Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
---|---|
Accession | NC_011027 |
Length | 2,289,249 |
Click here to switch to the map view.
The map label for this gene is 193213154
Identifier: 193213154
GI number: 193213154
Start: 1653001
End: 1653252
Strand: Direct
Name: 193213154
Synonym: Cpar_1509
Alternate gene names: NA
Gene position: 1653001-1653252 (Clockwise)
Preceding gene: 193213153
Following gene: 193213155
Centisome position: 72.21
GC content: 56.35
Gene sequence:
>252_bases ATGCCCCCTCATCCTGAACTGGAATCGCCCGAAAAAAAACGCCTGTCGCTGGTCATTCCAACACTTGATGCCCTGCTCTC GCTGACGTTTCTGGTGCTCGCAGCGTATATTGCTTGGTATGCTTCGACCATGACTGGCAAGGATGGCCGCGACCTGCTCT GGTATTCGGCGCTTCTGGGAGCATACGGCGTCTGGCGCGCGATCCGGAGCGTGATTCGTCATCGCCAAAACCAGCAGAAC GAGAACAACTGA
Upstream 100 bases:
>100_bases ATGCAGTGGGCCTGGTCCTACTTCACGTTCGGCTACGGCGCGCGGCTGATCGTCAACAAGGATTGGCGCTTCTACCGGGA AAAGAAAGCGTGCAAAGACG
Downstream 100 bases:
>100_bases AGCACCGTTTTACAGATTTGTCATCTTTCAAGAATTAATGATAACCATGCACACTCCTGCAATAAATCTCGAAACCGAAC AGCAGCTTTTCTTCCACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MPPHPELESPEKKRLSLVIPTLDALLSLTFLVLAAYIAWYASTMTGKDGRDLLWYSALLGAYGVWRAIRSVIRHRQNQQN ENN
Sequences:
>Translated_83_residues MPPHPELESPEKKRLSLVIPTLDALLSLTFLVLAAYIAWYASTMTGKDGRDLLWYSALLGAYGVWRAIRSVIRHRQNQQN ENN >Mature_82_residues PPHPELESPEKKRLSLVIPTLDALLSLTFLVLAAYIAWYASTMTGKDGRDLLWYSALLGAYGVWRAIRSVIRHRQNQQNE NN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9467; Mature: 9336
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPHPELESPEKKRLSLVIPTLDALLSLTFLVLAAYIAWYASTMTGKDGRDLLWYSALLG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AYGVWRAIRSVIRHRQNQQNENN HHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PPHPELESPEKKRLSLVIPTLDALLSLTFLVLAAYIAWYASTMTGKDGRDLLWYSALLG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AYGVWRAIRSVIRHRQNQQNENN HHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA