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The map label for this gene is 194333016

Identifier: 194333016

GI number: 194333016

Start: 178499

End: 179014

Strand: Reverse

Name: 194333016

Synonym: Paes_0170

Alternate gene names: NA

Gene position: 179014-178499 (Counterclockwise)

Preceding gene: 194333017

Following gene: 194333015

Centisome position: 7.12

GC content: 48.26

Gene sequence:

>516_bases
ATGCCATTACACAAATCAAAAGTTCTCATACTCAACAGCAGCTATGAACCACTGAGTATATGTGACGCGCAAAAAGCGAT
CGTTCTGCTTTTCTGCGGAAAGGCAGTGACCGTTGCCCAGCATCCGGACCAGGTAATCCGCACGGTAAAGGAATCCTATC
CCCTGCCCTCCATCGTACGTCTTACTTTTTTCGTCAGGGTCCCCTATAAAAAGCTCATGCTCAGCAGAAAAAACATCTTC
AGACGCGACAACTTTCAGTGCCAGTACTGTGGCCGTAAAGAGCGGCTTCTGACAATCGACCATGTGCTTCCCCGTTCAAA
AGGAGGCGAAGAATCCTGGGAAAACCTCATTACCGCCTGCAGCAGCTGCAACACAAAAAAAGGCAACCGGACACCGGAAG
AAGCCGGAATGCCCCCGCTGAACCAGCCTATCCGTCCCAGTCACATCATGCTAATGCGAAAATTTATTACTACTATATCA
GAAGACTGGAAACCCTATTTATTCATGAGCCGTTAA

Upstream 100 bases:

>100_bases
AGAACAATTGCCCCCCTCCTTTCAAGGTTTAACCGAAATGTCACCTTGAACAATTGGCTTTTCAGAAATATGACTGTATA
CTCATATAAAGGGTCCAGTC

Downstream 100 bases:

>100_bases
AGACGGTCACAACGACAGAACCGACCCAGGCTATCCATATGGTGCGTCTCATAACCACATTGCTGGCACTGCTCGCAATA
CTCTGCCAGCCATATACTCT

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; Restriction Endonuclease; HNH Endonuclease Domain Protein; HNH Endonuclease Domain-Containing Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MPLHKSKVLILNSSYEPLSICDAQKAIVLLFCGKAVTVAQHPDQVIRTVKESYPLPSIVRLTFFVRVPYKKLMLSRKNIF
RRDNFQCQYCGRKERLLTIDHVLPRSKGGEESWENLITACSSCNTKKGNRTPEEAGMPPLNQPIRPSHIMLMRKFITTIS
EDWKPYLFMSR

Sequences:

>Translated_171_residues
MPLHKSKVLILNSSYEPLSICDAQKAIVLLFCGKAVTVAQHPDQVIRTVKESYPLPSIVRLTFFVRVPYKKLMLSRKNIF
RRDNFQCQYCGRKERLLTIDHVLPRSKGGEESWENLITACSSCNTKKGNRTPEEAGMPPLNQPIRPSHIMLMRKFITTIS
EDWKPYLFMSR
>Mature_170_residues
PLHKSKVLILNSSYEPLSICDAQKAIVLLFCGKAVTVAQHPDQVIRTVKESYPLPSIVRLTFFVRVPYKKLMLSRKNIFR
RDNFQCQYCGRKERLLTIDHVLPRSKGGEESWENLITACSSCNTKKGNRTPEEAGMPPLNQPIRPSHIMLMRKFITTISE
DWKPYLFMSR

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19755; Mature: 19623

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLHKSKVLILNSSYEPLSICDAQKAIVLLFCGKAVTVAQHPDQVIRTVKESYPLPSIVR
CCCCCCEEEEEECCCCCHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHCCCCHHHH
LTFFVRVPYKKLMLSRKNIFRRDNFQCQYCGRKERLLTIDHVLPRSKGGEESWENLITAC
HHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEHHHHCCCCCCCHHHHHHHHHHH
SSCNTKKGNRTPEEAGMPPLNQPIRPSHIMLMRKFITTISEDWKPYLFMSR
HCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure 
PLHKSKVLILNSSYEPLSICDAQKAIVLLFCGKAVTVAQHPDQVIRTVKESYPLPSIVR
CCCCCEEEEEECCCCCHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHCCCCHHHH
LTFFVRVPYKKLMLSRKNIFRRDNFQCQYCGRKERLLTIDHVLPRSKGGEESWENLITAC
HHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEHHHHCCCCCCCHHHHHHHHHHH
SSCNTKKGNRTPEEAGMPPLNQPIRPSHIMLMRKFITTISEDWKPYLFMSR
HCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA