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The map label for this gene is glnBB [H]

Identifier: 193213264

GI number: 193213264

Start: 1771393

End: 1771770

Strand: Direct

Name: glnBB [H]

Synonym: Cpar_1621

Alternate gene names: 193213264

Gene position: 1771393-1771770 (Clockwise)

Preceding gene: 193213263

Following gene: 193213265

Centisome position: 77.38

GC content: 56.61

Gene sequence:

>378_bases
ATGAAAGAGATCATTTCAGTTATTCGCATCAACAAGGTGAACGAAACCAAGCAAGCGCTCATCGATGCCGGCATCTCCGC
CTTCACGGCGACCGGCCGGGTTATGGGACGCGGCAAAGGCCAGGTTCACTATGACATCCTCCAGGGCGCCGAAGCCGGCC
ATCCGGAGGCAATCGCTCAGCTCGGTAACGCACCGAGGCTTGTTGCCAAAAGAATCCTGACCGTGGTTGTGCCCGATGAG
CTTGCCCAGACGGCTATCGATACGATCATCAAGACCAACCAGACCGGCAAACCGGGAGACGGCAAGATTTTCGTCACGCC
GATTCTCGATACCATCAGGGTCAGAACCGGTGAAGAAGGCGACGTGGCTCTGAACTGA

Upstream 100 bases:

>100_bases
GTAAGTTCGGTGACGGTAAAATCTTCGTCTCTGCTGTCGAAGAGGTCTACACGATCAGCTCCGGCATCAAAGAAGGCGAG
CTTGAAGCGAAGGAGGCCTG

Downstream 100 bases:

>100_bases
AGCTGAACTGAGATAACTACTAAAGGTGTAAACGGAGAACGCTACAATGCCAGCGAAAGTAAACTTACCAGATCCGGCCT
CGATTACCGAGGAGCTGATC

Product: nitrogen regulatory protein P-II

Products: NA

Alternate protein names: ORF-122 [H]

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKEIISVIRINKVNETKQALIDAGISAFTATGRVMGRGKGQVHYDILQGAEAGHPEAIAQLGNAPRLVAKRILTVVVPDE
LAQTAIDTIIKTNQTGKPGDGKIFVTPILDTIRVRTGEEGDVALN

Sequences:

>Translated_125_residues
MKEIISVIRINKVNETKQALIDAGISAFTATGRVMGRGKGQVHYDILQGAEAGHPEAIAQLGNAPRLVAKRILTVVVPDE
LAQTAIDTIIKTNQTGKPGDGKIFVTPILDTIRVRTGEEGDVALN
>Mature_125_residues
MKEIISVIRINKVNETKQALIDAGISAFTATGRVMGRGKGQVHYDILQGAEAGHPEAIAQLGNAPRLVAKRILTVVVPDE
LAQTAIDTIIKTNQTGKPGDGKIFVTPILDTIRVRTGEEGDVALN

Specific function: Could be involved in the regulation of nitrogen fixation [H]

COG id: COG0347

COG function: function code E; Nitrogen regulatory protein PII

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P(II) protein family [H]

Homologues:

Organism=Escherichia coli, GI1788904, Length=124, Percent_Identity=39.5161290322581, Blast_Score=84, Evalue=4e-18,
Organism=Escherichia coli, GI1786655, Length=124, Percent_Identity=33.0645161290323, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002187
- InterPro:   IPR011322
- InterPro:   IPR015867
- InterPro:   IPR017918 [H]

Pfam domain/function: PF00543 P-II [H]

EC number: NA

Molecular weight: Translated: 13311; Mature: 13311

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS00638 PII_GLNB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIISVIRINKVNETKQALIDAGISAFTATGRVMGRGKGQVHYDILQGAEAGHPEAIAQ
CHHHHHHHHCCCCCHHHHHHHHHCHHHHHHCCCEEECCCCCEEHHHHCCCCCCCHHHHHH
LGNAPRLVAKRILTVVVPDELAQTAIDTIIKTNQTGKPGDGKIFVTPILDTIRVRTGEEG
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHEECCCCCC
DVALN
CEECC
>Mature Secondary Structure
MKEIISVIRINKVNETKQALIDAGISAFTATGRVMGRGKGQVHYDILQGAEAGHPEAIAQ
CHHHHHHHHCCCCCHHHHHHHHHCHHHHHHCCCEEECCCCCEEHHHHCCCCCCCHHHHHH
LGNAPRLVAKRILTVVVPDELAQTAIDTIIKTNQTGKPGDGKIFVTPILDTIRVRTGEEG
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHEECCCCCC
DVALN
CEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2068380 [H]