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The map label for this gene is 193213294

Identifier: 193213294

GI number: 193213294

Start: 1805760

End: 1806449

Strand: Direct

Name: 193213294

Synonym: Cpar_1652

Alternate gene names: NA

Gene position: 1805760-1806449 (Clockwise)

Preceding gene: 193213293

Following gene: 193213295

Centisome position: 78.88

GC content: 54.93

Gene sequence:

>690_bases
ATGAACACCACGCAGAACAAGAACGCGTTTGATGATTCAACGCTGGCCGACGGCTGGCTTGAAATCGTCATGCTCCATAA
AAATAAAATCATCATCCTCGTCTCGGTCATTCTGCTTGCGGCGGGCGGAAGTTTCTACTGGTTACAGAAGAGCCGCGTCG
ATGAACAGCAGGCCTCGGCTGCACTGTCGAAGCTCATCCCTGCTATCGAAGTGGCAAGCGAAACCGGCGATACTGACAAC
GCGAAGCTGGTAAGCAACATGCAAACCATCATCAAGCGCTGGGGCTACACGCCGAGCGGCAACAAAACCAGGCTTTATCT
GGCAACGCTTTGGTACAACAATGGCAAGACCAGTGAAGCGCTTGCGCTCTACGAAAAGGTCAAGAGCGACAACAAGGATC
TCCAAGCCGCAGCAATCGCCGGAGCTGCCGCCTGCCACGTGCAGGACAAGCAATTCACCAAAGCCGCAACCGCATACGCA
AAAGCATCGGAAACGGCTGAAAACGAAGCCCTCAAGGCGATGTACCTCAACAAGGCCGCAGACAGTTACGTGCTTGACGA
GCAACCTGCCGAAGCGGTCAAACAGCTTGAAAAGGTCATCAAATCCTGGCCCGAAACCAGCTCGGCTGTGGTCGCCAACC
GCACTCTCTGGCGTCTTGAAGGCGCAGGCGTCCCGATTCCGCAACTCTGA

Upstream 100 bases:

>100_bases
GGCCGGATTTTGAAATTCATGGTAACTTACGTAGGTTGATCGACGCCAGCAGCCGGAAAACGGCTGGGCGACCTGCCAGA
AAACGAGATCACAGAACAAC

Downstream 100 bases:

>100_bases
ATTTTTCCGACACTCAAACAGCAGAACATGCCAGCACAATTCATTATCAAGACCAGCATGGGAGACATTGCGATCTCCCT
GTACGACGACACCCCGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MNTTQNKNAFDDSTLADGWLEIVMLHKNKIIILVSVILLAAGGSFYWLQKSRVDEQQASAALSKLIPAIEVASETGDTDN
AKLVSNMQTIIKRWGYTPSGNKTRLYLATLWYNNGKTSEALALYEKVKSDNKDLQAAAIAGAAACHVQDKQFTKAATAYA
KASETAENEALKAMYLNKAADSYVLDEQPAEAVKQLEKVIKSWPETSSAVVANRTLWRLEGAGVPIPQL

Sequences:

>Translated_229_residues
MNTTQNKNAFDDSTLADGWLEIVMLHKNKIIILVSVILLAAGGSFYWLQKSRVDEQQASAALSKLIPAIEVASETGDTDN
AKLVSNMQTIIKRWGYTPSGNKTRLYLATLWYNNGKTSEALALYEKVKSDNKDLQAAAIAGAAACHVQDKQFTKAATAYA
KASETAENEALKAMYLNKAADSYVLDEQPAEAVKQLEKVIKSWPETSSAVVANRTLWRLEGAGVPIPQL
>Mature_229_residues
MNTTQNKNAFDDSTLADGWLEIVMLHKNKIIILVSVILLAAGGSFYWLQKSRVDEQQASAALSKLIPAIEVASETGDTDN
AKLVSNMQTIIKRWGYTPSGNKTRLYLATLWYNNGKTSEALALYEKVKSDNKDLQAAAIAGAAACHVQDKQFTKAATAYA
KASETAENEALKAMYLNKAADSYVLDEQPAEAVKQLEKVIKSWPETSSAVVANRTLWRLEGAGVPIPQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24995; Mature: 24995

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTQNKNAFDDSTLADGWLEIVMLHKNKIIILVSVILLAAGGSFYWLQKSRVDEQQASA
CCCCCCCCCCCCCHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHH
ALSKLIPAIEVASETGDTDNAKLVSNMQTIIKRWGYTPSGNKTRLYLATLWYNNGKTSEA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHH
LALYEKVKSDNKDLQAAAIAGAAACHVQDKQFTKAATAYAKASETAENEALKAMYLNKAA
HHHHHHHHCCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DSYVLDEQPAEAVKQLEKVIKSWPETSSAVVANRTLWRLEGAGVPIPQL
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MNTTQNKNAFDDSTLADGWLEIVMLHKNKIIILVSVILLAAGGSFYWLQKSRVDEQQASA
CCCCCCCCCCCCCHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHH
ALSKLIPAIEVASETGDTDNAKLVSNMQTIIKRWGYTPSGNKTRLYLATLWYNNGKTSEA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHH
LALYEKVKSDNKDLQAAAIAGAAACHVQDKQFTKAATAYAKASETAENEALKAMYLNKAA
HHHHHHHHCCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DSYVLDEQPAEAVKQLEKVIKSWPETSSAVVANRTLWRLEGAGVPIPQL
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA