Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194333381
Identifier: 194333381
GI number: 194333381
Start: 581822
End: 582829
Strand: Reverse
Name: 194333381
Synonym: Paes_0538
Alternate gene names: NA
Gene position: 582829-581822 (Counterclockwise)
Preceding gene: 194333382
Following gene: 194333380
Centisome position: 23.19
GC content: 53.87
Gene sequence:
>1008_bases ATGCACCCCCACCATCTTCTGCAGAGCGCGCTCTTGCTGTTTTTTGTCATTGGCTGCAAGGACTACCCCGATGACGCCAT TTCACCCTCAGGCCCGTCGCTGCTCCTTTCCGCACCCGAGGGTCCTGTCATCAACGAAATACACTTCGACCCGCGACAAT CATCGACTGACAACCTTGCAGATCAGCCGGATTACGTCGAAATTTACAATCCAGGCAACGCATCAGCAGACCTGACCGGC TGGACAATCGAGGACTGCCCTTCGGCTTCAGGAAAAAGGTACAGCTACCATTTTGCCGATGCGCCTTCGCCCGCCAATAT CCTCAAACCCGGAGAGTACGCCATCGTAACACCAGACAACAGTCCATCAGTCGCGGCTTCGCGGCTGGTCGGATTTTACG ACTACCTCGAACGACGTCCGGATGTCAGCATTTTCCTTGTAGAGGGAAAGGTTTTTTCCTTCAACAATGACCGCGACTGC GTCACGCTGAAAAACAGCGAGGGAACTCTGATAGACTCCGTCGCCTATGAAGAGGGATGGCACAACCCCTACATCAGGGA AACCAAGGGACGCTCCATTGAAAAATTCAACCCGCTCCTGCCATCATCGTCGCCCTCGAGCTGGACATCATCAGCCGACA ATGACTACGGCGGAACACCCGGAATACGCAACAGCGTCTATCTGACACAGCATGATCTGCAGAGAATACCCGTAATCAAG GCGATCCCCGAACAATTCTCAACACGCCAGGAGAGCATGGCGTTCGAAATCGATCTTCCCTATGGAGCATATCAGATGTC ACTCGTCATCTACGACAGCAACCTTGCAGAAGTAAAGCGCCTGGCAAACGGGCTGCCCGCCGGACCGTCGACCATCCTTG AATGGGATGGCCGGAACGACAACGGCGAAACTCTCGCATCAGGGATCTATATTGCACGTCTCAATGTGAACGGTACCACC TTGTCGACAACGCTTGAAACGACGATCACGCTGATCAGTGAGGGCTAA
Upstream 100 bases:
>100_bases AAAACAGTCCGGAGTTGAACTGCCGGACTGTTTCGCTTTGCGCTCCTGTCTACCCCGTTTTCTCCCTGTCATACTCCCAT AACACTAAACGTTCAGAACG
Downstream 100 bases:
>100_bases CCAGCCCTCACTGCAGTGTGCCGCATCAACAATTCAGCACGGCACTCTTTTTTATCCTGACTGCGAAACATTATCTTTTG GGCATATGGAATGATAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MHPHHLLQSALLLFFVIGCKDYPDDAISPSGPSLLLSAPEGPVINEIHFDPRQSSTDNLADQPDYVEIYNPGNASADLTG WTIEDCPSASGKRYSYHFADAPSPANILKPGEYAIVTPDNSPSVAASRLVGFYDYLERRPDVSIFLVEGKVFSFNNDRDC VTLKNSEGTLIDSVAYEEGWHNPYIRETKGRSIEKFNPLLPSSSPSSWTSSADNDYGGTPGIRNSVYLTQHDLQRIPVIK AIPEQFSTRQESMAFEIDLPYGAYQMSLVIYDSNLAEVKRLANGLPAGPSTILEWDGRNDNGETLASGIYIARLNVNGTT LSTTLETTITLISEG
Sequences:
>Translated_335_residues MHPHHLLQSALLLFFVIGCKDYPDDAISPSGPSLLLSAPEGPVINEIHFDPRQSSTDNLADQPDYVEIYNPGNASADLTG WTIEDCPSASGKRYSYHFADAPSPANILKPGEYAIVTPDNSPSVAASRLVGFYDYLERRPDVSIFLVEGKVFSFNNDRDC VTLKNSEGTLIDSVAYEEGWHNPYIRETKGRSIEKFNPLLPSSSPSSWTSSADNDYGGTPGIRNSVYLTQHDLQRIPVIK AIPEQFSTRQESMAFEIDLPYGAYQMSLVIYDSNLAEVKRLANGLPAGPSTILEWDGRNDNGETLASGIYIARLNVNGTT LSTTLETTITLISEG >Mature_335_residues MHPHHLLQSALLLFFVIGCKDYPDDAISPSGPSLLLSAPEGPVINEIHFDPRQSSTDNLADQPDYVEIYNPGNASADLTG WTIEDCPSASGKRYSYHFADAPSPANILKPGEYAIVTPDNSPSVAASRLVGFYDYLERRPDVSIFLVEGKVFSFNNDRDC VTLKNSEGTLIDSVAYEEGWHNPYIRETKGRSIEKFNPLLPSSSPSSWTSSADNDYGGTPGIRNSVYLTQHDLQRIPVIK AIPEQFSTRQESMAFEIDLPYGAYQMSLVIYDSNLAEVKRLANGLPAGPSTILEWDGRNDNGETLASGIYIARLNVNGTT LSTTLETTITLISEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36744; Mature: 36744
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPHHLLQSALLLFFVIGCKDYPDDAISPSGPSLLLSAPEGPVINEIHFDPRQSSTDNLA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCC DQPDYVEIYNPGNASADLTGWTIEDCPSASGKRYSYHFADAPSPANILKPGEYAIVTPDN CCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCC SPSVAASRLVGFYDYLERRPDVSIFLVEGKVFSFNNDRDCVTLKNSEGTLIDSVAYEEGW CCHHHHHHHHHHHHHHHCCCCEEEEEEECEEEEECCCCCEEEEECCCCCEEEHHHHHCCC HNPYIRETKGRSIEKFNPLLPSSSPSSWTSSADNDYGGTPGIRNSVYLTQHDLQRIPVIK CCCCEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHCCHHH AIPEQFSTRQESMAFEIDLPYGAYQMSLVIYDSNLAEVKRLANGLPAGPSTILEWDGRND HHHHHHCCHHHCEEEEEECCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCEEEEECCCCC NGETLASGIYIARLNVNGTTLSTTLETTITLISEG CCCEEECCEEEEEEECCCCEEEEEEEEEEEEEECC >Mature Secondary Structure MHPHHLLQSALLLFFVIGCKDYPDDAISPSGPSLLLSAPEGPVINEIHFDPRQSSTDNLA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCC DQPDYVEIYNPGNASADLTGWTIEDCPSASGKRYSYHFADAPSPANILKPGEYAIVTPDN CCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCC SPSVAASRLVGFYDYLERRPDVSIFLVEGKVFSFNNDRDCVTLKNSEGTLIDSVAYEEGW CCHHHHHHHHHHHHHHHCCCCEEEEEEECEEEEECCCCCEEEEECCCCCEEEHHHHHCCC HNPYIRETKGRSIEKFNPLLPSSSPSSWTSSADNDYGGTPGIRNSVYLTQHDLQRIPVIK CCCCEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHCCHHH AIPEQFSTRQESMAFEIDLPYGAYQMSLVIYDSNLAEVKRLANGLPAGPSTILEWDGRND HHHHHHCCHHHCEEEEEECCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCEEEEECCCCC NGETLASGIYIARLNVNGTTLSTTLETTITLISEG CCCEEECCEEEEEEECCCCEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA