Click here to switch to the map view.

The map label for this gene is 194333281

Identifier: 194333281

GI number: 194333281

Start: 470628

End: 471473

Strand: Reverse

Name: 194333281

Synonym: Paes_0437

Alternate gene names: NA

Gene position: 471473-470628 (Counterclockwise)

Preceding gene: 194333287

Following gene: 194333280

Centisome position: 18.76

GC content: 49.65

Gene sequence:

>846_bases
ATGTATACAATCGTCTCTGCAAATTTTTTAGCGGAAAATATCAAAAAATTTGAAATTGAAGCTCCGCGGATAGCAAAAAA
ACGAAAAGCCGGTCAGTTCGTCATGCTTCGCGTCGGTGAGCAGGGAGAGCGTATCCCCCTCACGATAGCTGACTCTGATA
GCGAAAAAGGCACCATTACCATTATTGCTCAAGGTGCAGGGAAAACAACACGGGAACTCAACGAAAAACAAGCCGGTGAC
TCGATCAACGACATCGTAGGCCCGCTTGGAACACCTTCACACATTGAGAATTTCGGTACGGCCGTCAGCATAGGGGGTGG
CGTAGGCGCTGCTATTGCTTATCCTACCGCTGTTGCGCTCAAAGAAGCCGGCAACTATGTGATCACGATCAACGGCGCCC
GGTCAAAAGACCTCGTCATTCTCGAAAAGGAGATGAACTCGGTCAGTGATGAAGCCTATATCACAACCGATGACGGCTCA
TACGGGTTCCACGGTTTTGTCACCCAGAAACTGCAGGAACTGATCGATTCAGGCAAAAAAATAGACTACGTTCTGGCAAT
CGGCCCCATTCCAATGATGAAGGCCGTTTCGGATGTTACCCGTCCATATAACATCAAAACCGTCGTCAGTCTCAACCCGA
TCATGGTAGACGGTACAGGAATGTGCGGAGGATGCCGCGTAACCGTCGGCAATGAGCTCAAGTTCGCCTGTGTCGATGGT
CCTGAGTTCGACGCTCACCTGGTGGACTTCACCAATCTCAACGACAGAAACAAGATCTACCGGAAAGAAGAACAAGCTTC
CGACGGCTCATATCAGCACCGCTGTCACCTCGACAAGCAGATATAA

Upstream 100 bases:

>100_bases
TTTCATTTTTATATTACTTATATATTAAGTATTATAAAATTTTTGGCCCACCTGAAATTATTATCGGTACGTCTTTACAC
AATCGAAATCCTGAAGAACG

Downstream 100 bases:

>100_bases
TTATACTCTTCAATACATTCAATCCCGACCTTCAAGGTTCTGAAAGGGCCCTTGGGCGGGGATTGACAAAAATAACAAGG
GTTAACTATGGACAATAAAA

Product: ferredoxin-NADP(+) reductase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MYTIVSANFLAENIKKFEIEAPRIAKKRKAGQFVMLRVGEQGERIPLTIADSDSEKGTITIIAQGAGKTTRELNEKQAGD
SINDIVGPLGTPSHIENFGTAVSIGGGVGAAIAYPTAVALKEAGNYVITINGARSKDLVILEKEMNSVSDEAYITTDDGS
YGFHGFVTQKLQELIDSGKKIDYVLAIGPIPMMKAVSDVTRPYNIKTVVSLNPIMVDGTGMCGGCRVTVGNELKFACVDG
PEFDAHLVDFTNLNDRNKIYRKEEQASDGSYQHRCHLDKQI

Sequences:

>Translated_281_residues
MYTIVSANFLAENIKKFEIEAPRIAKKRKAGQFVMLRVGEQGERIPLTIADSDSEKGTITIIAQGAGKTTRELNEKQAGD
SINDIVGPLGTPSHIENFGTAVSIGGGVGAAIAYPTAVALKEAGNYVITINGARSKDLVILEKEMNSVSDEAYITTDDGS
YGFHGFVTQKLQELIDSGKKIDYVLAIGPIPMMKAVSDVTRPYNIKTVVSLNPIMVDGTGMCGGCRVTVGNELKFACVDG
PEFDAHLVDFTNLNDRNKIYRKEEQASDGSYQHRCHLDKQI
>Mature_281_residues
MYTIVSANFLAENIKKFEIEAPRIAKKRKAGQFVMLRVGEQGERIPLTIADSDSEKGTITIIAQGAGKTTRELNEKQAGD
SINDIVGPLGTPSHIENFGTAVSIGGGVGAAIAYPTAVALKEAGNYVITINGARSKDLVILEKEMNSVSDEAYITTDDGS
YGFHGFVTQKLQELIDSGKKIDYVLAIGPIPMMKAVSDVTRPYNIKTVVSLNPIMVDGTGMCGGCRVTVGNELKFACVDG
PEFDAHLVDFTNLNDRNKIYRKEEQASDGSYQHRCHLDKQI

Specific function: Unknown

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 30420; Mature: 30420

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTIVSANFLAENIKKFEIEAPRIAKKRKAGQFVMLRVGEQGERIPLTIADSDSEKGTIT
CEEEEEHHHHHHCHHEEECCCCHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCEEE
IIAQGAGKTTRELNEKQAGDSINDIVGPLGTPSHIENFGTAVSIGGGVGAAIAYPTAVAL
EEECCCCCCHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHH
KEAGNYVITINGARSKDLVILEKEMNSVSDEAYITTDDGSYGFHGFVTQKLQELIDSGKK
HHCCCEEEEEECCCCCCEEEEEHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCC
IDYVLAIGPIPMMKAVSDVTRPYNIKTVVSLNPIMVDGTGMCGGCRVTVGNELKFACVDG
EEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCCCEEEEECCCEEEEEECC
PEFDAHLVDFTNLNDRNKIYRKEEQASDGSYQHRCHLDKQI
CCCCEEEEEECCCCCCHHHHCCHHCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MYTIVSANFLAENIKKFEIEAPRIAKKRKAGQFVMLRVGEQGERIPLTIADSDSEKGTIT
CEEEEEHHHHHHCHHEEECCCCHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCEEE
IIAQGAGKTTRELNEKQAGDSINDIVGPLGTPSHIENFGTAVSIGGGVGAAIAYPTAVAL
EEECCCCCCHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHH
KEAGNYVITINGARSKDLVILEKEMNSVSDEAYITTDDGSYGFHGFVTQKLQELIDSGKK
HHCCCEEEEEECCCCCCEEEEEHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCC
IDYVLAIGPIPMMKAVSDVTRPYNIKTVVSLNPIMVDGTGMCGGCRVTVGNELKFACVDG
EEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCCCEEEEECCCEEEEEECC
PEFDAHLVDFTNLNDRNKIYRKEEQASDGSYQHRCHLDKQI
CCCCEEEEEECCCCCCHHHHCCHHCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA