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The map label for this gene is csmE [H]

Identifier: 193213575

GI number: 193213575

Start: 2135882

End: 2136139

Strand: Direct

Name: csmE [H]

Synonym: Cpar_1936

Alternate gene names: 193213575

Gene position: 2135882-2136139 (Clockwise)

Preceding gene: 193213574

Following gene: 193213576

Centisome position: 93.3

GC content: 50.0

Gene sequence:

>258_bases
ATGAACAACCCGTCAGGAGCATTCGTCCAAGGCGCTGCAGCATATGGCAGATTTCTTGAGGTTTTTATCGATGGCCACTG
GTGGGTAGTCGGTGATGCACTTGAAAATATCGGCAAAACAACAAAAAGGCTTGGTGCGAACGCCTATCCTCACCTTTATG
GTGGTGCAGGATCTGGATCCGGTCTCAGAGGCTCGTCACCTGTTGCTTCCGGATTCGCGACTCCGTCCAAAGAGGTGAAA
AGTCGTTTCAAAGACTAA

Upstream 100 bases:

>100_bases
ACTTGAGTAACGGCAACCCTGAGAATGGCTATTGCTACGATCCATTATTTTTTTTACCTTGTTACAAAGTCTGATAATCC
ATCAAAAGGAACATCTTATT

Downstream 100 bases:

>100_bases
GCGGTTACCGGCATTGGAATCTCAAAAGGGGCTTGATAGCCCCTTTTTTGTTTTCACACCTGCTGAATATTGAAGGAGTC
TGGCCGAATGAGTACATTTC

Product: bacteriochlorophyll C binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MNNPSGAFVQGAAAYGRFLEVFIDGHWWVVGDALENIGKTTKRLGANAYPHLYGGAGSGSGLRGSSPVASGFATPSKEVK
SRFKD

Sequences:

>Translated_85_residues
MNNPSGAFVQGAAAYGRFLEVFIDGHWWVVGDALENIGKTTKRLGANAYPHLYGGAGSGSGLRGSSPVASGFATPSKEVK
SRFKD
>Mature_85_residues
MNNPSGAFVQGAAAYGRFLEVFIDGHWWVVGDALENIGKTTKRLGANAYPHLYGGAGSGSGLRGSSPVASGFATPSKEVK
SRFKD

Specific function: Component of the photosynthetic apparatus. The light harvesting B740 complex binds bacteriochlorophyll c [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Chlorosome, chlorosome envelope [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BChl C/E-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001470 [H]

Pfam domain/function: PF02043 Bac_chlorC [H]

EC number: NA

Molecular weight: Translated: 8889; Mature: 8889

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNPSGAFVQGAAAYGRFLEVFIDGHWWVVGDALENIGKTTKRLGANAYPHLYGGAGSGS
CCCCCCCEEECHHHHHHHHHHEECCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GLRGSSPVASGFATPSKEVKSRFKD
CCCCCCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MNNPSGAFVQGAAAYGRFLEVFIDGHWWVVGDALENIGKTTKRLGANAYPHLYGGAGSGS
CCCCCCCEEECHHHHHHHHHHEECCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GLRGSSPVASGFATPSKEVKSRFKD
CCCCCCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]