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The map label for this gene is ytfM [C]

Identifier: 194333335

GI number: 194333335

Start: 529325

End: 531610

Strand: Reverse

Name: ytfM [C]

Synonym: Paes_0492

Alternate gene names: 194333335

Gene position: 531610-529325 (Counterclockwise)

Preceding gene: 194333336

Following gene: 194333334

Centisome position: 21.16

GC content: 49.56

Gene sequence:

>2286_bases
ATGCTCATGCTCCCGGAGCCGGTCATGAGCAGAACGAAACCGGATGCAACAGCTTCAACAGACAACGGATTTGTCAATAA
CATTGTCATTTCCGGCAACAGAGCGATTTCGACCGAAGAGATCCGCTCTGTTATGTCGACAAAAGAAAACACCCGCTATT
TCGGGGTATTCAAACCCTGGGTCGGCATCCATCGCTTTGCCGATCACCTTTTCAACGACCCACGTGGCGCCTACACACAC
AAAACCCTGCTCTCCTCGCAAAATAACGTCAAAAAATGGATGCAGGAATCCCTTGGCGAAGCCCCTATAGCATTTGTTTC
CGACGACTTCCGCCGCGACATCGCCCTGATCAAAAAACTCTATACCTATAAAGGCTATTTCTTCGCCATCATCGACACAA
CGATCCGGGCTTCAGACAACGGTGCCCAACAGAACATCTTTATCAGCATTGAGGAGAACACCCCCACCCGTATCGATACC
ATCAGCTACCAGGGGCTTGACAATCTTGACACTGCGGCAACCTCACTCTATCTCAAGCAGAGCAAACTCAAAGTCCAGGA
CATTTTCTCCGTAGATAATCTTCTTGAAGAACGCGACCGAAGCATCAATTTTTTCAAGGAGTACGGCTATGCACTCATGC
ACGAAGACAGCATCAGCATTCAGATCGACACGGTCGGCGTCCTGGCAGGAGTGAAAGTAGATCTCAGGCTTCCGCAAAAA
CTCGAATACGGACCGGTTAAGGCTGTACTCCATGATCCCCGCAAGCCTGATGATCCCAATGCCATGAGAGCGTTTTCTCT
CGACAATGTCGATGTAACCGTCTATGGAAACCCCCGGATATCTGACAAGCTTGTCACCAACTATACCGCATACCGGCCCG
GGCAGCTCACACAACAGTCGCTGCAGCAGAAAACCCTTCAGAACCTTGGATCAACGAACATCTTCTCATCAATCTTCATC
CGCAGGGATTCAGTGCAGAACGGCAAGCTCTACACCTCCATTCATCTGGAACCAAAACCCCGACATCTGATAGAGCCGAG
TATCTATGCCGACAACCGTTACGGCAACCTTTTTCTGGGAACATCGTTAGGCTACGAAAACAGAAACCTGCTGAAAAACG
CTGAAAACCTGAAAATAAAAGGGGATTTCGGCATGCAGCTCGGAACCTCAAATGATCTTCTCAGTAATCTCGAAGATGGA
CAGTATGAAAAATACCGTGCCTATGAACTCGGCTTATCGGCAAGCCTCGTCATGCCGGAACTGAAAAAACCCGGCAGCGC
CTACGAGGCAACGCTTGAATACAACCGATCCCGTCTTCCGATTCTGCTCGATAACCAGACAGGGCTTCTGCGAGCGAGCT
ACAATACCTCATTGAACCCAAGGTCACGACTCAATATTGACTTCTTTGAACTCGAATGGGTACAGAAAGACTCACTGAAT
GGTTTCAAACAGCTCTTCAAAACCGATCTTGCAGACAATATCGGCATTGATCCAACCAGTTCCATGGATGTCGACAATGC
TCTCGACAGTCTTCTGGAGACCAACATCAACCAGACCTTTCGCGTACAGTACTATTCATCGAACCGAAAGGACCCCTACA
GAACAACGACCCATACATGGAACGCCGCCGTTGAGGCAGTTGGAAGCCTTGCCTGGCTCATCGATGAATATATCGATACC
GGAAGCTATGCGGGTTACAGCGATGATGACCCTCAGATTTTCGGCACGAGCTATTCACAGTTTTTCAAAATCAGTACGCA
GTACAGTTTCACCAGAAAACTCTCAGAAAACACCGAAGTAGCCGGAAGAGTCTTTGCCGGATGGATGGCGCCATATGGAA
AAGCGGACGATACCCCCGAAGAACGTCGATTCTTCGCCGGAGGGCCAAACAGTATGAGAGGCTGGCTGTTCAATACGCTG
GGACCAGCCAGCAATGATAACGAGGTCGCTGCGAACCTCGGTGCAGATATCAGGCTGGAAGGTAATCTGGAATACAGGAT
CAAGTTCTTCAAGGTATTCGGTCAGCCATCTGGTATTGCCGTTTTTACAGACCTTGGCAACATCTGGGATCGCTCGGGCA
CCTACGGCCTCACATTCAACTCGCTCTATGAAGATATCGCATGGGATATGGGTGTCGGTCTGCGAATAGGATCTCCAATC
GGCCCGTTCCGGTTTGACTTTGCCTACAAACTCTACGATCCGTCACAGAAACCCGAGCCATGGCAGCTCTCGAACTGGAC
TCCTGGAGACTATACCTTCAATTTTGGAATTGGGGAGCCGTTTTAA

Upstream 100 bases:

>100_bases
TACGGTGACGAAGAACATTTAAGCTAAAGGAAGCCAGCATGTTTTTTTTTTGAACAAACGTATCCGGTTCATTGCCACTC
TCCTGGCATCTGTCGTTCTG

Downstream 100 bases:

>100_bases
TATCTACCTACACAGGACAAACCGCAATTTCTCAATATTAAAAGCATCATTGTTCATGCAAGCAAAGACGACACTTCTTG
CCCCCTCGATTCTTTCTGCG

Product: surface antigen

Products: NA

Alternate protein names: Outer Membrane Protein; Lipoprotein; OMP85 Family Outer Membrane Protein; Surface Antigen Protein; Surface Membrane Protein; Cell Surface Protein

Number of amino acids: Translated: 761; Mature: 761

Protein sequence:

>761_residues
MLMLPEPVMSRTKPDATASTDNGFVNNIVISGNRAISTEEIRSVMSTKENTRYFGVFKPWVGIHRFADHLFNDPRGAYTH
KTLLSSQNNVKKWMQESLGEAPIAFVSDDFRRDIALIKKLYTYKGYFFAIIDTTIRASDNGAQQNIFISIEENTPTRIDT
ISYQGLDNLDTAATSLYLKQSKLKVQDIFSVDNLLEERDRSINFFKEYGYALMHEDSISIQIDTVGVLAGVKVDLRLPQK
LEYGPVKAVLHDPRKPDDPNAMRAFSLDNVDVTVYGNPRISDKLVTNYTAYRPGQLTQQSLQQKTLQNLGSTNIFSSIFI
RRDSVQNGKLYTSIHLEPKPRHLIEPSIYADNRYGNLFLGTSLGYENRNLLKNAENLKIKGDFGMQLGTSNDLLSNLEDG
QYEKYRAYELGLSASLVMPELKKPGSAYEATLEYNRSRLPILLDNQTGLLRASYNTSLNPRSRLNIDFFELEWVQKDSLN
GFKQLFKTDLADNIGIDPTSSMDVDNALDSLLETNINQTFRVQYYSSNRKDPYRTTTHTWNAAVEAVGSLAWLIDEYIDT
GSYAGYSDDDPQIFGTSYSQFFKISTQYSFTRKLSENTEVAGRVFAGWMAPYGKADDTPEERRFFAGGPNSMRGWLFNTL
GPASNDNEVAANLGADIRLEGNLEYRIKFFKVFGQPSGIAVFTDLGNIWDRSGTYGLTFNSLYEDIAWDMGVGLRIGSPI
GPFRFDFAYKLYDPSQKPEPWQLSNWTPGDYTFNFGIGEPF

Sequences:

>Translated_761_residues
MLMLPEPVMSRTKPDATASTDNGFVNNIVISGNRAISTEEIRSVMSTKENTRYFGVFKPWVGIHRFADHLFNDPRGAYTH
KTLLSSQNNVKKWMQESLGEAPIAFVSDDFRRDIALIKKLYTYKGYFFAIIDTTIRASDNGAQQNIFISIEENTPTRIDT
ISYQGLDNLDTAATSLYLKQSKLKVQDIFSVDNLLEERDRSINFFKEYGYALMHEDSISIQIDTVGVLAGVKVDLRLPQK
LEYGPVKAVLHDPRKPDDPNAMRAFSLDNVDVTVYGNPRISDKLVTNYTAYRPGQLTQQSLQQKTLQNLGSTNIFSSIFI
RRDSVQNGKLYTSIHLEPKPRHLIEPSIYADNRYGNLFLGTSLGYENRNLLKNAENLKIKGDFGMQLGTSNDLLSNLEDG
QYEKYRAYELGLSASLVMPELKKPGSAYEATLEYNRSRLPILLDNQTGLLRASYNTSLNPRSRLNIDFFELEWVQKDSLN
GFKQLFKTDLADNIGIDPTSSMDVDNALDSLLETNINQTFRVQYYSSNRKDPYRTTTHTWNAAVEAVGSLAWLIDEYIDT
GSYAGYSDDDPQIFGTSYSQFFKISTQYSFTRKLSENTEVAGRVFAGWMAPYGKADDTPEERRFFAGGPNSMRGWLFNTL
GPASNDNEVAANLGADIRLEGNLEYRIKFFKVFGQPSGIAVFTDLGNIWDRSGTYGLTFNSLYEDIAWDMGVGLRIGSPI
GPFRFDFAYKLYDPSQKPEPWQLSNWTPGDYTFNFGIGEPF
>Mature_761_residues
MLMLPEPVMSRTKPDATASTDNGFVNNIVISGNRAISTEEIRSVMSTKENTRYFGVFKPWVGIHRFADHLFNDPRGAYTH
KTLLSSQNNVKKWMQESLGEAPIAFVSDDFRRDIALIKKLYTYKGYFFAIIDTTIRASDNGAQQNIFISIEENTPTRIDT
ISYQGLDNLDTAATSLYLKQSKLKVQDIFSVDNLLEERDRSINFFKEYGYALMHEDSISIQIDTVGVLAGVKVDLRLPQK
LEYGPVKAVLHDPRKPDDPNAMRAFSLDNVDVTVYGNPRISDKLVTNYTAYRPGQLTQQSLQQKTLQNLGSTNIFSSIFI
RRDSVQNGKLYTSIHLEPKPRHLIEPSIYADNRYGNLFLGTSLGYENRNLLKNAENLKIKGDFGMQLGTSNDLLSNLEDG
QYEKYRAYELGLSASLVMPELKKPGSAYEATLEYNRSRLPILLDNQTGLLRASYNTSLNPRSRLNIDFFELEWVQKDSLN
GFKQLFKTDLADNIGIDPTSSMDVDNALDSLLETNINQTFRVQYYSSNRKDPYRTTTHTWNAAVEAVGSLAWLIDEYIDT
GSYAGYSDDDPQIFGTSYSQFFKISTQYSFTRKLSENTEVAGRVFAGWMAPYGKADDTPEERRFFAGGPNSMRGWLFNTL
GPASNDNEVAANLGADIRLEGNLEYRIKFFKVFGQPSGIAVFTDLGNIWDRSGTYGLTFNSLYEDIAWDMGVGLRIGSPI
GPFRFDFAYKLYDPSQKPEPWQLSNWTPGDYTFNFGIGEPF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86103; Mature: 86103

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMLPEPVMSRTKPDATASTDNGFVNNIVISGNRAISTEEIRSVMSTKENTRYFGVFKPW
CCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCEECHHHHHHHHHCCCCCEEEEEECHH
VGIHRFADHLFNDPRGAYTHKTLLSSQNNVKKWMQESLGEAPIAFVSDDFRRDIALIKKL
HHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHH
YTYKGYFFAIIDTTIRASDNGAQQNIFISIEENTPTRIDTISYQGLDNLDTAATSLYLKQ
HHHCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHH
SKLKVQDIFSVDNLLEERDRSINFFKEYGYALMHEDSISIQIDTVGVLAGVKVDLRLPQK
CCCHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEECCCEEEEEEEEEEEECEEEEEECCCC
LEYGPVKAVLHDPRKPDDPNAMRAFSLDNVDVTVYGNPRISDKLVTNYTAYRPGQLTQQS
CCCCCCHHHHCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCHHHHCCCCCCCCHHHHHH
LQQKTLQNLGSTNIFSSIFIRRDSVQNGKLYTSIHLEPKPRHLIEPSIYADNRYGNLFLG
HHHHHHHHCCCHHHHHHHEEEECCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCEEEE
TSLGYENRNLLKNAENLKIKGDFGMQLGTSNDLLSNLEDGQYEKYRAYELGLSASLVMPE
CCCCCCCHHHHCCCCCEEEEECCCCEECCCHHHHHCCCCCCCHHEEEEEECCCCEEECCH
LKKPGSAYEATLEYNRSRLPILLDNQTGLLRASYNTSLNPRSRLNIDFFELEWVQKDSLN
HCCCCCCEEEEEEECCCCCCEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCHH
GFKQLFKTDLADNIGIDPTSSMDVDNALDSLLETNINQTFRVQYYSSNRKDPYRTTTHTW
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCH
NAAVEAVGSLAWLIDEYIDTGSYAGYSDDDPQIFGTSYSQFFKISTQYSFTRKLSENTEV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHEEEEECCHHHHHHHCCCCHH
AGRVFAGWMAPYGKADDTPEERRFFAGGPNSMRGWLFNTLGPASNDNEVAANLGADIRLE
HHHHHHHHCCCCCCCCCCHHHCEEECCCCCCCCCCEECCCCCCCCCCCEEECCCCEEEEE
GNLEYRIKFFKVFGQPSGIAVFTDLGNIWDRSGTYGLTFNSLYEDIAWDMGVGLRIGSPI
CCEEEEEEEEEEECCCCCEEEEECCCHHHCCCCCCEEEHHHHHHHHHHHCCCCEEECCCC
GPFRFDFAYKLYDPSQKPEPWQLSNWTPGDYTFNFGIGEPF
CCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MLMLPEPVMSRTKPDATASTDNGFVNNIVISGNRAISTEEIRSVMSTKENTRYFGVFKPW
CCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCEECHHHHHHHHHCCCCCEEEEEECHH
VGIHRFADHLFNDPRGAYTHKTLLSSQNNVKKWMQESLGEAPIAFVSDDFRRDIALIKKL
HHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHH
YTYKGYFFAIIDTTIRASDNGAQQNIFISIEENTPTRIDTISYQGLDNLDTAATSLYLKQ
HHHCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHH
SKLKVQDIFSVDNLLEERDRSINFFKEYGYALMHEDSISIQIDTVGVLAGVKVDLRLPQK
CCCHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEECCCEEEEEEEEEEEECEEEEEECCCC
LEYGPVKAVLHDPRKPDDPNAMRAFSLDNVDVTVYGNPRISDKLVTNYTAYRPGQLTQQS
CCCCCCHHHHCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCHHHHCCCCCCCCHHHHHH
LQQKTLQNLGSTNIFSSIFIRRDSVQNGKLYTSIHLEPKPRHLIEPSIYADNRYGNLFLG
HHHHHHHHCCCHHHHHHHEEEECCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCEEEE
TSLGYENRNLLKNAENLKIKGDFGMQLGTSNDLLSNLEDGQYEKYRAYELGLSASLVMPE
CCCCCCCHHHHCCCCCEEEEECCCCEECCCHHHHHCCCCCCCHHEEEEEECCCCEEECCH
LKKPGSAYEATLEYNRSRLPILLDNQTGLLRASYNTSLNPRSRLNIDFFELEWVQKDSLN
HCCCCCCEEEEEEECCCCCCEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCHH
GFKQLFKTDLADNIGIDPTSSMDVDNALDSLLETNINQTFRVQYYSSNRKDPYRTTTHTW
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCH
NAAVEAVGSLAWLIDEYIDTGSYAGYSDDDPQIFGTSYSQFFKISTQYSFTRKLSENTEV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHEEEEECCHHHHHHHCCCCHH
AGRVFAGWMAPYGKADDTPEERRFFAGGPNSMRGWLFNTLGPASNDNEVAANLGADIRLE
HHHHHHHHCCCCCCCCCCHHHCEEECCCCCCCCCCEECCCCCCCCCCCEEECCCCEEEEE
GNLEYRIKFFKVFGQPSGIAVFTDLGNIWDRSGTYGLTFNSLYEDIAWDMGVGLRIGSPI
CCEEEEEEEEEEECCCCCEEEEECCCHHHCCCCCCEEEHHHHHHHHHHHCCCCEEECCCC
GPFRFDFAYKLYDPSQKPEPWQLSNWTPGDYTFNFGIGEPF
CCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA