Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is 193213067
Identifier: 193213067
GI number: 193213067
Start: 1552198
End: 1552893
Strand: Direct
Name: 193213067
Synonym: Cpar_1420
Alternate gene names: NA
Gene position: 1552198-1552893 (Clockwise)
Preceding gene: 193213066
Following gene: 193213068
Centisome position: 67.8
GC content: 57.33
Gene sequence:
>696_bases ATGACATTCTGCTACTCCTGCGGCGCTCTGTCAACATCACGGGAGCACGTTCCACCCAAGTGTCTCTTCCCCGAGGCGAA GGACTCGCTTGATGGCATAGATCGACGCATCAACCTTATCACGGTTCCTGCATGCACCGAGCACAATTTGACAAAGTCGG GTGACGACGAGTACTTCCTGTACGTGCTGAGCACCAGCATCACCTCAAATGAGATTGCGCTGGCTCAGGTGCAGACAAAG CTGGGGCGCGCAATTGCGCGTCGGCCGGCTCTCACGACATCACTTCTTGAAGGCAGCAAGGATTGCTGGGTGCGGGATAG CGCAACCGGAGCTGTTCATGAGGCTACGCAGTTCGCCCTTGACGGCGAACGTTTCTCCAAGAGCCTCGAGCTGGTCGCCA AGGGAATCTACTTTCATCACTTCGGTGAACGATGGGAAGGGAAGTTGCATGTGCGTGCGGACTTCATCGATTTCCCCCAT GAGCCCAATGCCGCCGACATTCAGGAGGCTCGCATGGCGCTCGCAAGCTATGCCGATGAGCTGTTCAAGGTCGAGCCAAA GCACGGCTCGAACCCTGACGTGTTCTGGTATCAGGTACACACGCCCTGCGAAGGGCCTCGGTGTCTGCTTCGTATGGGGT TCTTTGGCGGGAGCAGAGCCATCGCCTTCTTTGGGGAGCTTCGCACACGTGGCTAA
Upstream 100 bases:
>100_bases TTGAATGAAGGGTAATTGCGGGCATCTTATGCGGACACGAATCAAGAGTCCGCGTTCTTATGCAGATAAACCTAATTAAT GTTAGCGAGTTGAGGTCAGC
Downstream 100 bases:
>100_bases CTCCTCGCTCAGCAGACCGGGCGCCCGTCGCGTCAGATGACTCGTGCTGTAACCCGTGACGGTCGACTGCTGAGCGCCCG GGGCGTTATGATTCACAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTFCYSCGALSTSREHVPPKCLFPEAKDSLDGIDRRINLITVPACTEHNLTKSGDDEYFLYVLSTSITSNEIALAQVQTK LGRAIARRPALTTSLLEGSKDCWVRDSATGAVHEATQFALDGERFSKSLELVAKGIYFHHFGERWEGKLHVRADFIDFPH EPNAADIQEARMALASYADELFKVEPKHGSNPDVFWYQVHTPCEGPRCLLRMGFFGGSRAIAFFGELRTRG
Sequences:
>Translated_231_residues MTFCYSCGALSTSREHVPPKCLFPEAKDSLDGIDRRINLITVPACTEHNLTKSGDDEYFLYVLSTSITSNEIALAQVQTK LGRAIARRPALTTSLLEGSKDCWVRDSATGAVHEATQFALDGERFSKSLELVAKGIYFHHFGERWEGKLHVRADFIDFPH EPNAADIQEARMALASYADELFKVEPKHGSNPDVFWYQVHTPCEGPRCLLRMGFFGGSRAIAFFGELRTRG >Mature_230_residues TFCYSCGALSTSREHVPPKCLFPEAKDSLDGIDRRINLITVPACTEHNLTKSGDDEYFLYVLSTSITSNEIALAQVQTKL GRAIARRPALTTSLLEGSKDCWVRDSATGAVHEATQFALDGERFSKSLELVAKGIYFHHFGERWEGKLHVRADFIDFPHE PNAADIQEARMALASYADELFKVEPKHGSNPDVFWYQVHTPCEGPRCLLRMGFFGGSRAIAFFGELRTRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25805; Mature: 25674
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFCYSCGALSTSREHVPPKCLFPEAKDSLDGIDRRINLITVPACTEHNLTKSGDDEYFL CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCEEE YVLSTSITSNEIALAQVQTKLGRAIARRPALTTSLLEGSKDCWVRDSATGAVHEATQFAL EEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEECCCCCHHHHHHHHHC DGERFSKSLELVAKGIYFHHFGERWEGKLHVRADFIDFPHEPNAADIQEARMALASYADE CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH LFKVEPKHGSNPDVFWYQVHTPCEGPRCLLRMGFFGGSRAIAFFGELRTRG HEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEHHHCCC >Mature Secondary Structure TFCYSCGALSTSREHVPPKCLFPEAKDSLDGIDRRINLITVPACTEHNLTKSGDDEYFL EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCEEE YVLSTSITSNEIALAQVQTKLGRAIARRPALTTSLLEGSKDCWVRDSATGAVHEATQFAL EEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEECCCCCHHHHHHHHHC DGERFSKSLELVAKGIYFHHFGERWEGKLHVRADFIDFPHEPNAADIQEARMALASYADE CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH LFKVEPKHGSNPDVFWYQVHTPCEGPRCLLRMGFFGGSRAIAFFGELRTRG HEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA