| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is glmM [H]
Identifier: 193213394
GI number: 193213394
Start: 1925268
End: 1926650
Strand: Direct
Name: glmM [H]
Synonym: Cpar_1755
Alternate gene names: 193213394
Gene position: 1925268-1926650 (Clockwise)
Preceding gene: 193213391
Following gene: 193213395
Centisome position: 84.1
GC content: 54.23
Gene sequence:
>1383_bases ATGCAAGTCAAATTCGGAACCGACGGTTGGCGGGCAATTATAGCCAAAGAATACACTTACGACAATCTCAAACTGGCGGC CCTCGCTTCCGGCGCCTACTTCCTCTCGCACCCAGACAAGTCAAATGGCGTTTGCGTCGGGTACGATACCCGCTTCATGT CGAAAGAGTTTGCACAATACACTGCCGAAGTGCTCTCGTCGATGGGCCTGAAGGTCTTTCTGGCCGACAGCTTCGTTTCA ACTCCAGCCGTGTCGCTCTACACGAGGGACAAGCGACTTGCCGGCGGCGTCATGATCACCGCATCGCACAACCCGCCACA ATACAACGGCTTCAAGATCAAGGCATCGTTCGGCGGTCCGGCCAATCCGGAGGTTATCGACCAGATCGAACAGAACCTGC TCACGGTTGACCCGCAGGCGGATGTAACCCCTGCACCGAATCTGATCGCCATGACTGACATCAAGTCGTACTACGTCAGC TATCTCAAATCGAAACTCGACCTGAAAATCATCCGGAACTCAGGCCTTAAAATCGCCCATAACGGCATGTTTGGCGCCGG TCAGGATATGATCACCCGGCTGCTCGACGAGTCGATGGTCAACTGTTACCACTGTTCGATCAACCCCGGCTTCAACGGCA TCAATCCCGAGCCGATTCCGAAGTACATCGGTGACTTCGTGGAGTTTTTCAAGGAGGTCGAAACCGACGTAGCCATCGTC AATGACGGCGATGCCGACCGCGTGGGCATGCTCGATGAGAAGGGCGAATTCGTCGATTCTCACAAACTATTCGCCATCAT CCTGAAATATCTGGTCGAGCAAAAGGGCCAGCGCGGTGAGGTGGCCAAAACCTTCGCCCTGACCGATGTTATCGACAAAC TCTGCCAGAAGCACGACCTGAAGATGCACCTGCTGCCGGTCGGCTTCAAGCATGTCAGCCGCCTCATGACCACCAACGAC ATCCTTATCGGCGGCGAAGAGTCGGGCGGCATTGGCATCACCTCCTTCCTGCCCGAGCGCGACGGCGTATACATCGGCCT ATTGATTCTCGAAATCATGGCGCTCCGCCAGAAAACACTCACCGGCCTGGTCGAAGAGCTGTATGATGAATTCGGATTTT TCAGCTACAACCGTCTGGACCTGCATGTGGCTGAAGAGAAGAAAAACGCCATCATCTCCGCAGCAACTGGAGGCAAACTG AAAAGCATCGCTGGATACGCGGTAACGGGCTTCAATGATCTGGACGGCTACAAATACCATTTCGAAGGCGGATGGCTGCT GATCAGACCGTCGGGCACCGAACCGATCCTCAGAATCTATTGTGAAGCCGACTCCACCGAAAAAGTGGAAAAAGTGCTCG CGTTCGCATCAAAACTCTCTTAA
Upstream 100 bases:
>100_bases GCGTATTTTACAAAACAAGTTACCTCACCGGCAGAGGAGTGGTGAATGCACGTGACGAAGCGCCGGCCAGTCAAAACAAT TATATCAAATCCATAACAGA
Downstream 100 bases:
>100_bases AAGGCGCAAGAGCAGCGAGAGTTTAACGTCATATAAAAACGTCAGGTTTGTTTCGTACATTTGACAACACGCTGAGGCAT CCGATGATTTTACGGATGCT
Product: Phosphomannomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MQVKFGTDGWRAIIAKEYTYDNLKLAALASGAYFLSHPDKSNGVCVGYDTRFMSKEFAQYTAEVLSSMGLKVFLADSFVS TPAVSLYTRDKRLAGGVMITASHNPPQYNGFKIKASFGGPANPEVIDQIEQNLLTVDPQADVTPAPNLIAMTDIKSYYVS YLKSKLDLKIIRNSGLKIAHNGMFGAGQDMITRLLDESMVNCYHCSINPGFNGINPEPIPKYIGDFVEFFKEVETDVAIV NDGDADRVGMLDEKGEFVDSHKLFAIILKYLVEQKGQRGEVAKTFALTDVIDKLCQKHDLKMHLLPVGFKHVSRLMTTND ILIGGEESGGIGITSFLPERDGVYIGLLILEIMALRQKTLTGLVEELYDEFGFFSYNRLDLHVAEEKKNAIISAATGGKL KSIAGYAVTGFNDLDGYKYHFEGGWLLIRPSGTEPILRIYCEADSTEKVEKVLAFASKLS
Sequences:
>Translated_460_residues MQVKFGTDGWRAIIAKEYTYDNLKLAALASGAYFLSHPDKSNGVCVGYDTRFMSKEFAQYTAEVLSSMGLKVFLADSFVS TPAVSLYTRDKRLAGGVMITASHNPPQYNGFKIKASFGGPANPEVIDQIEQNLLTVDPQADVTPAPNLIAMTDIKSYYVS YLKSKLDLKIIRNSGLKIAHNGMFGAGQDMITRLLDESMVNCYHCSINPGFNGINPEPIPKYIGDFVEFFKEVETDVAIV NDGDADRVGMLDEKGEFVDSHKLFAIILKYLVEQKGQRGEVAKTFALTDVIDKLCQKHDLKMHLLPVGFKHVSRLMTTND ILIGGEESGGIGITSFLPERDGVYIGLLILEIMALRQKTLTGLVEELYDEFGFFSYNRLDLHVAEEKKNAIISAATGGKL KSIAGYAVTGFNDLDGYKYHFEGGWLLIRPSGTEPILRIYCEADSTEKVEKVLAFASKLS >Mature_460_residues MQVKFGTDGWRAIIAKEYTYDNLKLAALASGAYFLSHPDKSNGVCVGYDTRFMSKEFAQYTAEVLSSMGLKVFLADSFVS TPAVSLYTRDKRLAGGVMITASHNPPQYNGFKIKASFGGPANPEVIDQIEQNLLTVDPQADVTPAPNLIAMTDIKSYYVS YLKSKLDLKIIRNSGLKIAHNGMFGAGQDMITRLLDESMVNCYHCSINPGFNGINPEPIPKYIGDFVEFFKEVETDVAIV NDGDADRVGMLDEKGEFVDSHKLFAIILKYLVEQKGQRGEVAKTFALTDVIDKLCQKHDLKMHLLPVGFKHVSRLMTTND ILIGGEESGGIGITSFLPERDGVYIGLLILEIMALRQKTLTGLVEELYDEFGFFSYNRLDLHVAEEKKNAIISAATGGKL KSIAGYAVTGFNDLDGYKYHFEGGWLLIRPSGTEPILRIYCEADSTEKVEKVLAFASKLS
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI21361621, Length=384, Percent_Identity=28.90625, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI290463102, Length=388, Percent_Identity=27.5773195876289, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI133922562, Length=376, Percent_Identity=26.5957446808511, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI290463104, Length=219, Percent_Identity=26.9406392694064, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI63055049, Length=436, Percent_Identity=21.7889908256881, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI31377548, Length=423, Percent_Identity=25.531914893617, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1786904, Length=498, Percent_Identity=27.9116465863454, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI1789566, Length=463, Percent_Identity=25.7019438444924, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1788361, Length=430, Percent_Identity=22.7906976744186, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17535441, Length=424, Percent_Identity=26.8867924528302, Blast_Score=117, Evalue=9e-27, Organism=Caenorhabditis elegans, GI71993870, Length=374, Percent_Identity=24.0641711229947, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71993878, Length=234, Percent_Identity=28.6324786324786, Blast_Score=75, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6323752, Length=408, Percent_Identity=27.2058823529412, Blast_Score=114, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6322722, Length=415, Percent_Identity=26.0240963855422, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6323934, Length=285, Percent_Identity=28.0701754385965, Blast_Score=73, Evalue=9e-14, Organism=Drosophila melanogaster, GI17864244, Length=525, Percent_Identity=25.7142857142857, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI24651977, Length=425, Percent_Identity=23.2941176470588, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI20129809, Length=425, Percent_Identity=23.2941176470588, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 50808; Mature: 50808
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVKFGTDGWRAIIAKEYTYDNLKLAALASGAYFLSHPDKSNGVCVGYDTRFMSKEFAQY CEEEECCCCCEEEEEEECCCCCEEEEEEECCEEEEECCCCCCCEEEEECHHHHHHHHHHH TAEVLSSMGLKVFLADSFVSTPAVSLYTRDKRLAGGVMITASHNPPQYNGFKIKASFGGP HHHHHHHCCEEEEEECCHHCCCEEEEEECCCEEECCEEEEECCCCCCCCCEEEEEECCCC ANPEVIDQIEQNLLTVDPQADVTPAPNLIAMTDIKSYYVSYLKSKLDLKIIRNSGLKIAH CCHHHHHHHHHCEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCEEEEECCCCEEEE NGMFGAGQDMITRLLDESMVNCYHCSINPGFNGINPEPIPKYIGDFVEFFKEVETDVAIV CCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE NDGDADRVGMLDEKGEFVDSHKLFAIILKYLVEQKGQRGEVAKTFALTDVIDKLCQKHDL ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC KMHLLPVGFKHVSRLMTTNDILIGGEESGGIGITSFLPERDGVYIGLLILEIMALRQKTL EEEEEECCHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHH TGLVEELYDEFGFFSYNRLDLHVAEEKKNAIISAATGGKLKSIAGYAVTGFNDLDGYKYH HHHHHHHHHHHCCCEECEEEEEEECCCCCEEEEECCCCCCHHCCCEEEECCCCCCCEEEE FEGGWLLIRPSGTEPILRIYCEADSTEKVEKVLAFASKLS EECCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MQVKFGTDGWRAIIAKEYTYDNLKLAALASGAYFLSHPDKSNGVCVGYDTRFMSKEFAQY CEEEECCCCCEEEEEEECCCCCEEEEEEECCEEEEECCCCCCCEEEEECHHHHHHHHHHH TAEVLSSMGLKVFLADSFVSTPAVSLYTRDKRLAGGVMITASHNPPQYNGFKIKASFGGP HHHHHHHCCEEEEEECCHHCCCEEEEEECCCEEECCEEEEECCCCCCCCCEEEEEECCCC ANPEVIDQIEQNLLTVDPQADVTPAPNLIAMTDIKSYYVSYLKSKLDLKIIRNSGLKIAH CCHHHHHHHHHCEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCEEEEECCCCEEEE NGMFGAGQDMITRLLDESMVNCYHCSINPGFNGINPEPIPKYIGDFVEFFKEVETDVAIV CCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE NDGDADRVGMLDEKGEFVDSHKLFAIILKYLVEQKGQRGEVAKTFALTDVIDKLCQKHDL ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC KMHLLPVGFKHVSRLMTTNDILIGGEESGGIGITSFLPERDGVYIGLLILEIMALRQKTL EEEEEECCHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHH TGLVEELYDEFGFFSYNRLDLHVAEEKKNAIISAATGGKLKSIAGYAVTGFNDLDGYKYH HHHHHHHHHHHCCCEECEEEEEEECCCCCEEEEECCCCCCHHCCCEEEECCCCCCCEEEE FEGGWLLIRPSGTEPILRIYCEADSTEKVEKVLAFASKLS EECCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA