Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is mnmG [H]
Identifier: 194332860
GI number: 194332860
Start: 8261
End: 10123
Strand: Reverse
Name: mnmG [H]
Synonym: Paes_0007
Alternate gene names: 194332860
Gene position: 10123-8261 (Counterclockwise)
Preceding gene: 194332868
Following gene: 194332859
Centisome position: 0.4
GC content: 47.72
Gene sequence:
>1863_bases ATGTATGATATTATTGTTGCCGGCGCAGGACATGCCGGTTGCGAGGCAGTGCTGGCAGGAGCAAGAATGGGTCACAAATG CCTGCTCATCACATCTGATCTGACAGCAATCGCACGAATGAGCTGCAACCCGGCAATTGGCGGCGTCGCAAAAGGGCAGA TAACAAGAGAGATCGACGCCCTTGGAGGCGAAATGGCAAAGGCAATTGACTCGACAGGAATACAATTTCGCATGCTCAAC AGAAGCAAAGGTCCAGCAATGCACTCCCCCAGAGCACAAGCTGACCGAAACGAGTATACTCAGTATATGCGCCGGGTTAT TGAACGCGAACCAAATATCGATCTCCTGCAGGATACCGTTATTGACATCAGAGCAGACAACGGCACCTGCCGGGGCGCCA TCATCAGTACAGGAAGAATAATCGAATGCAGATCTCTGATCCTGGCATGCGGAACATTCCTGAATGGACTGATCCATATC GGAATGAGCCACTATCCGGGAGGAAGAACACTGGCAGAACCACCGGTAGAAAAACTGACAGAAAACCTTGCAAGCCTCGG ATTCAAGCAAGGAAGATTGAAAACAGGGACACCGGCCAGAATTGACAAAAGAAGTGTCGATTATACAAAGGTTTCGGAAC AGCCTGGCGATACAGAACCAGTGCACTTCTCATTTACAACAGCACCTGCAAGAAAAGAGCAACTCAGCTGCCACCTCACA GCCACAACCGAGGAAACCCACAAGATCCTCGAAACAGGCTTTGACCGCTCACCACTCTTTTCAGGAAAAGTTCAAGGCGT CGGCCCCAGATACTGTCCGTCGATTGAAGACAAAATATTTCGATTCAAGGAGAGAAAAAGCCATCACATCTTTCTCGAAC CAGAGGGATTCGACACGAACGAAATGTATGTAAACGGCTTCTCGACATCACTACCCGAAGATATCCAGATCAAGGCAATG CGCTCTATTCCGGGTCTCGAACAGGTCAAGATCATAAGACCGGGGTATGCGATAGAATATGACTATTTCTATCCATGGCA GCTTCACCCCACAATGGAAACAAAAGTCATAGAAAACCTCTACTTCGCAGGGCAGATCAATGGCACGTCTGGCTATGAAG AAGCAGCCGCACAAGGCTTAATGGCCGGAATAAACGCTGCGTTGAAAATTGATGGGAAAACACCGTTGACGCTCAAAAGA TCCGAGGCCTATATTGGAGTTCTGATAGATGACCTGATCACGAAAGAAACAAATGAACCGTATCGGATGTTCACATCGGC AGCGGAACACAGGATCATTCTGAGGCAGGATAATGCCGACAGACGACTTACATCGTACGGTCACGCGTGTGGGTTGCAGA CCAGCGAAACAATGGAGCGTCTGCGCCAAAAAGAGGCCGCTATTCACGCAATACAGGAACTTCTGCGAGAGTTCAGAATA ACACCGGATATCCTCAAAAAACTCAGTAAACAGAACACATCAGCACTGCCGGATGAAAGCATCCGATGCATCAACCTCCT GAAACGTCCACATGTATCCCTGCAATCCATCAAGGATGCAAGCAGTGAATTTCAAGAACGCCTCAATGCCATCAGCGCTG ATCAGGATGTTCATGAACAGATTGAAATCGATATTAAATATGAAGGCTATATCAAGCGTGAACAACTGATCGCAGAAAAG ATCCTGCGCCTTGAAGACAATATCATACCTCGATCATTCGACTATATGAAGATAAAAGGACTATCAAGCGAAGGCAGAGA AAAACTTATCCGTCATCAACCCTCGACTATCGGCCAGGCATCAAGAATACTTGGTGTTACGCCTGCTGATATTTCAGTTC TTATGGTCAAGATAGGGCGGTAG
Upstream 100 bases:
>100_bases AAATATATTCCAGCATAACCACCAGTAACTCAACGTATTTTTCCTGAACGATACTGCCTCAGGAAAAATGTTTCACGTGA AACATCAAGGAAAGAAACTT
Downstream 100 bases:
>100_bases GCATCTCAAATGTTTCACGTGAAACATTCAATAAAACCCCGGCACACAACAGCAGATCAAGCCACAAACATGACGTCAAC CATCCTCGATACAATACAAC
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MYDIIVAGAGHAGCEAVLAGARMGHKCLLITSDLTAIARMSCNPAIGGVAKGQITREIDALGGEMAKAIDSTGIQFRMLN RSKGPAMHSPRAQADRNEYTQYMRRVIEREPNIDLLQDTVIDIRADNGTCRGAIISTGRIIECRSLILACGTFLNGLIHI GMSHYPGGRTLAEPPVEKLTENLASLGFKQGRLKTGTPARIDKRSVDYTKVSEQPGDTEPVHFSFTTAPARKEQLSCHLT ATTEETHKILETGFDRSPLFSGKVQGVGPRYCPSIEDKIFRFKERKSHHIFLEPEGFDTNEMYVNGFSTSLPEDIQIKAM RSIPGLEQVKIIRPGYAIEYDYFYPWQLHPTMETKVIENLYFAGQINGTSGYEEAAAQGLMAGINAALKIDGKTPLTLKR SEAYIGVLIDDLITKETNEPYRMFTSAAEHRIILRQDNADRRLTSYGHACGLQTSETMERLRQKEAAIHAIQELLREFRI TPDILKKLSKQNTSALPDESIRCINLLKRPHVSLQSIKDASSEFQERLNAISADQDVHEQIEIDIKYEGYIKREQLIAEK ILRLEDNIIPRSFDYMKIKGLSSEGREKLIRHQPSTIGQASRILGVTPADISVLMVKIGR
Sequences:
>Translated_620_residues MYDIIVAGAGHAGCEAVLAGARMGHKCLLITSDLTAIARMSCNPAIGGVAKGQITREIDALGGEMAKAIDSTGIQFRMLN RSKGPAMHSPRAQADRNEYTQYMRRVIEREPNIDLLQDTVIDIRADNGTCRGAIISTGRIIECRSLILACGTFLNGLIHI GMSHYPGGRTLAEPPVEKLTENLASLGFKQGRLKTGTPARIDKRSVDYTKVSEQPGDTEPVHFSFTTAPARKEQLSCHLT ATTEETHKILETGFDRSPLFSGKVQGVGPRYCPSIEDKIFRFKERKSHHIFLEPEGFDTNEMYVNGFSTSLPEDIQIKAM RSIPGLEQVKIIRPGYAIEYDYFYPWQLHPTMETKVIENLYFAGQINGTSGYEEAAAQGLMAGINAALKIDGKTPLTLKR SEAYIGVLIDDLITKETNEPYRMFTSAAEHRIILRQDNADRRLTSYGHACGLQTSETMERLRQKEAAIHAIQELLREFRI TPDILKKLSKQNTSALPDESIRCINLLKRPHVSLQSIKDASSEFQERLNAISADQDVHEQIEIDIKYEGYIKREQLIAEK ILRLEDNIIPRSFDYMKIKGLSSEGREKLIRHQPSTIGQASRILGVTPADISVLMVKIGR >Mature_620_residues MYDIIVAGAGHAGCEAVLAGARMGHKCLLITSDLTAIARMSCNPAIGGVAKGQITREIDALGGEMAKAIDSTGIQFRMLN RSKGPAMHSPRAQADRNEYTQYMRRVIEREPNIDLLQDTVIDIRADNGTCRGAIISTGRIIECRSLILACGTFLNGLIHI GMSHYPGGRTLAEPPVEKLTENLASLGFKQGRLKTGTPARIDKRSVDYTKVSEQPGDTEPVHFSFTTAPARKEQLSCHLT ATTEETHKILETGFDRSPLFSGKVQGVGPRYCPSIEDKIFRFKERKSHHIFLEPEGFDTNEMYVNGFSTSLPEDIQIKAM RSIPGLEQVKIIRPGYAIEYDYFYPWQLHPTMETKVIENLYFAGQINGTSGYEEAAAQGLMAGINAALKIDGKTPLTLKR SEAYIGVLIDDLITKETNEPYRMFTSAAEHRIILRQDNADRRLTSYGHACGLQTSETMERLRQKEAAIHAIQELLREFRI TPDILKKLSKQNTSALPDESIRCINLLKRPHVSLQSIKDASSEFQERLNAISADQDVHEQIEIDIKYEGYIKREQLIAEK ILRLEDNIIPRSFDYMKIKGLSSEGREKLIRHQPSTIGQASRILGVTPADISVLMVKIGR
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=632, Percent_Identity=40.5063291139241, Blast_Score=437, Evalue=1e-122, Organism=Homo sapiens, GI19882217, Length=657, Percent_Identity=38.9649923896499, Blast_Score=422, Evalue=1e-118, Organism=Homo sapiens, GI183227703, Length=672, Percent_Identity=38.0952380952381, Blast_Score=417, Evalue=1e-116, Organism=Escherichia coli, GI2367273, Length=620, Percent_Identity=48.7096774193548, Blast_Score=596, Evalue=1e-171, Organism=Caenorhabditis elegans, GI17534255, Length=620, Percent_Identity=36.4516129032258, Blast_Score=403, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6321202, Length=626, Percent_Identity=43.6102236421725, Blast_Score=479, Evalue=1e-136, Organism=Drosophila melanogaster, GI24658174, Length=626, Percent_Identity=42.0127795527157, Blast_Score=450, Evalue=1e-126,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 69187; Mature: 69187
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDIIVAGAGHAGCEAVLAGARMGHKCLLITSDLTAIARMSCNPAIGGVAKGQITREIDA CCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHH LGGEMAKAIDSTGIQFRMLNRSKGPAMHSPRAQADRNEYTQYMRRVIEREPNIDLLQDTV HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCE IDIRADNGTCRGAIISTGRIIECRSLILACGTFLNGLIHIGMSHYPGGRTLAEPPVEKLT EEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH ENLASLGFKQGRLKTGTPARIDKRSVDYTKVSEQPGDTEPVHFSFTTAPARKEQLSCHLT HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEE ATTEETHKILETGFDRSPLFSGKVQGVGPRYCPSIEDKIFRFKERKSHHIFLEPEGFDTN ECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCC EMYVNGFSTSLPEDIQIKAMRSIPGLEQVKIIRPGYAIEYDYFYPWQLHPTMETKVIENL CEEEECCCCCCCCCCEEHHHHCCCCCCCEEEECCCEEEEECEECCEEECCCHHHHHHHHE YFAGQINGTSGYEEAAAQGLMAGINAALKIDGKTPLTLKRSEAYIGVLIDDLITKETNEP EEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCEEEHHHHHHHHCCCCCH YRMFTSAAEHRIILRQDNADRRLTSYGHACGLQTSETMERLRQKEAAIHAIQELLREFRI HHHHHHHHHCEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TPDILKKLSKQNTSALPDESIRCINLLKRPHVSLQSIKDASSEFQERLNAISADQDVHEQ CHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE IEIDIKYEGYIKREQLIAEKILRLEDNIIPRSFDYMKIKGLSSEGREKLIRHQPSTIGQA EEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHCCH SRILGVTPADISVLMVKIGR HHEECCCCCCEEEEEEEECC >Mature Secondary Structure MYDIIVAGAGHAGCEAVLAGARMGHKCLLITSDLTAIARMSCNPAIGGVAKGQITREIDA CCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHH LGGEMAKAIDSTGIQFRMLNRSKGPAMHSPRAQADRNEYTQYMRRVIEREPNIDLLQDTV HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCE IDIRADNGTCRGAIISTGRIIECRSLILACGTFLNGLIHIGMSHYPGGRTLAEPPVEKLT EEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH ENLASLGFKQGRLKTGTPARIDKRSVDYTKVSEQPGDTEPVHFSFTTAPARKEQLSCHLT HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEE ATTEETHKILETGFDRSPLFSGKVQGVGPRYCPSIEDKIFRFKERKSHHIFLEPEGFDTN ECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCC EMYVNGFSTSLPEDIQIKAMRSIPGLEQVKIIRPGYAIEYDYFYPWQLHPTMETKVIENL CEEEECCCCCCCCCCEEHHHHCCCCCCCEEEECCCEEEEECEECCEEECCCHHHHHHHHE YFAGQINGTSGYEEAAAQGLMAGINAALKIDGKTPLTLKRSEAYIGVLIDDLITKETNEP EEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCEEEHHHHHHHHCCCCCH YRMFTSAAEHRIILRQDNADRRLTSYGHACGLQTSETMERLRQKEAAIHAIQELLREFRI HHHHHHHHHCEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TPDILKKLSKQNTSALPDESIRCINLLKRPHVSLQSIKDASSEFQERLNAISADQDVHEQ CHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE IEIDIKYEGYIKREQLIAEKILRLEDNIIPRSFDYMKIKGLSSEGREKLIRHQPSTIGQA EEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHCCH SRILGVTPADISVLMVKIGR HHEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA