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The map label for this gene is arnC [H]

Identifier: 193213358

GI number: 193213358

Start: 1880833

End: 1881819

Strand: Direct

Name: arnC [H]

Synonym: Cpar_1719

Alternate gene names: 193213358

Gene position: 1880833-1881819 (Clockwise)

Preceding gene: 193213357

Following gene: 193213359

Centisome position: 82.16

GC content: 58.05

Gene sequence:

>987_bases
ATGACGAGCCTCTCCGTCATCGTGCCGCTCTATAACGAGCGGGAGTCGCTCCCCGAGCTGTGCGCCCAACTGTTCGCAGC
GCTGAACAGTCCCGATCTGGCGCGATGCTTCGATGCGCCGTTCAGCTTCGAGGTAATCATGGTCGATGACGGTTCAACCG
ATGGTTCCGACAAGGTGATCGGGGAGTTGATGACTGGCAGGCCAGAGCTAAAATTGATCTCGTTCCGCCGGAATTATGGT
AAAACCGAAGCGCTTTCAGCAGGGCTGCGCGTGGCATCAGGCGAGGTGGTGGTAACGATGGACGCCGATTTGCAGGACGA
TCCACAGGAGATCGCGGCGCTCGTCATGAAACTGAATGAAGGCTTCGATCTGGTGAGCGGCTGGAAGCGCGAGCGCAACG
ACCCGCTGAGCAAAACGATGCCATCGAAGCTTTTCAACCTGACGACGCGCATCTTCAGCGGCATTCAACTGCACGACTTC
AATTGCGGCCTGAAAGCCTTCAACCGGGAACTGGCCGATTCGCTCGACCTGCACGGCGAGATGCACCGCTACATTCCGGT
GCTCGCCAAGTGGAAAGGCTTCCGCGTCACTGAAATTCCGGTCAGGCACCACGCCCGCAAATTCGGCACCAGCAAGTTCG
GCGTGTCGCGGTTCCTACCCGGCCTGTTCGATTTCCTCTCGGTGATGTTCATCACGCGCTACCTGAGACGCCCCATGCAC
TTCTTCGGCATGATGGGACTCGGCAGCTTCCTCGCTGGCCTGAGCATCGGCCTGTATGTCACCATCGAAAAGTACTTTTT
CAACCAACCGGCAGGCAACCGGCCGATTCTCTTTCTTGGCATACTGCTCATCATCCTCGGTGTGCAGTTCTTCTCGACCG
GTCTGCTCGGCGAGATGCTCTCAAGCCGGCAGTCGCAGCACGGCGGCTGGTCGATCCGCAAAACCGCAAACCTGCCTGAC
ACCATCATCGACAAACTGAACGAGTGA

Upstream 100 bases:

>100_bases
GCGCCTGCTGGCGGAGTGGATTCTGCGCGACCGGCTGCCGGTTCGGATGCAGCTTCAGCTGCACAAGTACATCTGGAACC
CCGAAACGCGGGGGGTGTAG

Downstream 100 bases:

>100_bases
ACTTCCGGCAGCAGATCGCCGTTACGGTATGCTCGATTCACGAAAACATCCAAACCAGACGATAGTATGAAACGGGTCGG
CGCCCATGTCAGTATTGCCG

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTSLSVIVPLYNERESLPELCAQLFAALNSPDLARCFDAPFSFEVIMVDDGSTDGSDKVIGELMTGRPELKLISFRRNYG
KTEALSAGLRVASGEVVVTMDADLQDDPQEIAALVMKLNEGFDLVSGWKRERNDPLSKTMPSKLFNLTTRIFSGIQLHDF
NCGLKAFNRELADSLDLHGEMHRYIPVLAKWKGFRVTEIPVRHHARKFGTSKFGVSRFLPGLFDFLSVMFITRYLRRPMH
FFGMMGLGSFLAGLSIGLYVTIEKYFFNQPAGNRPILFLGILLIILGVQFFSTGLLGEMLSSRQSQHGGWSIRKTANLPD
TIIDKLNE

Sequences:

>Translated_328_residues
MTSLSVIVPLYNERESLPELCAQLFAALNSPDLARCFDAPFSFEVIMVDDGSTDGSDKVIGELMTGRPELKLISFRRNYG
KTEALSAGLRVASGEVVVTMDADLQDDPQEIAALVMKLNEGFDLVSGWKRERNDPLSKTMPSKLFNLTTRIFSGIQLHDF
NCGLKAFNRELADSLDLHGEMHRYIPVLAKWKGFRVTEIPVRHHARKFGTSKFGVSRFLPGLFDFLSVMFITRYLRRPMH
FFGMMGLGSFLAGLSIGLYVTIEKYFFNQPAGNRPILFLGILLIILGVQFFSTGLLGEMLSSRQSQHGGWSIRKTANLPD
TIIDKLNE
>Mature_327_residues
TSLSVIVPLYNERESLPELCAQLFAALNSPDLARCFDAPFSFEVIMVDDGSTDGSDKVIGELMTGRPELKLISFRRNYGK
TEALSAGLRVASGEVVVTMDADLQDDPQEIAALVMKLNEGFDLVSGWKRERNDPLSKTMPSKLFNLTTRIFSGIQLHDFN
CGLKAFNRELADSLDLHGEMHRYIPVLAKWKGFRVTEIPVRHHARKFGTSKFGVSRFLPGLFDFLSVMFITRYLRRPMHF
FGMMGLGSFLAGLSIGLYVTIEKYFFNQPAGNRPILFLGILLIILGVQFFSTGLLGEMLSSRQSQHGGWSIRKTANLPDT
IIDKLNE

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=239, Percent_Identity=27.6150627615063, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI1788588, Length=299, Percent_Identity=32.1070234113712, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1788692, Length=302, Percent_Identity=24.5033112582781, Blast_Score=101, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI71999402, Length=223, Percent_Identity=27.8026905829596, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25146207, Length=189, Percent_Identity=28.042328042328, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6325441, Length=116, Percent_Identity=34.4827586206897, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585265, Length=228, Percent_Identity=24.5614035087719, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36770; Mature: 36639

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: PS00267 TACHYKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLSVIVPLYNERESLPELCAQLFAALNSPDLARCFDAPFSFEVIMVDDGSTDGSDKVI
CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCCCCHHHHH
GELMTGRPELKLISFRRNYGKTEALSAGLRVASGEVVVTMDADLQDDPQEIAALVMKLNE
HHHHCCCCCEEEEEEHHCCCCHHHHHHCCEEECCCEEEEECCCCCCCHHHHHHHHHHHCC
GFDLVSGWKRERNDPLSKTMPSKLFNLTTRIFSGIQLHDFNCGLKAFNRELADSLDLHGE
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCHH
MHRYIPVLAKWKGFRVTEIPVRHHARKFGTSKFGVSRFLPGLFDFLSVMFITRYLRRPMH
HHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGMMGLGSFLAGLSIGLYVTIEKYFFNQPAGNRPILFLGILLIILGVQFFSTGLLGEML
HHHHHHHHHHHHHHHHHHEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SSRQSQHGGWSIRKTANLPDTIIDKLNE
HHHHCCCCCEEEEECCCCCHHHHHHCCC
>Mature Secondary Structure 
TSLSVIVPLYNERESLPELCAQLFAALNSPDLARCFDAPFSFEVIMVDDGSTDGSDKVI
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCCCCHHHHH
GELMTGRPELKLISFRRNYGKTEALSAGLRVASGEVVVTMDADLQDDPQEIAALVMKLNE
HHHHCCCCCEEEEEEHHCCCCHHHHHHCCEEECCCEEEEECCCCCCCHHHHHHHHHHHCC
GFDLVSGWKRERNDPLSKTMPSKLFNLTTRIFSGIQLHDFNCGLKAFNRELADSLDLHGE
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCHH
MHRYIPVLAKWKGFRVTEIPVRHHARKFGTSKFGVSRFLPGLFDFLSVMFITRYLRRPMH
HHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGMMGLGSFLAGLSIGLYVTIEKYFFNQPAGNRPILFLGILLIILGVQFFSTGLLGEML
HHHHHHHHHHHHHHHHHHEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SSRQSQHGGWSIRKTANLPDTIIDKLNE
HHHHCCCCCEEEEECCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA