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The map label for this gene is lpsE [H]

Identifier: 193213443

GI number: 193213443

Start: 1975074

End: 1976156

Strand: Direct

Name: lpsE [H]

Synonym: Cpar_1804

Alternate gene names: 193213443

Gene position: 1975074-1976156 (Clockwise)

Preceding gene: 193213442

Following gene: 193213444

Centisome position: 86.28

GC content: 55.12

Gene sequence:

>1083_bases
ATGAATTTTCTCTTTCTTAATTCCGCGCGCCGTGGATGGGGCGGCAATGAAAAGTGGACCAAAATGGCTGCAGAAGCCCT
TGGCGCCAGGCATGAGGTCATGCTCGCGTACCGCGATCCGGCAATAGGTGATCGAATTGACGTTGAAAAAGTCCGCCTCC
CTTTCCGCTGGGAGTTCGATCCGACCACACTTTCCAGCCTGGTCAGGCTCGTCCGTCAAAAGAAGATCGATATCCTGATT
CCGACCAAACGTAAGGATTACGTGATTGCCGGTCTTGTCTGCCGCCTTACCGGAGCAACCAACATCCTCCGGCTCGGTAT
TGACCGCCCACCAAAAAACACCTGGATTCAGCGGCTGATCTTCGGTACGCTGACGGATGGCGTCATCATCAATGCAGAAA
AAATTCGCCAGACACTTGCCCAATCCTCATGGTTCGACACCGGCAAGGTACGGGTGATCTACAATGGAGTCGACAGGGAA
CGACTGGAACTGGACTCCGGCAATCCTTATGAAAAGCCCTTTCCATTCACGATCGGCGCTGCCGGGGCGCTCATCCCGCG
CAAAGGATTCGACTTCCTCATTCGCGCGTTCGCCCGATTTACCAGTGGCAACCAAAGTGCGACCGACAGCGGGCTCGTCA
TTGCAGGAGCGGGGCCAGAGCGGGATTCACTCGAAAAGCTCGCTACCGATCTCGGAGTTGCTAACCGGGTGCGTTTTACC
GGACATCTCAACAACCCCTACCCCATGATGCGCGCCTGCAATCTGTTTGTCTCGGCCTCGCAATCGGAAGGCTTGGCGAA
TGTGCTGCTCGAAAGCATGGCGCTCCGTTGCGTCCCTATCAGCACTCTCTCAGGTGGGGCCGATGAGCTGATCGAGGATG
GAAAAAACGGCTTTCTCGTGCAGTACGGTGACGAAGAGCAGCTCGCGGGAATCTTCGACAAATTGTACAGGAACCGCGAT
CAGGCCGATGTTCTTGCCGCGAATGCACAGCGGACGATTATGAAGCGCTTCTCCATTGAACGGATGCGCACCGACTTGCT
AAAATTCTGCTCGGAAACCCTCGATCGAAAAAAAGCCTCATGA

Upstream 100 bases:

>100_bases
CAAAAAAGGTAAGCCGATATTTTTGTAGATTGGCTTCACATGTTGTCATCTCCAACCACAACCCCAGACCCAACAGCAGC
AGCACACCTGCTCCGGACGC

Downstream 100 bases:

>100_bases
ACGTACTCTTCATCAACTCCATCGGCAAAGACAAATTCGGCGGTGGTGAAAAGTGGATGGTCAATGCCGCAAAAGGGCTG
ACTGAGCGGGGGCATAACGT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MNFLFLNSARRGWGGNEKWTKMAAEALGARHEVMLAYRDPAIGDRIDVEKVRLPFRWEFDPTTLSSLVRLVRQKKIDILI
PTKRKDYVIAGLVCRLTGATNILRLGIDRPPKNTWIQRLIFGTLTDGVIINAEKIRQTLAQSSWFDTGKVRVIYNGVDRE
RLELDSGNPYEKPFPFTIGAAGALIPRKGFDFLIRAFARFTSGNQSATDSGLVIAGAGPERDSLEKLATDLGVANRVRFT
GHLNNPYPMMRACNLFVSASQSEGLANVLLESMALRCVPISTLSGGADELIEDGKNGFLVQYGDEEQLAGIFDKLYRNRD
QADVLAANAQRTIMKRFSIERMRTDLLKFCSETLDRKKAS

Sequences:

>Translated_360_residues
MNFLFLNSARRGWGGNEKWTKMAAEALGARHEVMLAYRDPAIGDRIDVEKVRLPFRWEFDPTTLSSLVRLVRQKKIDILI
PTKRKDYVIAGLVCRLTGATNILRLGIDRPPKNTWIQRLIFGTLTDGVIINAEKIRQTLAQSSWFDTGKVRVIYNGVDRE
RLELDSGNPYEKPFPFTIGAAGALIPRKGFDFLIRAFARFTSGNQSATDSGLVIAGAGPERDSLEKLATDLGVANRVRFT
GHLNNPYPMMRACNLFVSASQSEGLANVLLESMALRCVPISTLSGGADELIEDGKNGFLVQYGDEEQLAGIFDKLYRNRD
QADVLAANAQRTIMKRFSIERMRTDLLKFCSETLDRKKAS
>Mature_360_residues
MNFLFLNSARRGWGGNEKWTKMAAEALGARHEVMLAYRDPAIGDRIDVEKVRLPFRWEFDPTTLSSLVRLVRQKKIDILI
PTKRKDYVIAGLVCRLTGATNILRLGIDRPPKNTWIQRLIFGTLTDGVIINAEKIRQTLAQSSWFDTGKVRVIYNGVDRE
RLELDSGNPYEKPFPFTIGAAGALIPRKGFDFLIRAFARFTSGNQSATDSGLVIAGAGPERDSLEKLATDLGVANRVRFT
GHLNNPYPMMRACNLFVSASQSEGLANVLLESMALRCVPISTLSGGADELIEDGKNGFLVQYGDEEQLAGIFDKLYRNRD
QADVLAANAQRTIMKRFSIERMRTDLLKFCSETLDRKKAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40253; Mature: 40253

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLFLNSARRGWGGNEKWTKMAAEALGARHEVMLAYRDPAIGDRIDVEKVRLPFRWEFD
CCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHEECCEEECCC
PTTLSSLVRLVRQKKIDILIPTKRKDYVIAGLVCRLTGATNILRLGIDRPPKNTWIQRLI
HHHHHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH
FGTLTDGVIINAEKIRQTLAQSSWFDTGKVRVIYNGVDRERLELDSGNPYEKPFPFTIGA
HHHCCCCEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCEEECC
AGALIPRKGFDFLIRAFARFTSGNQSATDSGLVIAGAGPERDSLEKLATDLGVANRVRFT
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEE
GHLNNPYPMMRACNLFVSASQSEGLANVLLESMALRCVPISTLSGGADELIEDGKNGFLV
EECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEHHCCCCHHHHHHCCCCCEEE
QYGDEEQLAGIFDKLYRNRDQADVLAANAQRTIMKRFSIERMRTDLLKFCSETLDRKKAS
EECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNFLFLNSARRGWGGNEKWTKMAAEALGARHEVMLAYRDPAIGDRIDVEKVRLPFRWEFD
CCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHEECCEEECCC
PTTLSSLVRLVRQKKIDILIPTKRKDYVIAGLVCRLTGATNILRLGIDRPPKNTWIQRLI
HHHHHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH
FGTLTDGVIINAEKIRQTLAQSSWFDTGKVRVIYNGVDRERLELDSGNPYEKPFPFTIGA
HHHCCCCEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCEEECC
AGALIPRKGFDFLIRAFARFTSGNQSATDSGLVIAGAGPERDSLEKLATDLGVANRVRFT
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEE
GHLNNPYPMMRACNLFVSASQSEGLANVLLESMALRCVPISTLSGGADELIEDGKNGFLV
EECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEHHCCCCHHHHHHCCCCCEEE
QYGDEEQLAGIFDKLYRNRDQADVLAANAQRTIMKRFSIERMRTDLLKFCSETLDRKKAS
EECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]