Definition Chlorobaculum parvum NCIB 8327 chromosome, complete genome.
Accession NC_011027
Length 2,289,249

Click here to switch to the map view.

The map label for this gene is 193213457

Identifier: 193213457

GI number: 193213457

Start: 1993759

End: 1994820

Strand: Direct

Name: 193213457

Synonym: Cpar_1818

Alternate gene names: NA

Gene position: 1993759-1994820 (Clockwise)

Preceding gene: 193213455

Following gene: 193213464

Centisome position: 87.09

GC content: 46.52

Gene sequence:

>1062_bases
ATGGTCAAGGACGAATGCGACATCATTGAGCTTTTCGTCAGAATCAACCTGCGTTTCGTCGACAGGATGTTTCTCATCGA
TAATCAGAGCAGCGACGGCACTATCGCCATTATACAGAGGATGCAGAAAGAGGGTCTCCCCGTAACTCTTTGGCATGACA
ACAGCGTTGACTACCAGCAGAGTCTGGTAAGCACAAATGCGATAAGGAAAATCTTCGAAGAATACCAACCGGAATGGATT
GTGCCGCTTGATGCCGACGAGTTCCTGACAGAAAACGGCAGGGAATTTCGAGCTGAACTTGAATCCATACCCGAAAACCA
TTGTGGAATGCTGCAATGGCGAACATTCGTTCCCTTGTCCGTTGATTATGCTTCACTTGAAAACCCGTTATGGCATAATT
TCAGACAACGGGCCAAAGAAACTACCCAGTTCAGCAAGGTAGTTATTCCGGCAGCTCTTGCAACAAACTCGAAGTTATCT
CCCGGGAACCATCACCTGCTTACTGCTGACAACCGCCGTATACCGACCGTCCCCCTCACAACAACCTTGGCACATGTTCC
CGTACGATCATCTGAACAAATCGTGGCAAAAAGTATCATCGGAAGCATCAAACACCAGATCACCTGGAACAGGCTGAATA
ACGAAGGCTTTCACAAAGAGATAATGGCCGAAACGGTAAGAAACTGCAACTACCGCCTCGACATCCAGCAGTTACAGGAA
CTGGCATTTACTTATTCACAGAGACCCGGTAAGGAAGTCATCAGGGAAATCGACAACACGATACACCTGGGAACAAAAAA
CGACTGCATACAGTATCGGGAATTGGCTGTCATTAACATAATAGAGCGCTTTGACAGCTTCATGCAAGAACTTGGCAACG
CACTACAGCAGGAGAATGCACACGCTCAAATCAAGCAAGCTGTCGCTTATGAAACCAGAGATCTGCTGGCAGCTCTTGAG
GAAAAAGAAAAGGAAATTCGCTTTTTCAGGAAAACCGCCATAGGCAAAGCTATCAGTTACCTTGCCGGGAAAAAATTCCT
TCGCAAATTTTCCAACAAGTAA

Upstream 100 bases:

>100_bases
CGCAAACGAGACTGGAGAATTCTCTCAAAATTACTTTGTTATTTACAAGGGCTGAAAACAAATTAGCTGATCTCTGATGA
AAAAAATAGCCTCTTTTTCG

Downstream 100 bases:

>100_bases
AATTCCTCGGAAATATGAGGATGAGGAATAAGGGGTAGCCACCACTATGAGCAACCCTTTCGATCAGATAAAGCTTTTGT
AACGCGTGGAGGGAAAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MVKDECDIIELFVRINLRFVDRMFLIDNQSSDGTIAIIQRMQKEGLPVTLWHDNSVDYQQSLVSTNAIRKIFEEYQPEWI
VPLDADEFLTENGREFRAELESIPENHCGMLQWRTFVPLSVDYASLENPLWHNFRQRAKETTQFSKVVIPAALATNSKLS
PGNHHLLTADNRRIPTVPLTTTLAHVPVRSSEQIVAKSIIGSIKHQITWNRLNNEGFHKEIMAETVRNCNYRLDIQQLQE
LAFTYSQRPGKEVIREIDNTIHLGTKNDCIQYRELAVINIIERFDSFMQELGNALQQENAHAQIKQAVAYETRDLLAALE
EKEKEIRFFRKTAIGKAISYLAGKKFLRKFSNK

Sequences:

>Translated_353_residues
MVKDECDIIELFVRINLRFVDRMFLIDNQSSDGTIAIIQRMQKEGLPVTLWHDNSVDYQQSLVSTNAIRKIFEEYQPEWI
VPLDADEFLTENGREFRAELESIPENHCGMLQWRTFVPLSVDYASLENPLWHNFRQRAKETTQFSKVVIPAALATNSKLS
PGNHHLLTADNRRIPTVPLTTTLAHVPVRSSEQIVAKSIIGSIKHQITWNRLNNEGFHKEIMAETVRNCNYRLDIQQLQE
LAFTYSQRPGKEVIREIDNTIHLGTKNDCIQYRELAVINIIERFDSFMQELGNALQQENAHAQIKQAVAYETRDLLAALE
EKEKEIRFFRKTAIGKAISYLAGKKFLRKFSNK
>Mature_353_residues
MVKDECDIIELFVRINLRFVDRMFLIDNQSSDGTIAIIQRMQKEGLPVTLWHDNSVDYQQSLVSTNAIRKIFEEYQPEWI
VPLDADEFLTENGREFRAELESIPENHCGMLQWRTFVPLSVDYASLENPLWHNFRQRAKETTQFSKVVIPAALATNSKLS
PGNHHLLTADNRRIPTVPLTTTLAHVPVRSSEQIVAKSIIGSIKHQITWNRLNNEGFHKEIMAETVRNCNYRLDIQQLQE
LAFTYSQRPGKEVIREIDNTIHLGTKNDCIQYRELAVINIIERFDSFMQELGNALQQENAHAQIKQAVAYETRDLLAALE
EKEKEIRFFRKTAIGKAISYLAGKKFLRKFSNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40872; Mature: 40872

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKDECDIIELFVRINLRFVDRMFLIDNQSSDGTIAIIQRMQKEGLPVTLWHDNSVDYQQ
CCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHH
SLVSTNAIRKIFEEYQPEWIVPLDADEFLTENGREFRAELESIPENHCGMLQWRTFVPLS
HHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCEE
VDYASLENPLWHNFRQRAKETTQFSKVVIPAALATNSKLSPGNHHLLTADNRRIPTVPLT
ECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHH
TTLAHVPVRSSEQIVAKSIIGSIKHQITWNRLNNEGFHKEIMAETVRNCNYRLDIQQLQE
HHHHHCCCCCCHHHHHHHHHHHHHHHEEHHHCCCCCHHHHHHHHHHHCCCCEECHHHHHH
LAFTYSQRPGKEVIREIDNTIHLGTKNDCIQYRELAVINIIERFDSFMQELGNALQQENA
HHHHHCCCCHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
HAQIKQAVAYETRDLLAALEEKEKEIRFFRKTAIGKAISYLAGKKFLRKFSNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKDECDIIELFVRINLRFVDRMFLIDNQSSDGTIAIIQRMQKEGLPVTLWHDNSVDYQQ
CCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHH
SLVSTNAIRKIFEEYQPEWIVPLDADEFLTENGREFRAELESIPENHCGMLQWRTFVPLS
HHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCEE
VDYASLENPLWHNFRQRAKETTQFSKVVIPAALATNSKLSPGNHHLLTADNRRIPTVPLT
ECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHH
TTLAHVPVRSSEQIVAKSIIGSIKHQITWNRLNNEGFHKEIMAETVRNCNYRLDIQQLQE
HHHHHCCCCCCHHHHHHHHHHHHHHHEEHHHCCCCCHHHHHHHHHHHCCCCEECHHHHHH
LAFTYSQRPGKEVIREIDNTIHLGTKNDCIQYRELAVINIIERFDSFMQELGNALQQENA
HHHHHCCCCHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
HAQIKQAVAYETRDLLAALEEKEKEIRFFRKTAIGKAISYLAGKKFLRKFSNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA