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The map label for this gene is 193213539

Identifier: 193213539

GI number: 193213539

Start: 2097051

End: 2097914

Strand: Direct

Name: 193213539

Synonym: Cpar_1900

Alternate gene names: NA

Gene position: 2097051-2097914 (Clockwise)

Preceding gene: 193213538

Following gene: 193213540

Centisome position: 91.6

GC content: 59.26

Gene sequence:

>864_bases
ATGATGGCAATGCAGCGAAACATCAGGAACCCAGCTGTTGCAGGCGCTTTTTATCCGGCTGATCCCTCTGAACTCAACAC
TCTGCTCGCTGAGCTTTTTGAGAAAACAAGCCAGCCATCGAGCCAACCCAGCCCCAAAGCCGTCATCGTCCCGCACGCAG
GCTACCGGTTCAGTGGGCGGGTTGCCGCTCGGGCGTTTAGCACGCTGGAGGGACAGCACATCCGAACCGCGGTGCTGCTC
GGCAATGCCCACGCTGCACTGTTCGACAGCATCGCCATCGATCCGCACGACGGCTGGCGCACACCGCTGGGCACCGTACC
GTTGGACAAAATGATGCGAATCCGGCTGATCGAACTCGATCCGACACTGTATCATCAATCTGACATCGCCCACCAACGCG
ACCACGTGCTCGAAGTCCAGCTTCCGCTGCTCCAGCACGCACTGGCGTCCGGCTTCAAAATCCTGCCCGTACTATTTGGC
CAAAACCCGGCGGGTACGTACTGGCAATGCGCAGAAGCCCTCCTTTCGCTCCTCTCGGACGACGACCTGCTCATAGCCAG
CTCAGACCTGTCGCACTACCCGACCTACCACGATGCCCAAGCCATTGACACCCGAACTCTCGAACATCTGGTTGAGCTGG
ACATTCAAGGACTCGAACAGCACGAACAGGAGGTCATGCAGCGCAGAATCCCTGGCCTTGAAACCGTTTTCTGCGGCCCG
GATGCCGTCAAAACCGTCCTCGAAATCGGCAGCAGGCTAGGCTGGAAAGGCAAGCTGCTCAGCTACCGGAACAGCGGCGA
TGCCGATCAAGCCTCCCGGGATGCCGTGGTCGGTTATGGCGCAGTCATGTTCACCACCCACTGA

Upstream 100 bases:

>100_bases
CGTTAAACGCGAACGCCAGTTCATCGGAGCGCAGGTCAAACGGTTCGACGCTGGAGGTCGATGCCCATCCTGCAACCAGC
CATCGCCTGTAAAAAACTAA

Downstream 100 bases:

>100_bases
TTTACACACAACCCCTAACTCCATTTGTCATGCAGACAATCGACGACCACCCGCCAGAAGGCACGCCAGCTCCCGAACCC
TTCGTGCTCGACACCTGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MMAMQRNIRNPAVAGAFYPADPSELNTLLAELFEKTSQPSSQPSPKAVIVPHAGYRFSGRVAARAFSTLEGQHIRTAVLL
GNAHAALFDSIAIDPHDGWRTPLGTVPLDKMMRIRLIELDPTLYHQSDIAHQRDHVLEVQLPLLQHALASGFKILPVLFG
QNPAGTYWQCAEALLSLLSDDDLLIASSDLSHYPTYHDAQAIDTRTLEHLVELDIQGLEQHEQEVMQRRIPGLETVFCGP
DAVKTVLEIGSRLGWKGKLLSYRNSGDADQASRDAVVGYGAVMFTTH

Sequences:

>Translated_287_residues
MMAMQRNIRNPAVAGAFYPADPSELNTLLAELFEKTSQPSSQPSPKAVIVPHAGYRFSGRVAARAFSTLEGQHIRTAVLL
GNAHAALFDSIAIDPHDGWRTPLGTVPLDKMMRIRLIELDPTLYHQSDIAHQRDHVLEVQLPLLQHALASGFKILPVLFG
QNPAGTYWQCAEALLSLLSDDDLLIASSDLSHYPTYHDAQAIDTRTLEHLVELDIQGLEQHEQEVMQRRIPGLETVFCGP
DAVKTVLEIGSRLGWKGKLLSYRNSGDADQASRDAVVGYGAVMFTTH
>Mature_287_residues
MMAMQRNIRNPAVAGAFYPADPSELNTLLAELFEKTSQPSSQPSPKAVIVPHAGYRFSGRVAARAFSTLEGQHIRTAVLL
GNAHAALFDSIAIDPHDGWRTPLGTVPLDKMMRIRLIELDPTLYHQSDIAHQRDHVLEVQLPLLQHALASGFKILPVLFG
QNPAGTYWQCAEALLSLLSDDDLLIASSDLSHYPTYHDAQAIDTRTLEHLVELDIQGLEQHEQEVMQRRIPGLETVFCGP
DAVKTVLEIGSRLGWKGKLLSYRNSGDADQASRDAVVGYGAVMFTTH

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family [H]

Homologues:

Organism=Homo sapiens, GI7705720, Length=302, Percent_Identity=25.8278145695364, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI32566861, Length=254, Percent_Identity=25.5905511811024, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25146594, Length=254, Percent_Identity=25.5905511811024, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322467, Length=206, Percent_Identity=27.1844660194175, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020619
- InterPro:   IPR002737 [H]

Pfam domain/function: PF01875 Memo [H]

EC number: NA

Molecular weight: Translated: 31621; Mature: 31621

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAMQRNIRNPAVAGAFYPADPSELNTLLAELFEKTSQPSSQPSPKAVIVPHAGYRFSGR
CCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCH
VAARAFSTLEGQHIRTAVLLGNAHAALFDSIAIDPHDGWRTPLGTVPLDKMMRIRLIELD
HHHHHHHHCCCCCEEEEEEECCCHHHHHHHEEECCCCCCCCCCCCCCHHHHHEEEEEEEC
PTLYHQSDIAHQRDHVLEVQLPLLQHALASGFKILPVLFGQNPAGTYWQCAEALLSLLSD
CCHHCCHHHHHHHHCEEEEHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC
DDLLIASSDLSHYPTYHDAQAIDTRTLEHLVELDIQGLEQHEQEVMQRRIPGLETVFCGP
CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECH
DAVKTVLEIGSRLGWKGKLLSYRNSGDADQASRDAVVGYGAVMFTTH
HHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCEEECCEEEEECC
>Mature Secondary Structure
MMAMQRNIRNPAVAGAFYPADPSELNTLLAELFEKTSQPSSQPSPKAVIVPHAGYRFSGR
CCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCH
VAARAFSTLEGQHIRTAVLLGNAHAALFDSIAIDPHDGWRTPLGTVPLDKMMRIRLIELD
HHHHHHHHCCCCCEEEEEEECCCHHHHHHHEEECCCCCCCCCCCCCCHHHHHEEEEEEEC
PTLYHQSDIAHQRDHVLEVQLPLLQHALASGFKILPVLFGQNPAGTYWQCAEALLSLLSD
CCHHCCHHHHHHHHCEEEEHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC
DDLLIASSDLSHYPTYHDAQAIDTRTLEHLVELDIQGLEQHEQEVMQRRIPGLETVFCGP
CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECH
DAVKTVLEIGSRLGWKGKLLSYRNSGDADQASRDAVVGYGAVMFTTH
HHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]