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The map label for this gene is recN [H]

Identifier: 194333380

GI number: 194333380

Start: 580003

End: 581709

Strand: Reverse

Name: recN [H]

Synonym: Paes_0537

Alternate gene names: 194333380

Gene position: 581709-580003 (Counterclockwise)

Preceding gene: 194333381

Following gene: 194333379

Centisome position: 23.15

GC content: 52.26

Gene sequence:

>1707_bases
ATGCTGACACATCTTTACATCAGAGACTTCGCGCTGATCGAGGAACTCTCTCTTGCATTCTCTTCGGGACTGACGATCAT
CACCGGTGAAACCGGGGCAGGCAAATCCATCCTGATGGGAGCGCTCAATCAGGTGCTCGGGGTCAGAGCAAGCACCGACC
TGGTCAGGTCCGGAAGCAAAAAAGCGGTAATCGAAGCTACCCTTACAGGATATGACCGCACAAGAACCGATCAGCTGCTT
GAAGATGCAGGCATCGACTCGGGAGAAGAGATCATTCTGCGTCGCGAAATTCAGCTCAAAGGCCAATCCCGCTGCTTCAT
CAACGACACCCCCTGCACCGTGCAGGTACTTCGCCAGATCGGCGATCAGCTCATCGATCTGCACGGGCAGCACGAACATC
AGCTGCTGCTTCATCAGGAGACGCACGGAGTCATGCTGGACCAATACGCATCCATCGAAAGCCTGACAACCCAGTACAGC
ATCGTCTACCAGCAACTGCAGGAAGAGCGCAAAAAGCTTCTTGAACTGACAATGCGGGCAGAAATGCTCGAAAAACAAAA
GGGAATGCTGGAATATCAGCACCAGGAACTCATGTCGCTCAATCTCAAAATCGATGAGGAGGCCGGTCTGGAAGAAGAGA
TCCTGCTGCTTGAAAATGCTGAAACACTCACAGAACAGTGCGACACGATCAATGATGAACTCTACGACAACGAACGCTCA
GCCTTTGTCCTGATTTCCGAAGCAGTACACCATCTTGAAAAGCTCGCCCGCATCGACACGACATTTATCGCCCGTGTCGA
AGAGCTGCAAAATGCCAGAAGTCTTGTCGAGGAACTGAGCCGGACCCTGCGAAGCTATGGCGGCGGAATCGAGTACAACC
AGGAACAGCTTGAAAACCTGCGCGAACGACAGCTCAAACTGCAGAAAATCAAAAAAAAGTATGGAAAATCAATAGAGGAA
CTTCTGCTCTTTCAGGATGAACTCTCACAGGAACTCTCCCTGCAGGAGGACCTTGATGACCGGCTGAAAGCTGTTGAGAC
AACGATAGCATCACTCAAAACCACCCTCTCAGCCATTGCCATAGAGATTCATGATGCCCGCCAGAAAGCCTCCTTTGAAC
TCCAGGAGATCATTTCGGGCGAACTTGCCGGACTCGGTATTCCTCACAGCGAGTTCAGCGTTCATCTTTCCGCCGAAGCA
TCGCCCGACGGCGACATCAGCGCCAACGGCGAATGCTATAGAGCATTTCACACCGGCTACGACATCATAGAATTTCTTAT
TTCGACCAATCCCGGAGAAGAGCCAAAGCCCCTCGGCAAAGTAGCCTCAGGGGGTGAAATTTCCAGAATCATGCTTGCCC
TGAAACGCGCTCTGGCAACCAATGCACGCCTTCCGATCCTGGTGTTCGACGAAATCGATACAGGCATCAGCGGCGCAGTG
GCCGAAGCTGTCGGCAAAAGTCTGAAAATGCTCTCCCGTCTCCATCAGATCATCTCCATCACGCATCTCCCCCAGATTGC
CGCAATGGCAGATACCCACCTGTTCGTCGAGAAAAACGTCCATGAAAACCGGACCCATACAACGGTCCGTCAACTCGATG
CCGAAGAACACCTCAAAGCAGTCGCTCAACTCTTCGGAGGTCATCATCCATCCGACGCATCGCTGAAAGTAGCAGCTCAG
CTTCTTGGAGCAGCCAAAGGGATCTGA

Upstream 100 bases:

>100_bases
GCAGTGTGCCGCATCAACAATTCAGCACGGCACTCTTTTTTATCCTGACTGCGAAACATTATCTTTTGGGCATATGGAAT
GATAACCACGCATCCGGACC

Downstream 100 bases:

>100_bases
AGCACGAAAAAACCTTTTTTACGGTAGTGATTTAGCAAAATCAATAAGTTTGCCTTATACTATCTACCATTCTCTATTGT
TTTCCAAACACACGTAAACA

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MLTHLYIRDFALIEELSLAFSSGLTIITGETGAGKSILMGALNQVLGVRASTDLVRSGSKKAVIEATLTGYDRTRTDQLL
EDAGIDSGEEIILRREIQLKGQSRCFINDTPCTVQVLRQIGDQLIDLHGQHEHQLLLHQETHGVMLDQYASIESLTTQYS
IVYQQLQEERKKLLELTMRAEMLEKQKGMLEYQHQELMSLNLKIDEEAGLEEEILLLENAETLTEQCDTINDELYDNERS
AFVLISEAVHHLEKLARIDTTFIARVEELQNARSLVEELSRTLRSYGGGIEYNQEQLENLRERQLKLQKIKKKYGKSIEE
LLLFQDELSQELSLQEDLDDRLKAVETTIASLKTTLSAIAIEIHDARQKASFELQEIISGELAGLGIPHSEFSVHLSAEA
SPDGDISANGECYRAFHTGYDIIEFLISTNPGEEPKPLGKVASGGEISRIMLALKRALATNARLPILVFDEIDTGISGAV
AEAVGKSLKMLSRLHQIISITHLPQIAAMADTHLFVEKNVHENRTHTTVRQLDAEEHLKAVAQLFGGHHPSDASLKVAAQ
LLGAAKGI

Sequences:

>Translated_568_residues
MLTHLYIRDFALIEELSLAFSSGLTIITGETGAGKSILMGALNQVLGVRASTDLVRSGSKKAVIEATLTGYDRTRTDQLL
EDAGIDSGEEIILRREIQLKGQSRCFINDTPCTVQVLRQIGDQLIDLHGQHEHQLLLHQETHGVMLDQYASIESLTTQYS
IVYQQLQEERKKLLELTMRAEMLEKQKGMLEYQHQELMSLNLKIDEEAGLEEEILLLENAETLTEQCDTINDELYDNERS
AFVLISEAVHHLEKLARIDTTFIARVEELQNARSLVEELSRTLRSYGGGIEYNQEQLENLRERQLKLQKIKKKYGKSIEE
LLLFQDELSQELSLQEDLDDRLKAVETTIASLKTTLSAIAIEIHDARQKASFELQEIISGELAGLGIPHSEFSVHLSAEA
SPDGDISANGECYRAFHTGYDIIEFLISTNPGEEPKPLGKVASGGEISRIMLALKRALATNARLPILVFDEIDTGISGAV
AEAVGKSLKMLSRLHQIISITHLPQIAAMADTHLFVEKNVHENRTHTTVRQLDAEEHLKAVAQLFGGHHPSDASLKVAAQ
LLGAAKGI
>Mature_568_residues
MLTHLYIRDFALIEELSLAFSSGLTIITGETGAGKSILMGALNQVLGVRASTDLVRSGSKKAVIEATLTGYDRTRTDQLL
EDAGIDSGEEIILRREIQLKGQSRCFINDTPCTVQVLRQIGDQLIDLHGQHEHQLLLHQETHGVMLDQYASIESLTTQYS
IVYQQLQEERKKLLELTMRAEMLEKQKGMLEYQHQELMSLNLKIDEEAGLEEEILLLENAETLTEQCDTINDELYDNERS
AFVLISEAVHHLEKLARIDTTFIARVEELQNARSLVEELSRTLRSYGGGIEYNQEQLENLRERQLKLQKIKKKYGKSIEE
LLLFQDELSQELSLQEDLDDRLKAVETTIASLKTTLSAIAIEIHDARQKASFELQEIISGELAGLGIPHSEFSVHLSAEA
SPDGDISANGECYRAFHTGYDIIEFLISTNPGEEPKPLGKVASGGEISRIMLALKRALATNARLPILVFDEIDTGISGAV
AEAVGKSLKMLSRLHQIISITHLPQIAAMADTHLFVEKNVHENRTHTTVRQLDAEEHLKAVAQLFGGHHPSDASLKVAAQ
LLGAAKGI

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=582, Percent_Identity=34.3642611683849, Blast_Score=278, Evalue=8e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 63207; Mature: 63207

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHLYIRDFALIEELSLAFSSGLTIITGETGAGKSILMGALNQVLGVRASTDLVRSGSK
CCCEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCC
KAVIEATLTGYDRTRTDQLLEDAGIDSGEEIILRREIQLKGQSRCFINDTPCTVQVLRQI
CEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEECCCCHHHHHHHHH
GDQLIDLHGQHEHQLLLHQETHGVMLDQYASIESLTTQYSIVYQQLQEERKKLLELTMRA
HHHHHHCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMLEKQKGMLEYQHQELMSLNLKIDEEAGLEEEILLLENAETLTEQCDTINDELYDNERS
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHEEEECCHHHHHHHHHCCCHHHHCCCCC
AFVLISEAVHHLEKLARIDTTFIARVEELQNARSLVEELSRTLRSYGGGIEYNQEQLENL
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RERQLKLQKIKKKYGKSIEELLLFQDELSQELSLQEDLDDRLKAVETTIASLKTTLSAIA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEIHDARQKASFELQEIISGELAGLGIPHSEFSVHLSAEASPDGDISANGECYRAFHTGY
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
DIIEFLISTNPGEEPKPLGKVASGGEISRIMLALKRALATNARLPILVFDEIDTGISGAV
HHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
AEAVGKSLKMLSRLHQIISITHLPQIAAMADTHLFVEKNVHENRTHTTVRQLDAEEHLKA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEECCCCCCHHHHHHHHCCHHHHHHH
VAQLFGGHHPSDASLKVAAQLLGAAKGI
HHHHHCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTHLYIRDFALIEELSLAFSSGLTIITGETGAGKSILMGALNQVLGVRASTDLVRSGSK
CCCEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCC
KAVIEATLTGYDRTRTDQLLEDAGIDSGEEIILRREIQLKGQSRCFINDTPCTVQVLRQI
CEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEECCCCHHHHHHHHH
GDQLIDLHGQHEHQLLLHQETHGVMLDQYASIESLTTQYSIVYQQLQEERKKLLELTMRA
HHHHHHCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMLEKQKGMLEYQHQELMSLNLKIDEEAGLEEEILLLENAETLTEQCDTINDELYDNERS
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHEEEECCHHHHHHHHHCCCHHHHCCCCC
AFVLISEAVHHLEKLARIDTTFIARVEELQNARSLVEELSRTLRSYGGGIEYNQEQLENL
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RERQLKLQKIKKKYGKSIEELLLFQDELSQELSLQEDLDDRLKAVETTIASLKTTLSAIA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEIHDARQKASFELQEIISGELAGLGIPHSEFSVHLSAEASPDGDISANGECYRAFHTGY
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
DIIEFLISTNPGEEPKPLGKVASGGEISRIMLALKRALATNARLPILVFDEIDTGISGAV
HHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
AEAVGKSLKMLSRLHQIISITHLPQIAAMADTHLFVEKNVHENRTHTTVRQLDAEEHLKA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEECCCCCCHHHHHHHHCCHHHHHHH
VAQLFGGHHPSDASLKVAAQLLGAAKGI
HHHHHCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]