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The map label for this gene is trpH [H]

Identifier: 193213346

GI number: 193213346

Start: 1867927

End: 1868793

Strand: Direct

Name: trpH [H]

Synonym: Cpar_1707

Alternate gene names: 193213346

Gene position: 1867927-1868793 (Clockwise)

Preceding gene: 193213345

Following gene: 193213347

Centisome position: 81.6

GC content: 54.67

Gene sequence:

>867_bases
ATGCCATACAGCTCGTCAGGTGTAGGGCATAATGGCTTTGATAAAGCGGATTTACACATACACACCAAATGTTCGGACGG
CCTGTTCACACCCGAAGAGATCGTTCGTAAGGCGGTTCATGGCGGATTGAAAGCCATCAGCATCACCGACCATGATACCG
TTGCGGGTATAGACAAAGCAAAGCCATTAGCACTCGAATTGGGGCTTGAGCTGATCCCTGGCGTAGAGATGAGCTCGGCC
TACAAGGGGTATGACATCCATATCCTTGGGTATTTTTTTGACTATCAGCACTCAGAGCTGAAGCGTTATCTGGACAACTG
CCGCCGCCTGCGCACGGAGCGGGCGGAGCGCATGGTGCAGAAACTCGGCAAAATGGGCGTCAAGATCGAGATCGAACAGA
TCATCATGAAAGCCCAGAACGGCAGCGTGGGGCGTCCGCACATCGCGGCGGTGCTTCAGGACGGCGGGTTCGTCAAAAGT
TTCAGCGAAGCATTCAGCAAATACCTCGGCTCGCACAGCCCGGCCTACGTCAAAAGCATCGAAACGCATCCGCAGGAGGT
CATCCGGCTCATCAACGAAGCCGGCGGGTTGTCGTTCCTGGCCCATCCGGCCCAGAACGTGCCCGATGAAATTCTGCGCC
AGCTCATCTCCTTCGGGCTCGATGGGCTTGAAATCATTCACCCTTCGCACGACACCTACCGCCAGAACTACTACCGGGAG
ATTGCCAACGAGTACTTCATGCTCTTCTCGGGCGGCTCGGACTATCACGGCTTGAAAGATCACGAAGACAATTTCGGCCA
GATCTGGATACCGTACGAGTGGGTCACCAAAATGAAAAGCCGGCTGTATCCGGTGATGAAGGGTTGA

Upstream 100 bases:

>100_bases
AACTTTCTACCGCGAAAATTTATTCTATTCCTGTAAACAAGGCCGGAAATTTTGTTATATATGAGGATTAGAATAAAAAC
ATGAAAACCAAACTTTGGCC

Downstream 100 bases:

>100_bases
GATTTTTTTTGGCCCGTTGATGAAGAAACCTGCAAGTTTGCTATACTTGCACCACATACAGAGCGCCGGAAGTCGAATGG
GCGCGATTTATGATGAATTG

Product: PHP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MPYSSSGVGHNGFDKADLHIHTKCSDGLFTPEEIVRKAVHGGLKAISITDHDTVAGIDKAKPLALELGLELIPGVEMSSA
YKGYDIHILGYFFDYQHSELKRYLDNCRRLRTERAERMVQKLGKMGVKIEIEQIIMKAQNGSVGRPHIAAVLQDGGFVKS
FSEAFSKYLGSHSPAYVKSIETHPQEVIRLINEAGGLSFLAHPAQNVPDEILRQLISFGLDGLEIIHPSHDTYRQNYYRE
IANEYFMLFSGGSDYHGLKDHEDNFGQIWIPYEWVTKMKSRLYPVMKG

Sequences:

>Translated_288_residues
MPYSSSGVGHNGFDKADLHIHTKCSDGLFTPEEIVRKAVHGGLKAISITDHDTVAGIDKAKPLALELGLELIPGVEMSSA
YKGYDIHILGYFFDYQHSELKRYLDNCRRLRTERAERMVQKLGKMGVKIEIEQIIMKAQNGSVGRPHIAAVLQDGGFVKS
FSEAFSKYLGSHSPAYVKSIETHPQEVIRLINEAGGLSFLAHPAQNVPDEILRQLISFGLDGLEIIHPSHDTYRQNYYRE
IANEYFMLFSGGSDYHGLKDHEDNFGQIWIPYEWVTKMKSRLYPVMKG
>Mature_287_residues
PYSSSGVGHNGFDKADLHIHTKCSDGLFTPEEIVRKAVHGGLKAISITDHDTVAGIDKAKPLALELGLELIPGVEMSSAY
KGYDIHILGYFFDYQHSELKRYLDNCRRLRTERAERMVQKLGKMGVKIEIEQIIMKAQNGSVGRPHIAAVLQDGGFVKSF
SEAFSKYLGSHSPAYVKSIETHPQEVIRLINEAGGLSFLAHPAQNVPDEILRQLISFGLDGLEIIHPSHDTYRQNYYREI
ANEYFMLFSGGSDYHGLKDHEDNFGQIWIPYEWVTKMKSRLYPVMKG

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=262, Percent_Identity=31.2977099236641, Blast_Score=135, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 32471; Mature: 32340

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYSSSGVGHNGFDKADLHIHTKCSDGLFTPEEIVRKAVHGGLKAISITDHDTVAGIDKA
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHCCCCCC
KPLALELGLELIPGVEMSSAYKGYDIHILGYFFDYQHSELKRYLDNCRRLRTERAERMVQ
CCHHHHHCHHHCCCCCCCCCCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KLGKMGVKIEIEQIIMKAQNGSVGRPHIAAVLQDGGFVKSFSEAFSKYLGSHSPAYVKSI
HHHHCCCEEEHHHHHHHHCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHCCCCCHHHHHH
ETHPQEVIRLINEAGGLSFLAHPAQNVPDEILRQLISFGLDGLEIIHPSHDTYRQNYYRE
HCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH
IANEYFMLFSGGSDYHGLKDHEDNFGQIWIPYEWVTKMKSRLYPVMKG
HHHHEEEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PYSSSGVGHNGFDKADLHIHTKCSDGLFTPEEIVRKAVHGGLKAISITDHDTVAGIDKA
CCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHCCCCCC
KPLALELGLELIPGVEMSSAYKGYDIHILGYFFDYQHSELKRYLDNCRRLRTERAERMVQ
CCHHHHHCHHHCCCCCCCCCCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KLGKMGVKIEIEQIIMKAQNGSVGRPHIAAVLQDGGFVKSFSEAFSKYLGSHSPAYVKSI
HHHHCCCEEEHHHHHHHHCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHCCCCCHHHHHH
ETHPQEVIRLINEAGGLSFLAHPAQNVPDEILRQLISFGLDGLEIIHPSHDTYRQNYYRE
HCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH
IANEYFMLFSGGSDYHGLKDHEDNFGQIWIPYEWVTKMKSRLYPVMKG
HHHHEEEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]