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The map label for this gene is lpsE [H]

Identifier: 193213444

GI number: 193213444

Start: 1976153

End: 1977292

Strand: Direct

Name: lpsE [H]

Synonym: Cpar_1805

Alternate gene names: 193213444

Gene position: 1976153-1977292 (Clockwise)

Preceding gene: 193213443

Following gene: 193213446

Centisome position: 86.32

GC content: 55.88

Gene sequence:

>1140_bases
ATGAACGTACTCTTCATCAACTCCATCGGCAAAGACAAATTCGGCGGTGGTGAAAAGTGGATGGTCAATGCCGCAAAAGG
GCTGACTGAGCGGGGGCATAACGTCGTAATGGCCAGCAGGAAAAACTCCCGCCTCCTGAAATATGCGGCTGAAAAGGGCG
TTCAGACCAAAGTCATGACTATCCGGGGCGACATCAGCCCTTTGGCGACGCTGAAAATCGCCTCGTGGATGAAGCAACAC
GAAACGGATGTGCTGATCTGCAACCTCAACAAGGATGTCCGCGTGGCTGGCCTTGCCGCCCGTCTCGTCGGCAGACCGGT
GGTGCTGGCGCGCCACGGCATGCTGCTGTGCAGCCGGAAATGGAAACACAAGCTCACCCTCACCAGACTGACCGACGGCA
TCATCACCAACAGCCAGACCATCAGAAAAGCCTATGCTGAGTATGGCTGGTTCAGCGAAAACTTCGTCAAGGTGATCTAC
AACGGCCTGATTATTCCCGAAAAGGTCACAGCATTCGATTTCGCCTCGCGCTTCCCCGGCAAAAAGATCATCTACAGCGC
CGGACGCCTCTCCAAACAGAAAGGGTTCGAGTACCTGATTGAAGCGGCCGCCATCCTGAAACGCAAACGCAACGACCTCG
TGTTCGCCATCTCGGGTGAAGGCAAACTTGAAAGCGAACTGAGCAACCAGATCAGGACGCTCGGTCTCGAAGACAGCTTC
GTCTTACTCGGCTTCACGCCCGACATTTACCCGTGCCTGAAAGGGTGCGACCTGTTCGTGCTGGCCTCGCTGTTCGAAGG
CATGCCCAACGTGGTCATGGAGGCGATGGCCATGCAGAAACCGGTCATAGCGACCGACGTGAACGGCGCACGCGAACTGA
TGGGAGCAAGCGCGGAAAGCCTGCGCTGCGACACGGGCCTCATCATCCCGCCGAAAGAGCCGCAAGCCATCGCCGAAGCC
ATCGAAAAGCTGATCGACAATCCTGAAGCTGCCGAAGCCTGCGGAAAGGCGGGCCATGAACGAGTGAAAAACAACTTCAC
CATGCAGGCGATGGTCAACAATCTCGAAGAGCACCTGCGCAACAAAATCGCTGAAAAACGCAGCACAGGTCAAGAGACAA
AAACAGATCCTGCTTCGTAA

Upstream 100 bases:

>100_bases
CGAATGCACAGCGGACGATTATGAAGCGCTTCTCCATTGAACGGATGCGCACCGACTTGCTAAAATTCTGCTCGGAAACC
CTCGATCGAAAAAAAGCCTC

Downstream 100 bases:

>100_bases
AACCGCGCTATGCCCGGTAGGAGCCTACCTGCTGCCGATGCTGCCATTCGTAGGTTCCAATCGGGCATAGACTTTTCGGA
AAGCCTGCTGAACCGCATCG

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MNVLFINSIGKDKFGGGEKWMVNAAKGLTERGHNVVMASRKNSRLLKYAAEKGVQTKVMTIRGDISPLATLKIASWMKQH
ETDVLICNLNKDVRVAGLAARLVGRPVVLARHGMLLCSRKWKHKLTLTRLTDGIITNSQTIRKAYAEYGWFSENFVKVIY
NGLIIPEKVTAFDFASRFPGKKIIYSAGRLSKQKGFEYLIEAAAILKRKRNDLVFAISGEGKLESELSNQIRTLGLEDSF
VLLGFTPDIYPCLKGCDLFVLASLFEGMPNVVMEAMAMQKPVIATDVNGARELMGASAESLRCDTGLIIPPKEPQAIAEA
IEKLIDNPEAAEACGKAGHERVKNNFTMQAMVNNLEEHLRNKIAEKRSTGQETKTDPAS

Sequences:

>Translated_379_residues
MNVLFINSIGKDKFGGGEKWMVNAAKGLTERGHNVVMASRKNSRLLKYAAEKGVQTKVMTIRGDISPLATLKIASWMKQH
ETDVLICNLNKDVRVAGLAARLVGRPVVLARHGMLLCSRKWKHKLTLTRLTDGIITNSQTIRKAYAEYGWFSENFVKVIY
NGLIIPEKVTAFDFASRFPGKKIIYSAGRLSKQKGFEYLIEAAAILKRKRNDLVFAISGEGKLESELSNQIRTLGLEDSF
VLLGFTPDIYPCLKGCDLFVLASLFEGMPNVVMEAMAMQKPVIATDVNGARELMGASAESLRCDTGLIIPPKEPQAIAEA
IEKLIDNPEAAEACGKAGHERVKNNFTMQAMVNNLEEHLRNKIAEKRSTGQETKTDPAS
>Mature_379_residues
MNVLFINSIGKDKFGGGEKWMVNAAKGLTERGHNVVMASRKNSRLLKYAAEKGVQTKVMTIRGDISPLATLKIASWMKQH
ETDVLICNLNKDVRVAGLAARLVGRPVVLARHGMLLCSRKWKHKLTLTRLTDGIITNSQTIRKAYAEYGWFSENFVKVIY
NGLIIPEKVTAFDFASRFPGKKIIYSAGRLSKQKGFEYLIEAAAILKRKRNDLVFAISGEGKLESELSNQIRTLGLEDSF
VLLGFTPDIYPCLKGCDLFVLASLFEGMPNVVMEAMAMQKPVIATDVNGARELMGASAESLRCDTGLIIPPKEPQAIAEA
IEKLIDNPEAAEACGKAGHERVKNNFTMQAMVNNLEEHLRNKIAEKRSTGQETKTDPAS

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=187, Percent_Identity=30.4812834224599, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41873; Mature: 41873

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLFINSIGKDKFGGGEKWMVNAAKGLTERGHNVVMASRKNSRLLKYAAEKGVQTKVMT
CCEEEEECCCCCCCCCCCCEEEEHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEEEEE
IRGDISPLATLKIASWMKQHETDVLICNLNKDVRVAGLAARLVGRPVVLARHGMLLCSRK
EECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEHHCCHHHHCCH
WKHKLTLTRLTDGIITNSQTIRKAYAEYGWFSENFVKVIYNGLIIPEKVTAFDFASRFPG
HHHEEEHHHHHCCHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
KKIIYSAGRLSKQKGFEYLIEAAAILKRKRNDLVFAISGEGKLESELSNQIRTLGLEDSF
CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCE
VLLGFTPDIYPCLKGCDLFVLASLFEGMPNVVMEAMAMQKPVIATDVNGARELMGASAES
EEEECCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHCCCHHH
LRCDTGLIIPPKEPQAIAEAIEKLIDNPEAAEACGKAGHERVKNNFTMQAMVNNLEEHLR
CCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
NKIAEKRSTGQETKTDPAS
HHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNVLFINSIGKDKFGGGEKWMVNAAKGLTERGHNVVMASRKNSRLLKYAAEKGVQTKVMT
CCEEEEECCCCCCCCCCCCEEEEHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEEEEE
IRGDISPLATLKIASWMKQHETDVLICNLNKDVRVAGLAARLVGRPVVLARHGMLLCSRK
EECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEHHCCHHHHCCH
WKHKLTLTRLTDGIITNSQTIRKAYAEYGWFSENFVKVIYNGLIIPEKVTAFDFASRFPG
HHHEEEHHHHHCCHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
KKIIYSAGRLSKQKGFEYLIEAAAILKRKRNDLVFAISGEGKLESELSNQIRTLGLEDSF
CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCE
VLLGFTPDIYPCLKGCDLFVLASLFEGMPNVVMEAMAMQKPVIATDVNGARELMGASAES
EEEECCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHCCCHHH
LRCDTGLIIPPKEPQAIAEAIEKLIDNPEAAEACGKAGHERVKNNFTMQAMVNNLEEHLR
CCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
NKIAEKRSTGQETKTDPAS
HHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]