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The map label for this gene is ydiF [H]

Identifier: 193213146

GI number: 193213146

Start: 1645302

End: 1647107

Strand: Direct

Name: ydiF [H]

Synonym: Cpar_1501

Alternate gene names: 193213146

Gene position: 1645302-1647107 (Clockwise)

Preceding gene: 193213142

Following gene: 193213147

Centisome position: 71.87

GC content: 57.53

Gene sequence:

>1806_bases
ATGCTCGAAGCACGAAATCTCTCTCTTTCGGCAGGCACCAAAGTGCTCCTGCGCGACACCTCATTCCGGATCGGCGACAA
GGATCGCGCCTCGCTGGTCGGCCTGAACGGCACCGGCAAGTCAACGCTCCTGCGCCTGTTGAGCGGCCAGCTCAAGGAGG
ACGGGCCCATCAGCGAAGGGCAGATCATGAAGTCTTCGACGACCACCATCGGCTATCTGCCGCAGGAGATTTCGTTCGAA
GGCGACCTCGACAAAACCGCGCTCCAGTACGCTCTCGAAGCTAACAAAACGCTGCATGAACTTTCTGAAAAGATTTCGCG
CATGGAGCACGAGCTCGCGCTGCCCGATCAGGATCACGCAAGCGAGGAGTACCACAAGCTGATCGAGCGTTTCAGCGACG
CCTCGCACGACTTCGAGCGGCTCGGCGGCTACCGGATGCAGTCCGACGCTGAGAAAATTCTTTCCGGCCTCGGCTTCAGC
GGGGCGGATTTCTATAAAAAGGTCAAGGAGTTCTCCGGCGGCTGGCAGATGCGCCTGCTCATCGCCCGGCTGCTGCTGCA
AAACCCGACGCTCCTCCTGCTAGACGAGCCGACCAACCACCTCGACATCGACTCGCTGCGTTGGCTTGAACAGTACCTGC
TCAACTACGAGCACAGCTACCTGATCGTCTCGCACGACCGCTTCTTCCTCGACAAGCTCACCACCAAGACACTCGAAATC
GCCTTCAACGAAATCACCGAGTACAAGGGCAACTACAGCTTTTATGAGAAAGAAAAGGCCGAGCGATACACACTCATGAT
GTCGCGCTACGAGAACGATCTGAAAAAGATGGCTGACCTGAAGTCCTTCGTCGATCGCTTCCGCTACAAGGCCACCAAGG
CGCGTCAGGCGCAAAGCCGGTTGCGCCAGATGCAGAAGCTCGAAGAGGAGCTGCAGGCCCCGGAGGAGGATCTGTCGCAG
ATTTCTTTCTCGTTCCCAAAGGCGAGACCGTCAGGCCGCGAAGTGCTCCGGCTGGAGGGCGTTTCCAAGTCATTCACCCT
GCCGGACGGCACGACCAAAGAGGTGCTGAAAGATATTGACCTCGAAATCATGCGCGGCGACCGCATCGCCATCGTCGGTT
CGAACGGCGCGGGCAAGACCACCTTTTGTCGGATTTTGGCTGACGAGATCGAGTTCAAAGGCACGCGCCAGCTTGGCCAC
CACGTCAGCATGAACTACTTCGCCCAGCACCAGACCGACAACCTCTCGCCGGAAAAGAGCATTTTGGACGAGATGATGGA
CGCTGCACCGACAGCCGAAGCACAGCGCCGTGTGCGCGACATCCTCGGCTGCTTCCTCTTCAGCGGCGACGCGGTGGAGA
AGAAAACCGCCGTGCTCTCCGGCGGCGAAAAATCGAGGGTTGCGCTGGCAAAAATCCTGCTTCAGGCCTCCAACCTGCTC
ATCATGGACGAGCCGACCAACCACCTCGACATGCGCTCCAAGGAGATGCTCATCGACTCGCTCGAAAACTACGACGGCAC
GCTCCTCATCGTCTCGCACGACCGCTACTTCCTCGACAGCCTGGTAAACAAGGTGTTCGAGATCAAAAACGGTGGAGTGC
AGGTCTATCTCGGCACCTACGCCGAATACCTCGAAAAAGCTGAAAAAGCGTGGGAAGAGGAGAAAAAGCAGCAGTCGGAA
GCTGAAGCGAAAAAAGCTGCTGAACAAAAAGCCGCGGCAAGCAAACCGGCAGCAAAAAAAACCTGCCGCGCCCAAAGCCA
ACAGCAAAAAGATCGCGGCAATCGAAAAGGAGATTCAACGGCTTGA

Upstream 100 bases:

>100_bases
TTTCAAGCGCCATGCAAGGCGATTCCGGACGGAAACGGACGGTAGCATGGAGCTTTAACGAAATATCGTATCTTCACCAC
AAACCTGAAACCGCGACTCC

Downstream 100 bases:

>100_bases
AGAGTCCAAACAGCAGCACGAAGAGATGATGGCCCAGCCCTCATTCTACGAGCAACCCACCGACGAAACCCGCAAGGCTA
CCGAGGAGTACGACGAAATC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MLEARNLSLSAGTKVLLRDTSFRIGDKDRASLVGLNGTGKSTLLRLLSGQLKEDGPISEGQIMKSSTTTIGYLPQEISFE
GDLDKTALQYALEANKTLHELSEKISRMEHELALPDQDHASEEYHKLIERFSDASHDFERLGGYRMQSDAEKILSGLGFS
GADFYKKVKEFSGGWQMRLLIARLLLQNPTLLLLDEPTNHLDIDSLRWLEQYLLNYEHSYLIVSHDRFFLDKLTTKTLEI
AFNEITEYKGNYSFYEKEKAERYTLMMSRYENDLKKMADLKSFVDRFRYKATKARQAQSRLRQMQKLEEELQAPEEDLSQ
ISFSFPKARPSGREVLRLEGVSKSFTLPDGTTKEVLKDIDLEIMRGDRIAIVGSNGAGKTTFCRILADEIEFKGTRQLGH
HVSMNYFAQHQTDNLSPEKSILDEMMDAAPTAEAQRRVRDILGCFLFSGDAVEKKTAVLSGGEKSRVALAKILLQASNLL
IMDEPTNHLDMRSKEMLIDSLENYDGTLLIVSHDRYFLDSLVNKVFEIKNGGVQVYLGTYAEYLEKAEKAWEEEKKQQSE
AEAKKAAEQKAAASKPAAKKTCRAQSQQQKDRGNRKGDSTA

Sequences:

>Translated_601_residues
MLEARNLSLSAGTKVLLRDTSFRIGDKDRASLVGLNGTGKSTLLRLLSGQLKEDGPISEGQIMKSSTTTIGYLPQEISFE
GDLDKTALQYALEANKTLHELSEKISRMEHELALPDQDHASEEYHKLIERFSDASHDFERLGGYRMQSDAEKILSGLGFS
GADFYKKVKEFSGGWQMRLLIARLLLQNPTLLLLDEPTNHLDIDSLRWLEQYLLNYEHSYLIVSHDRFFLDKLTTKTLEI
AFNEITEYKGNYSFYEKEKAERYTLMMSRYENDLKKMADLKSFVDRFRYKATKARQAQSRLRQMQKLEEELQAPEEDLSQ
ISFSFPKARPSGREVLRLEGVSKSFTLPDGTTKEVLKDIDLEIMRGDRIAIVGSNGAGKTTFCRILADEIEFKGTRQLGH
HVSMNYFAQHQTDNLSPEKSILDEMMDAAPTAEAQRRVRDILGCFLFSGDAVEKKTAVLSGGEKSRVALAKILLQASNLL
IMDEPTNHLDMRSKEMLIDSLENYDGTLLIVSHDRYFLDSLVNKVFEIKNGGVQVYLGTYAEYLEKAEKAWEEEKKQQSE
AEAKKAAEQKAAASKPAAKKTCRAQSQQQKDRGNRKGDSTA
>Mature_601_residues
MLEARNLSLSAGTKVLLRDTSFRIGDKDRASLVGLNGTGKSTLLRLLSGQLKEDGPISEGQIMKSSTTTIGYLPQEISFE
GDLDKTALQYALEANKTLHELSEKISRMEHELALPDQDHASEEYHKLIERFSDASHDFERLGGYRMQSDAEKILSGLGFS
GADFYKKVKEFSGGWQMRLLIARLLLQNPTLLLLDEPTNHLDIDSLRWLEQYLLNYEHSYLIVSHDRFFLDKLTTKTLEI
AFNEITEYKGNYSFYEKEKAERYTLMMSRYENDLKKMADLKSFVDRFRYKATKARQAQSRLRQMQKLEEELQAPEEDLSQ
ISFSFPKARPSGREVLRLEGVSKSFTLPDGTTKEVLKDIDLEIMRGDRIAIVGSNGAGKTTFCRILADEIEFKGTRQLGH
HVSMNYFAQHQTDNLSPEKSILDEMMDAAPTAEAQRRVRDILGCFLFSGDAVEKKTAVLSGGEKSRVALAKILLQASNLL
IMDEPTNHLDMRSKEMLIDSLENYDGTLLIVSHDRYFLDSLVNKVFEIKNGGVQVYLGTYAEYLEKAEKAWEEEKKQQSE
AEAKKAAEQKAAASKPAAKKTCRAQSQQQKDRGNRKGDSTA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=545, Percent_Identity=33.2110091743119, Blast_Score=272, Evalue=6e-73,
Organism=Homo sapiens, GI10947137, Length=574, Percent_Identity=30.8362369337979, Blast_Score=253, Evalue=5e-67,
Organism=Homo sapiens, GI27881506, Length=555, Percent_Identity=31.5315315315315, Blast_Score=252, Evalue=8e-67,
Organism=Homo sapiens, GI69354671, Length=553, Percent_Identity=29.6564195298373, Blast_Score=203, Evalue=5e-52,
Organism=Homo sapiens, GI10947135, Length=553, Percent_Identity=29.6564195298373, Blast_Score=202, Evalue=5e-52,
Organism=Escherichia coli, GI1789751, Length=593, Percent_Identity=34.7386172006745, Blast_Score=344, Evalue=8e-96,
Organism=Escherichia coli, GI1787041, Length=547, Percent_Identity=34.3692870201097, Blast_Score=311, Evalue=8e-86,
Organism=Escherichia coli, GI1787182, Length=540, Percent_Identity=30.3703703703704, Blast_Score=242, Evalue=6e-65,
Organism=Escherichia coli, GI2367384, Length=543, Percent_Identity=30.7550644567219, Blast_Score=228, Evalue=6e-61,
Organism=Escherichia coli, GI1788506, Length=606, Percent_Identity=21.6171617161716, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788225, Length=209, Percent_Identity=29.6650717703349, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI87081791, Length=245, Percent_Identity=26.530612244898, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788165, Length=212, Percent_Identity=29.7169811320755, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI145693107, Length=409, Percent_Identity=22.2493887530562, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787758, Length=206, Percent_Identity=25.2427184466019, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787105, Length=223, Percent_Identity=30.0448430493274, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1787370, Length=217, Percent_Identity=25.8064516129032, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI48995001, Length=272, Percent_Identity=26.8382352941176, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786398, Length=228, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787164, Length=192, Percent_Identity=33.8541666666667, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787112, Length=257, Percent_Identity=28.7937743190661, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI87082267, Length=237, Percent_Identity=26.1603375527426, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=547, Percent_Identity=34.3692870201097, Blast_Score=269, Evalue=4e-72,
Organism=Caenorhabditis elegans, GI17555318, Length=552, Percent_Identity=31.8840579710145, Blast_Score=245, Evalue=6e-65,
Organism=Caenorhabditis elegans, GI17559834, Length=565, Percent_Identity=28.6725663716814, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI193202349, Length=225, Percent_Identity=26.2222222222222, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17543740, Length=254, Percent_Identity=26.3779527559055, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17533971, Length=237, Percent_Identity=25.7383966244726, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=534, Percent_Identity=34.4569288389513, Blast_Score=276, Evalue=6e-75,
Organism=Saccharomyces cerevisiae, GI6320874, Length=547, Percent_Identity=31.4442413162706, Blast_Score=246, Evalue=9e-66,
Organism=Saccharomyces cerevisiae, GI6325030, Length=420, Percent_Identity=27.3809523809524, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6323278, Length=407, Percent_Identity=25.7985257985258, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6324314, Length=305, Percent_Identity=27.8688524590164, Blast_Score=107, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24666836, Length=546, Percent_Identity=34.0659340659341, Blast_Score=295, Evalue=4e-80,
Organism=Drosophila melanogaster, GI24642252, Length=559, Percent_Identity=30.5903398926655, Blast_Score=269, Evalue=4e-72,
Organism=Drosophila melanogaster, GI18859989, Length=559, Percent_Identity=30.5903398926655, Blast_Score=269, Evalue=4e-72,
Organism=Drosophila melanogaster, GI24641342, Length=555, Percent_Identity=30.8108108108108, Blast_Score=258, Evalue=8e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 68134; Mature: 68134

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEARNLSLSAGTKVLLRDTSFRIGDKDRASLVGLNGTGKSTLLRLLSGQLKEDGPISEG
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCC
QIMKSSTTTIGYLPQEISFEGDLDKTALQYALEANKTLHELSEKISRMEHELALPDQDHA
CEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SEEYHKLIERFSDASHDFERLGGYRMQSDAEKILSGLGFSGADFYKKVKEFSGGWQMRLL
HHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHH
IARLLLQNPTLLLLDEPTNHLDIDSLRWLEQYLLNYEHSYLIVSHDRFFLDKLTTKTLEI
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
AFNEITEYKGNYSFYEKEKAERYTLMMSRYENDLKKMADLKSFVDRFRYKATKARQAQSR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQMQKLEEELQAPEEDLSQISFSFPKARPSGREVLRLEGVSKSFTLPDGTTKEVLKDID
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCC
LEIMRGDRIAIVGSNGAGKTTFCRILADEIEFKGTRQLGHHVSMNYFAQHQTDNLSPEKS
CEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHCCCCCCCHHHH
ILDEMMDAAPTAEAQRRVRDILGCFLFSGDAVEKKTAVLSGGEKSRVALAKILLQASNLL
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEE
IMDEPTNHLDMRSKEMLIDSLENYDGTLLIVSHDRYFLDSLVNKVFEIKNGGVQVYLGTY
EECCCCCCHHCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEHHHH
AEYLEKAEKAWEEEKKQQSEAEAKKAAEQKAAASKPAAKKTCRAQSQQQKDRGNRKGDST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
A
C
>Mature Secondary Structure
MLEARNLSLSAGTKVLLRDTSFRIGDKDRASLVGLNGTGKSTLLRLLSGQLKEDGPISEG
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCC
QIMKSSTTTIGYLPQEISFEGDLDKTALQYALEANKTLHELSEKISRMEHELALPDQDHA
CEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SEEYHKLIERFSDASHDFERLGGYRMQSDAEKILSGLGFSGADFYKKVKEFSGGWQMRLL
HHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHH
IARLLLQNPTLLLLDEPTNHLDIDSLRWLEQYLLNYEHSYLIVSHDRFFLDKLTTKTLEI
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
AFNEITEYKGNYSFYEKEKAERYTLMMSRYENDLKKMADLKSFVDRFRYKATKARQAQSR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQMQKLEEELQAPEEDLSQISFSFPKARPSGREVLRLEGVSKSFTLPDGTTKEVLKDID
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCC
LEIMRGDRIAIVGSNGAGKTTFCRILADEIEFKGTRQLGHHVSMNYFAQHQTDNLSPEKS
CEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHCCCCCCCHHHH
ILDEMMDAAPTAEAQRRVRDILGCFLFSGDAVEKKTAVLSGGEKSRVALAKILLQASNLL
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEE
IMDEPTNHLDMRSKEMLIDSLENYDGTLLIVSHDRYFLDSLVNKVFEIKNGGVQVYLGTY
EECCCCCCHHCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEHHHH
AEYLEKAEKAWEEEKKQQSEAEAKKAAEQKAAASKPAAKKTCRAQSQQQKDRGNRKGDST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]