| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213457
Identifier: 193213457
GI number: 193213457
Start: 1993759
End: 1994820
Strand: Direct
Name: 193213457
Synonym: Cpar_1818
Alternate gene names: NA
Gene position: 1993759-1994820 (Clockwise)
Preceding gene: 193213455
Following gene: 193213464
Centisome position: 87.09
GC content: 46.52
Gene sequence:
>1062_bases ATGGTCAAGGACGAATGCGACATCATTGAGCTTTTCGTCAGAATCAACCTGCGTTTCGTCGACAGGATGTTTCTCATCGA TAATCAGAGCAGCGACGGCACTATCGCCATTATACAGAGGATGCAGAAAGAGGGTCTCCCCGTAACTCTTTGGCATGACA ACAGCGTTGACTACCAGCAGAGTCTGGTAAGCACAAATGCGATAAGGAAAATCTTCGAAGAATACCAACCGGAATGGATT GTGCCGCTTGATGCCGACGAGTTCCTGACAGAAAACGGCAGGGAATTTCGAGCTGAACTTGAATCCATACCCGAAAACCA TTGTGGAATGCTGCAATGGCGAACATTCGTTCCCTTGTCCGTTGATTATGCTTCACTTGAAAACCCGTTATGGCATAATT TCAGACAACGGGCCAAAGAAACTACCCAGTTCAGCAAGGTAGTTATTCCGGCAGCTCTTGCAACAAACTCGAAGTTATCT CCCGGGAACCATCACCTGCTTACTGCTGACAACCGCCGTATACCGACCGTCCCCCTCACAACAACCTTGGCACATGTTCC CGTACGATCATCTGAACAAATCGTGGCAAAAAGTATCATCGGAAGCATCAAACACCAGATCACCTGGAACAGGCTGAATA ACGAAGGCTTTCACAAAGAGATAATGGCCGAAACGGTAAGAAACTGCAACTACCGCCTCGACATCCAGCAGTTACAGGAA CTGGCATTTACTTATTCACAGAGACCCGGTAAGGAAGTCATCAGGGAAATCGACAACACGATACACCTGGGAACAAAAAA CGACTGCATACAGTATCGGGAATTGGCTGTCATTAACATAATAGAGCGCTTTGACAGCTTCATGCAAGAACTTGGCAACG CACTACAGCAGGAGAATGCACACGCTCAAATCAAGCAAGCTGTCGCTTATGAAACCAGAGATCTGCTGGCAGCTCTTGAG GAAAAAGAAAAGGAAATTCGCTTTTTCAGGAAAACCGCCATAGGCAAAGCTATCAGTTACCTTGCCGGGAAAAAATTCCT TCGCAAATTTTCCAACAAGTAA
Upstream 100 bases:
>100_bases CGCAAACGAGACTGGAGAATTCTCTCAAAATTACTTTGTTATTTACAAGGGCTGAAAACAAATTAGCTGATCTCTGATGA AAAAAATAGCCTCTTTTTCG
Downstream 100 bases:
>100_bases AATTCCTCGGAAATATGAGGATGAGGAATAAGGGGTAGCCACCACTATGAGCAACCCTTTCGATCAGATAAAGCTTTTGT AACGCGTGGAGGGAAAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MVKDECDIIELFVRINLRFVDRMFLIDNQSSDGTIAIIQRMQKEGLPVTLWHDNSVDYQQSLVSTNAIRKIFEEYQPEWI VPLDADEFLTENGREFRAELESIPENHCGMLQWRTFVPLSVDYASLENPLWHNFRQRAKETTQFSKVVIPAALATNSKLS PGNHHLLTADNRRIPTVPLTTTLAHVPVRSSEQIVAKSIIGSIKHQITWNRLNNEGFHKEIMAETVRNCNYRLDIQQLQE LAFTYSQRPGKEVIREIDNTIHLGTKNDCIQYRELAVINIIERFDSFMQELGNALQQENAHAQIKQAVAYETRDLLAALE EKEKEIRFFRKTAIGKAISYLAGKKFLRKFSNK
Sequences:
>Translated_353_residues MVKDECDIIELFVRINLRFVDRMFLIDNQSSDGTIAIIQRMQKEGLPVTLWHDNSVDYQQSLVSTNAIRKIFEEYQPEWI VPLDADEFLTENGREFRAELESIPENHCGMLQWRTFVPLSVDYASLENPLWHNFRQRAKETTQFSKVVIPAALATNSKLS PGNHHLLTADNRRIPTVPLTTTLAHVPVRSSEQIVAKSIIGSIKHQITWNRLNNEGFHKEIMAETVRNCNYRLDIQQLQE LAFTYSQRPGKEVIREIDNTIHLGTKNDCIQYRELAVINIIERFDSFMQELGNALQQENAHAQIKQAVAYETRDLLAALE EKEKEIRFFRKTAIGKAISYLAGKKFLRKFSNK >Mature_353_residues MVKDECDIIELFVRINLRFVDRMFLIDNQSSDGTIAIIQRMQKEGLPVTLWHDNSVDYQQSLVSTNAIRKIFEEYQPEWI VPLDADEFLTENGREFRAELESIPENHCGMLQWRTFVPLSVDYASLENPLWHNFRQRAKETTQFSKVVIPAALATNSKLS PGNHHLLTADNRRIPTVPLTTTLAHVPVRSSEQIVAKSIIGSIKHQITWNRLNNEGFHKEIMAETVRNCNYRLDIQQLQE LAFTYSQRPGKEVIREIDNTIHLGTKNDCIQYRELAVINIIERFDSFMQELGNALQQENAHAQIKQAVAYETRDLLAALE EKEKEIRFFRKTAIGKAISYLAGKKFLRKFSNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40872; Mature: 40872
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKDECDIIELFVRINLRFVDRMFLIDNQSSDGTIAIIQRMQKEGLPVTLWHDNSVDYQQ CCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHH SLVSTNAIRKIFEEYQPEWIVPLDADEFLTENGREFRAELESIPENHCGMLQWRTFVPLS HHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCEE VDYASLENPLWHNFRQRAKETTQFSKVVIPAALATNSKLSPGNHHLLTADNRRIPTVPLT ECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHH TTLAHVPVRSSEQIVAKSIIGSIKHQITWNRLNNEGFHKEIMAETVRNCNYRLDIQQLQE HHHHHCCCCCCHHHHHHHHHHHHHHHEEHHHCCCCCHHHHHHHHHHHCCCCEECHHHHHH LAFTYSQRPGKEVIREIDNTIHLGTKNDCIQYRELAVINIIERFDSFMQELGNALQQENA HHHHHCCCCHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH HAQIKQAVAYETRDLLAALEEKEKEIRFFRKTAIGKAISYLAGKKFLRKFSNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVKDECDIIELFVRINLRFVDRMFLIDNQSSDGTIAIIQRMQKEGLPVTLWHDNSVDYQQ CCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHH SLVSTNAIRKIFEEYQPEWIVPLDADEFLTENGREFRAELESIPENHCGMLQWRTFVPLS HHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCEE VDYASLENPLWHNFRQRAKETTQFSKVVIPAALATNSKLSPGNHHLLTADNRRIPTVPLT ECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHH TTLAHVPVRSSEQIVAKSIIGSIKHQITWNRLNNEGFHKEIMAETVRNCNYRLDIQQLQE HHHHHCCCCCCHHHHHHHHHHHHHHHEEHHHCCCCCHHHHHHHHHHHCCCCEECHHHHHH LAFTYSQRPGKEVIREIDNTIHLGTKNDCIQYRELAVINIIERFDSFMQELGNALQQENA HHHHHCCCCHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH HAQIKQAVAYETRDLLAALEEKEKEIRFFRKTAIGKAISYLAGKKFLRKFSNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA