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The map label for this gene is yrbE [C]

Identifier: 193213347

GI number: 193213347

Start: 1868905

End: 1869702

Strand: Direct

Name: yrbE [C]

Synonym: Cpar_1708

Alternate gene names: 193213347

Gene position: 1868905-1869702 (Clockwise)

Preceding gene: 193213346

Following gene: 193213348

Centisome position: 81.64

GC content: 60.53

Gene sequence:

>798_bases
ATGCCCCTGACGCTCATCGGTAACTTCGTGGATAGCAAAGTGCTCCAGCTCAAGGAGCTGCTGCTGACCATGCAGGAATT
TTTCTATTTCGCGCTCAGAGCCTTTTCCACCCTGCCAAAAGCCAAACGCTACTGGCGGGATGTGCTTGATCAGGCGCTCA
TCTGCGGGGTCGAGTCGATTCCGATCGTGCTCGTCAGCTCGATCTCCATCGGCGCGCTGATGTCAATGGAAGTGGGCAAC
CTGCTCGAAGAGTTCGGCGCCAAGACGATGCTCGGGCGCTCCACCTCGAACGCCGTACTTCGCGAACTCGGCCCGCTCTT
GATGGGCCTGATGCTTTCGGCGCGCTACGGATCGCGTAACGGCGCGGAACTCGGCGCGATGCAGATTTCCGAGCAGATCG
ACGCCCTGCGCGCCTTCGGCACCGACCCCATCGCCAAGCTCGTCATGCCGAGGCTGCTGGCCGCGCTCATCATGTTCGTG
CCGCTCATCGCCCTCTCCGACTTCGCCGGATTGCAGACCGCCGCTCTCGTCGCTCAGTTCTACCACAAGCTCGACCCCGG
CATCTTCTGGAACTCGATCTACCCGAGGCTGCTGCCGAAGGACTTCGTCGTCAGCTTCCTCAAAGCTCCGGTGTTCGCGA
TTATCATCACGCTGGTCAGCAGCTTCAACGGCTTCTCGGCACACGGCGGTACGGCTGGCGTTGGCCGATCAACCATCAAG
GGTATCGTCGCCTCGTCGGGCCTGGTGCTCGTGGCCAACTTCTACGTCTCGAAAATCGTGCTCGACATCATGCACTGA

Upstream 100 bases:

>100_bases
GCCCGTTGATGAAGAAACCTGCAAGTTTGCTATACTTGCACCACATACAGAGCGCCGGAAGTCGAATGGGCGCGATTTAT
GATGAATTGATTTTGATACT

Downstream 100 bases:

>100_bases
TATGATTGAACTCCGGAACGTCACGCTGAAGTACGGCGAAAAGGTAATTCTCGACAAGGTTTCGCTGACCGTGCAGGACA
ACACCATCAAGGCGATACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPLTLIGNFVDSKVLQLKELLLTMQEFFYFALRAFSTLPKAKRYWRDVLDQALICGVESIPIVLVSSISIGALMSMEVGN
LLEEFGAKTMLGRSTSNAVLRELGPLLMGLMLSARYGSRNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMFV
PLIALSDFAGLQTAALVAQFYHKLDPGIFWNSIYPRLLPKDFVVSFLKAPVFAIIITLVSSFNGFSAHGGTAGVGRSTIK
GIVASSGLVLVANFYVSKIVLDIMH

Sequences:

>Translated_265_residues
MPLTLIGNFVDSKVLQLKELLLTMQEFFYFALRAFSTLPKAKRYWRDVLDQALICGVESIPIVLVSSISIGALMSMEVGN
LLEEFGAKTMLGRSTSNAVLRELGPLLMGLMLSARYGSRNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMFV
PLIALSDFAGLQTAALVAQFYHKLDPGIFWNSIYPRLLPKDFVVSFLKAPVFAIIITLVSSFNGFSAHGGTAGVGRSTIK
GIVASSGLVLVANFYVSKIVLDIMH
>Mature_264_residues
PLTLIGNFVDSKVLQLKELLLTMQEFFYFALRAFSTLPKAKRYWRDVLDQALICGVESIPIVLVSSISIGALMSMEVGNL
LEEFGAKTMLGRSTSNAVLRELGPLLMGLMLSARYGSRNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMFVP
LIALSDFAGLQTAALVAQFYHKLDPGIFWNSIYPRLLPKDFVVSFLKAPVFAIIITLVSSFNGFSAHGGTAGVGRSTIKG
IVASSGLVLVANFYVSKIVLDIMH

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=245, Percent_Identity=30.6122448979592, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 28764; Mature: 28632

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLTLIGNFVDSKVLQLKELLLTMQEFFYFALRAFSTLPKAKRYWRDVLDQALICGVESI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHH
PIVLVSSISIGALMSMEVGNLLEEFGAKTMLGRSTSNAVLRELGPLLMGLMLSARYGSRN
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
GAELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMFVPLIALSDFAGLQTAALVAQF
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YHKLDPGIFWNSIYPRLLPKDFVVSFLKAPVFAIIITLVSSFNGFSAHGGTAGVGRSTIK
HHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
GIVASSGLVLVANFYVSKIVLDIMH
HHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA