Click here to switch to the map view.

The map label for this gene is exbB [C]

Identifier: 194333404

GI number: 194333404

Start: 603441

End: 604040

Strand: Reverse

Name: exbB [C]

Synonym: Paes_0561

Alternate gene names: 194333404

Gene position: 604040-603441 (Counterclockwise)

Preceding gene: 194333409

Following gene: 194333403

Centisome position: 24.04

GC content: 52.17

Gene sequence:

>600_bases
ATGTGGGATCTCTTGAACACCGGAGGGCCGATGATGTACCCGCTTCTGCTCGGCTCAATTCTCGTCGCAACATTCGCTTT
AGAACGAACGATTCATTTTTTCAGGGCCTCTTCCGGCACGCCTGCAGCTCGTCAAATACATGCATTAATCGAAAACGGCC
GAATTGAAAATGCCCTGGCACTTGCCCAACAGTCCCCTGGACCTGTTGCAGCAGTACTTGAAGCAGGGTTGGCGCATGCC
GGAAAAAACAGGAAAGAGCTTGAAGAAGAAGTGATTCTGGTCGGCAACAGAGAAATCAAAAGGCTCAACCAGCATCTTGA
CCTGATCGAACTCATCAGCCGCACCGCACCTCTTGTCGGCATCCTGGGAACAGTTCTCGGCATGGTCACCGCATTTCAAA
ACGTCGCCGATGCAGGAGGATCAGCCAATCCGGCGATCCTTGCCAGCGGCATATGGGAAGCCCTGCTGACAACTGCAGCC
GGGCTTTCGGTAGCCATTCCAGCTATGATTGTACACCACCTCCTGGAGGAAAAAACCCAATCGCTATCCTTCAGCATGAA
ACAATACGCCACAGAAGCAATCAAACACCTCGGAAAGTGA

Upstream 100 bases:

>100_bases
AAAATATTGTAGAGTTGTTTCACTTATTTTTATCTTGTCCAAATAAGAACAAAAAGATAGAAATAAAAAAATTCTTTTAA
CTCCTTCTTAAGAAAATTCA

Downstream 100 bases:

>100_bases
AGTAATTATGCTCGAATTCGACCAACCGATCAAAAAACGCAGATGGCTCGACCTGGCCCCCATGATTGATGTCATTTTCC
TGCTCTTGATCTTTTTCATG

Product: MotA/TolQ/ExbB proton channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MWDLLNTGGPMMYPLLLGSILVATFALERTIHFFRASSGTPAARQIHALIENGRIENALALAQQSPGPVAAVLEAGLAHA
GKNRKELEEEVILVGNREIKRLNQHLDLIELISRTAPLVGILGTVLGMVTAFQNVADAGGSANPAILASGIWEALLTTAA
GLSVAIPAMIVHHLLEEKTQSLSFSMKQYATEAIKHLGK

Sequences:

>Translated_199_residues
MWDLLNTGGPMMYPLLLGSILVATFALERTIHFFRASSGTPAARQIHALIENGRIENALALAQQSPGPVAAVLEAGLAHA
GKNRKELEEEVILVGNREIKRLNQHLDLIELISRTAPLVGILGTVLGMVTAFQNVADAGGSANPAILASGIWEALLTTAA
GLSVAIPAMIVHHLLEEKTQSLSFSMKQYATEAIKHLGK
>Mature_199_residues
MWDLLNTGGPMMYPLLLGSILVATFALERTIHFFRASSGTPAARQIHALIENGRIENALALAQQSPGPVAAVLEAGLAHA
GKNRKELEEEVILVGNREIKRLNQHLDLIELISRTAPLVGILGTVLGMVTAFQNVADAGGSANPAILASGIWEALLTTAA
GLSVAIPAMIVHHLLEEKTQSLSFSMKQYATEAIKHLGK

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. Protects Exbd From Proteolytic Degradation And Functionally Stabilizes Tonb. [C]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 21186; Mature: 21186

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDLLNTGGPMMYPLLLGSILVATFALERTIHFFRASSGTPAARQIHALIENGRIENALA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHH
LAQQSPGPVAAVLEAGLAHAGKNRKELEEEVILVGNREIKRLNQHLDLIELISRTAPLVG
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHH
ILGTVLGMVTAFQNVADAGGSANPAILASGIWEALLTTAAGLSVAIPAMIVHHLLEEKTQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLSFSMKQYATEAIKHLGK
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWDLLNTGGPMMYPLLLGSILVATFALERTIHFFRASSGTPAARQIHALIENGRIENALA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHH
LAQQSPGPVAAVLEAGLAHAGKNRKELEEEVILVGNREIKRLNQHLDLIELISRTAPLVG
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHH
ILGTVLGMVTAFQNVADAGGSANPAILASGIWEALLTTAAGLSVAIPAMIVHHLLEEKTQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLSFSMKQYATEAIKHLGK
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]