| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is hldE [H]
Identifier: 193213464
GI number: 193213464
Start: 2002001
End: 2002504
Strand: Direct
Name: hldE [H]
Synonym: Cpar_1825
Alternate gene names: 193213464
Gene position: 2002001-2002504 (Clockwise)
Preceding gene: 193213457
Following gene: 193213465
Centisome position: 87.45
GC content: 60.32
Gene sequence:
>504_bases ATGCCCCCCAAAGTGCTCACCCGAGACAAAATCGAACTGAAGATTCGTGACTGGCAGGCTGCCGGAGAAAAAATCGTGTT CACCAACGGCTGTTTCGACATTCTCCACGCCGGTCATGTGCGCTATCTGTCGGCTGCCCGTGAGCTTGGTGACCGGCTCG TGGTCGGCCTGAACAGCGATGCTTCGGTCAGGCGGCTCAAAGGCCCGAAACGGCCTGTCGCGCCGCAAGATGATCGCGCC GAAGTGCTGGCCGCACTCGAAGCAGTCGATGCGGTGACGCTGTTCGGCGAGGATACCCCCGAAGAGCTGATCGGCCAGCT TCTGCCGGATGTTCTGGTCAAGGGAGCCGACTGGGCGGTCGAACAGATCGCTGGAGCGAAAGCGGTCATCGAAAACGGCG GCGCCGTCCTGACCGTACCGCTGCTCGAAGGCCGCTCGACAACGGGCATCATCGAAACCATCGTTCAACTCTACTGCCCC GAAACGACCGTTGGAAAAGGTTAA
Upstream 100 bases:
>100_bases AATCCGTGGGGAGTGAACAACTTTTTTAGGGGCTCTTGAGTCTCGGATTATATTTATTATTTAGGGATTACACCTGAAAT CTGAAGACCCGGAAAGAGAG
Downstream 100 bases:
>100_bases AAAATACAGTCACATCGTGATGACCGTTGCCTCGATTACGGTCATCGTGCTCGTCATAGCCGCAGCGGTCGTGCTGAACA GTGGCATGATCGACCTGTTC
Product: rfaE bifunctional protein
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MPPKVLTRDKIELKIRDWQAAGEKIVFTNGCFDILHAGHVRYLSAARELGDRLVVGLNSDASVRRLKGPKRPVAPQDDRA EVLAALEAVDAVTLFGEDTPEELIGQLLPDVLVKGADWAVEQIAGAKAVIENGGAVLTVPLLEGRSTTGIIETIVQLYCP ETTVGKG
Sequences:
>Translated_167_residues MPPKVLTRDKIELKIRDWQAAGEKIVFTNGCFDILHAGHVRYLSAARELGDRLVVGLNSDASVRRLKGPKRPVAPQDDRA EVLAALEAVDAVTLFGEDTPEELIGQLLPDVLVKGADWAVEQIAGAKAVIENGGAVLTVPLLEGRSTTGIIETIVQLYCP ETTVGKG >Mature_166_residues PPKVLTRDKIELKIRDWQAAGEKIVFTNGCFDILHAGHVRYLSAARELGDRLVVGLNSDASVRRLKGPKRPVAPQDDRAE VLAALEAVDAVTLFGEDTPEELIGQLLPDVLVKGADWAVEQIAGAKAVIENGGAVLTVPLLEGRSTTGIIETIVQLYCPE TTVGKG
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789432, Length=152, Percent_Identity=56.578947368421, Blast_Score=167, Evalue=4e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 17905; Mature: 17774
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPKVLTRDKIELKIRDWQAAGEKIVFTNGCFDILHAGHVRYLSAARELGDRLVVGLNSD CCCCCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHCCHHHHHHHHHHCCCEEEEEECCC ASVRRLKGPKRPVAPQDDRAEVLAALEAVDAVTLFGEDTPEELIGQLLPDVLVKGADWAV CHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHH EQIAGAKAVIENGGAVLTVPLLEGRSTTGIIETIVQLYCPETTVGKG HHHHCHHHHEECCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PPKVLTRDKIELKIRDWQAAGEKIVFTNGCFDILHAGHVRYLSAARELGDRLVVGLNSD CCCCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHCCHHHHHHHHHHCCCEEEEEECCC ASVRRLKGPKRPVAPQDDRAEVLAALEAVDAVTLFGEDTPEELIGQLLPDVLVKGADWAV CHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHH EQIAGAKAVIENGGAVLTVPLLEGRSTTGIIETIVQLYCPETTVGKG HHHHCHHHHEECCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA