATAAAGAGGTAA
AGCAGTCAGTCCCTACCGTG

Product: Biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: Transport Energizing Protein ExbD/lR Family; Biopolymer Transport ExbD2 Protein; Sensor Histidine Kinase; Biopolymer Transport ExbD/lR Family Protein; Biopolymer ExbD/lR Family Transporter; Transport Energizing Protein ExbD/lR Family Protein; Biopolymer Transport Protein Exbd/lr; Biopolymer Transport Protein ExbD/lR Family

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLEFDQPIKKRRWLDLAPMIDVIFLLLIFFMLTSIYAKPVIPVELPQAGSSQEQEKTSIDIVIDSSGSMAINGKSTSEEM
FAQTLLGMTNNPETAFITLYADQNISFGRFLSIMDKTRLCGINNVSIATIRPGEHAQ

Sequences:

>Translated_137_residues
MLEFDQPIKKRRWLDLAPMIDVIFLLLIFFMLTSIYAKPVIPVELPQAGSSQEQEKTSIDIVIDSSGSMAINGKSTSEEM
FAQTLLGMTNNPETAFITLYADQNISFGRFLSIMDKTRLCGINNVSIATIRPGEHAQ
>Mature_137_residues
MLEFDQPIKKRRWLDLAPMIDVIFLLLIFFMLTSIYAKPVIPVELPQAGSSQEQEKTSIDIVIDSSGSMAINGKSTSEEM
FAQTLLGMTNNPETAFITLYADQNISFGRFLSIMDKTRLCGINNVSIATIRPGEHAQ

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. [C]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Type II Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15288; Mature: 15288

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEFDQPIKKRRWLDLAPMIDVIFLLLIFFMLTSIYAKPVIPVELPQAGSSQEQEKTSID
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEE
IVIDSSGSMAINGKSTSEEMFAQTLLGMTNNPETAFITLYADQNISFGRFLSIMDKTRLC
EEEECCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCC
GINNVSIATIRPGEHAQ
CCCCCEEEEECCCCCCC
>Mature Secondary Structure
MLEFDQPIKKRRWLDLAPMIDVIFLLLIFFMLTSIYAKPVIPVELPQAGSSQEQEKTSID
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEE
IVIDSSGSMAINGKSTSEEMFAQTLLGMTNNPETAFITLYADQNISFGRFLSIMDKTRLC
EEEECCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCC
GINNVSIATIRPGEHAQ
CCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA