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The map label for this gene is ycaO [H]

Identifier: 193213492

GI number: 193213492

Start: 2036208

End: 2037992

Strand: Direct

Name: ycaO [H]

Synonym: Cpar_1853

Alternate gene names: 193213492

Gene position: 2036208-2037992 (Clockwise)

Preceding gene: 193213491

Following gene: 193213493

Centisome position: 88.95

GC content: 60.73

Gene sequence:

>1785_bases
ATGAGCAGCGCGCTTGAACAGATGCGAGTCGCCTTGCGCTCAACCGGGATGGAGGTTTGCGAAAAAACCCGTCAGGGCAG
CGAACTGCCGTTTTTCACCACCATGCTCTTCGCAGGTAAAACTCCGGACGACGACTCCTTACCGCTGGTTTCCGGGCAAG
GCATCACCGCCGAAGCCTCGCTTTTGAGCGCGTACGGCGAGTTCTTTGAGCGGCTCCAGAACAACTTTATCATCGCCGGC
TACCGCTACGCCTGCGCTTCGAATGGCGGATACGACCGGCTGCCAGAGCGGTGCCGTCAGCGCCTCGACCGGCAGGGCGG
GCCGCTGGATTTTTTCATCGCGCCGGACGAAACGTGGATCGCGGCAGATCGGTTCGGTGCGGCGGAAAACCCCGACCTCA
TGCCGCGCCACCAGATGCCTGCGAGCAGTGGGGTCGATGGCGACACGCTCCTGTGCGTGCCGTTTTACTCGGTGTTCGAC
GATTCGGTACGGCTCTGCCCGATCGAACGGATGCTCTTCGCCAGCGGAAGCACAGGCTGCGCGGCCGGAAGGACTCTTGA
ACAGGCAATCGCCAAAGCGCTGTTCGAAATCTGCGAGCGGCATGTCTTTCACCGGATTTTCTCGGACGAGCCACCACTGC
CGCTCATCCCGCGCGAGCTGTTACGGAACACCGAAGCTGACCGGATCATCGAAGCCATCGAAGAGCGCAGCACAAGCGTC
ACCTTGCTCGATTGCTCGCTCGGCGCACGATTTCCAGTCGTCGCCATGCTGCTCATCGACCGCCAGCGGCAGCGCTACAA
CTGCAACCTCGGAGCCGCAGCGACGCTCTCCGGGGCAGTCATCGGAGCACTGAAAGAGCTTTACGACGGCGGCAACGACT
TCCACGCCCTGCCGCTCTCCGGCCTCGACAACCCGTTCGCGGCAACAACCGCCGATGAGAGCCACCGCCTGCGCTTCGCC
AACTACTACGCAGCCAAAGCGTCGAGCACTGGCCTCTGGCCGAAATCGCTCTTCGCCAGCCGCAACTCCGCGTCACAGTG
GATCGACGAAACCTGGAGCGACGAGCTGGCCGGCCGCCCACTCAAAGTCCTGCTCGAACGCTTCGCAAGCTGGACGCCCA
CGCTCTACATTCGCGACGTCTCGTGGCTCGGCATCCCGTCAGTCTACTGCTACGCACCCGGCCTGAGCGAGGTGAACTAC
ACCACGGGTCGCAACGAACTTACCATGCTGCTTGAGCTGCGAGCCGAAAGCGAACGTCTGCAAAGCTCCGGAGAAATGGA
GATGAAACGGTTGCTGCGAATCATGGAGCTTCACCGAAGTCTGAAACGCATCACCCTTCCGGCCTCTGTCAGGTTGCTGA
ACAGCTTTGCGTGCCCGAACCTCCCCGGCAGTGCCCGGCAGCGTGAAGCGACACTGCTCGCCGCACTCGCACAGCTTTTC
GGCGACAAAACGCCACATGACGAATCGCTGCTTGATCGATGCATCCGCGACAGCAAACAGCTTGCGGATGAAAGCTGCAA
TGCGGCGGAAATCAACTCGCAATTGCGGCAATTCTATCCTGACAGCGTGGTCGATCTGGCCGCCCGGTGCAGACAAGCGC
CAGCAGAAGTCATCGAAAATGCGCTGCATTCAATCGAACTGCCTGGCAATGAATCGGCCTGCGACGACTGCCATTTCCTG
AAAACTGTCGAAACGGCGAGGCGGCTTCAGAAACGACAGATCACCAATCTGCCCGACCAGCGCCGCCTTGCAGAAATCCT
CACAACCGCCAGGAACGAAACATGA

Upstream 100 bases:

>100_bases
TTCTGCACATACCGCCGCCAGATGATGATGAGCCTGTTCGAGCTGATGCACGAAAACATGCAGGCCGTCACCGCCTGTTT
CATGCAGAAATGAATCCGCA

Downstream 100 bases:

>100_bases
CCATCGCTCTCACCATCTTTCCCTGCTTTTCGGACAAAACGCTCCCGCTCGGCCTGGCTTGCCTGAAAAGCGTGCTGGAC
GGCGAGGGCATCGAAAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MSSALEQMRVALRSTGMEVCEKTRQGSELPFFTTMLFAGKTPDDDSLPLVSGQGITAEASLLSAYGEFFERLQNNFIIAG
YRYACASNGGYDRLPERCRQRLDRQGGPLDFFIAPDETWIAADRFGAAENPDLMPRHQMPASSGVDGDTLLCVPFYSVFD
DSVRLCPIERMLFASGSTGCAAGRTLEQAIAKALFEICERHVFHRIFSDEPPLPLIPRELLRNTEADRIIEAIEERSTSV
TLLDCSLGARFPVVAMLLIDRQRQRYNCNLGAAATLSGAVIGALKELYDGGNDFHALPLSGLDNPFAATTADESHRLRFA
NYYAAKASSTGLWPKSLFASRNSASQWIDETWSDELAGRPLKVLLERFASWTPTLYIRDVSWLGIPSVYCYAPGLSEVNY
TTGRNELTMLLELRAESERLQSSGEMEMKRLLRIMELHRSLKRITLPASVRLLNSFACPNLPGSARQREATLLAALAQLF
GDKTPHDESLLDRCIRDSKQLADESCNAAEINSQLRQFYPDSVVDLAARCRQAPAEVIENALHSIELPGNESACDDCHFL
KTVETARRLQKRQITNLPDQRRLAEILTTARNET

Sequences:

>Translated_594_residues
MSSALEQMRVALRSTGMEVCEKTRQGSELPFFTTMLFAGKTPDDDSLPLVSGQGITAEASLLSAYGEFFERLQNNFIIAG
YRYACASNGGYDRLPERCRQRLDRQGGPLDFFIAPDETWIAADRFGAAENPDLMPRHQMPASSGVDGDTLLCVPFYSVFD
DSVRLCPIERMLFASGSTGCAAGRTLEQAIAKALFEICERHVFHRIFSDEPPLPLIPRELLRNTEADRIIEAIEERSTSV
TLLDCSLGARFPVVAMLLIDRQRQRYNCNLGAAATLSGAVIGALKELYDGGNDFHALPLSGLDNPFAATTADESHRLRFA
NYYAAKASSTGLWPKSLFASRNSASQWIDETWSDELAGRPLKVLLERFASWTPTLYIRDVSWLGIPSVYCYAPGLSEVNY
TTGRNELTMLLELRAESERLQSSGEMEMKRLLRIMELHRSLKRITLPASVRLLNSFACPNLPGSARQREATLLAALAQLF
GDKTPHDESLLDRCIRDSKQLADESCNAAEINSQLRQFYPDSVVDLAARCRQAPAEVIENALHSIELPGNESACDDCHFL
KTVETARRLQKRQITNLPDQRRLAEILTTARNET
>Mature_593_residues
SSALEQMRVALRSTGMEVCEKTRQGSELPFFTTMLFAGKTPDDDSLPLVSGQGITAEASLLSAYGEFFERLQNNFIIAGY
RYACASNGGYDRLPERCRQRLDRQGGPLDFFIAPDETWIAADRFGAAENPDLMPRHQMPASSGVDGDTLLCVPFYSVFDD
SVRLCPIERMLFASGSTGCAAGRTLEQAIAKALFEICERHVFHRIFSDEPPLPLIPRELLRNTEADRIIEAIEERSTSVT
LLDCSLGARFPVVAMLLIDRQRQRYNCNLGAAATLSGAVIGALKELYDGGNDFHALPLSGLDNPFAATTADESHRLRFAN
YYAAKASSTGLWPKSLFASRNSASQWIDETWSDELAGRPLKVLLERFASWTPTLYIRDVSWLGIPSVYCYAPGLSEVNYT
TGRNELTMLLELRAESERLQSSGEMEMKRLLRIMELHRSLKRITLPASVRLLNSFACPNLPGSARQREATLLAALAQLFG
DKTPHDESLLDRCIRDSKQLADESCNAAEINSQLRQFYPDSVVDLAARCRQAPAEVIENALHSIELPGNESACDDCHFLK
TVETARRLQKRQITNLPDQRRLAEILTTARNET

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=361, Percent_Identity=25.7617728531856, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 66125; Mature: 65994

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSALEQMRVALRSTGMEVCEKTRQGSELPFFTTMLFAGKTPDDDSLPLVSGQGITAEAS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCHHHH
LLSAYGEFFERLQNNFIIAGYRYACASNGGYDRLPERCRQRLDRQGGPLDFFIAPDETWI
HHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEE
AADRFGAAENPDLMPRHQMPASSGVDGDTLLCVPFYSVFDDSVRLCPIERMLFASGSTGC
EHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCEECHHHHHHHHCCCCCC
AAGRTLEQAIAKALFEICERHVFHRIFSDEPPLPLIPRELLRNTEADRIIEAIEERSTSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCEE
TLLDCSLGARFPVVAMLLIDRQRQRYNCNLGAAATLSGAVIGALKELYDGGNDFHALPLS
EEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCC
GLDNPFAATTADESHRLRFANYYAAKASSTGLWPKSLFASRNSASQWIDETWSDELAGRP
CCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCC
LKVLLERFASWTPTLYIRDVSWLGIPSVYCYAPGLSEVNYTTGRNELTMLLELRAESERL
HHHHHHHHHCCCCEEEEECCHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QSSGEMEMKRLLRIMELHRSLKRITLPASVRLLNSFACPNLPGSARQREATLLAALAQLF
HCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
GDKTPHDESLLDRCIRDSKQLADESCNAAEINSQLRQFYPDSVVDLAARCRQAPAEVIEN
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHH
ALHSIELPGNESACDDCHFLKTVETARRLQKRQITNLPDQRRLAEILTTARNET
HHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSALEQMRVALRSTGMEVCEKTRQGSELPFFTTMLFAGKTPDDDSLPLVSGQGITAEAS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCHHHH
LLSAYGEFFERLQNNFIIAGYRYACASNGGYDRLPERCRQRLDRQGGPLDFFIAPDETWI
HHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEE
AADRFGAAENPDLMPRHQMPASSGVDGDTLLCVPFYSVFDDSVRLCPIERMLFASGSTGC
EHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCEECHHHHHHHHCCCCCC
AAGRTLEQAIAKALFEICERHVFHRIFSDEPPLPLIPRELLRNTEADRIIEAIEERSTSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCEE
TLLDCSLGARFPVVAMLLIDRQRQRYNCNLGAAATLSGAVIGALKELYDGGNDFHALPLS
EEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCC
GLDNPFAATTADESHRLRFANYYAAKASSTGLWPKSLFASRNSASQWIDETWSDELAGRP
CCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCC
LKVLLERFASWTPTLYIRDVSWLGIPSVYCYAPGLSEVNYTTGRNELTMLLELRAESERL
HHHHHHHHHCCCCEEEEECCHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QSSGEMEMKRLLRIMELHRSLKRITLPASVRLLNSFACPNLPGSARQREATLLAALAQLF
HCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
GDKTPHDESLLDRCIRDSKQLADESCNAAEINSQLRQFYPDSVVDLAARCRQAPAEVIEN
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHH
ALHSIELPGNESACDDCHFLKTVETARRLQKRQITNLPDQRRLAEILTTARNET
HHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]