| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213576
Identifier: 193213576
GI number: 193213576
Start: 2136360
End: 2136806
Strand: Direct
Name: 193213576
Synonym: Cpar_1937
Alternate gene names: NA
Gene position: 2136360-2136806 (Clockwise)
Preceding gene: 193213575
Following gene: 193213578
Centisome position: 93.32
GC content: 56.15
Gene sequence:
>447_bases ATGGCAGAAGAAGCAAAAACCGCTGCAGCAGAACCTACCACTGAAAAAATCGACACCATGAAGTCTTTTGACTTCGCCGT TAAAAGCATAACGGAAGCAGGAGTCAACCAGCTCAACCTTATTTCGAACACTATTGAGTCCGCAGTACCAGCCATTACCA ATGCCGCTCAAGGCATTACCGACGCTGTTTCGGCATCGGTCAAGTCGGTAAGCGAGGCTGCTGGCTCGATTACCGGCGCA TTGGGCGGACTTGGTGGCGCTGTGGTCAATCTCGCAGGAGCCGTGGCCAACTCCGCCGTTTCGGTGGCCCAGTCGGGTGT CGACACCGTCAGCAAAGCCATCTCCAAACCGGCCAGCACCGAGCCAAAAGCTGTTGCATCCCCCAAGCCAACCTACAGCA CTCCCGCCAACCCGGCCGGATCAAACCAGACCGCAGCAAAGAGCTGA
Upstream 100 bases:
>100_bases GCCCGCTAAAAAACTATCGCCGAATTCCCCGCGTTACAGCGATACGGCCAAGCAGGTACGGAGCGGAAATTCTTAAAGCT GAATCAAAGGAGAACAGATC
Downstream 100 bases:
>100_bases ACCAGCTCACGCGCCATTAAAAGCAAACCCGGAGACCTGCAAAAGAGGACTCCGGGTTACAGCGTACAGAATATCTTCCC CTCGACTCTGCGGCTAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MAEEAKTAAAEPTTEKIDTMKSFDFAVKSITEAGVNQLNLISNTIESAVPAITNAAQGITDAVSASVKSVSEAAGSITGA LGGLGGAVVNLAGAVANSAVSVAQSGVDTVSKAISKPASTEPKAVASPKPTYSTPANPAGSNQTAAKS
Sequences:
>Translated_148_residues MAEEAKTAAAEPTTEKIDTMKSFDFAVKSITEAGVNQLNLISNTIESAVPAITNAAQGITDAVSASVKSVSEAAGSITGA LGGLGGAVVNLAGAVANSAVSVAQSGVDTVSKAISKPASTEPKAVASPKPTYSTPANPAGSNQTAAKS >Mature_147_residues AEEAKTAAAEPTTEKIDTMKSFDFAVKSITEAGVNQLNLISNTIESAVPAITNAAQGITDAVSASVKSVSEAAGSITGAL GGLGGAVVNLAGAVANSAVSVAQSGVDTVSKAISKPASTEPKAVASPKPTYSTPANPAGSNQTAAKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14404; Mature: 14273
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEAKTAAAEPTTEKIDTMKSFDFAVKSITEAGVNQLNLISNTIESAVPAITNAAQGIT CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAVSASVKSVSEAAGSITGALGGLGGAVVNLAGAVANSAVSVAQSGVDTVSKAISKPAST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EPKAVASPKPTYSTPANPAGSNQTAAKS CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AEEAKTAAAEPTTEKIDTMKSFDFAVKSITEAGVNQLNLISNTIESAVPAITNAAQGIT CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAVSASVKSVSEAAGSITGALGGLGGAVVNLAGAVANSAVSVAQSGVDTVSKAISKPAST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EPKAVASPKPTYSTPANPAGSNQTAAKS CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA