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The map label for this gene is 193213068

Identifier: 193213068

GI number: 193213068

Start: 1552991

End: 1553659

Strand: Direct

Name: 193213068

Synonym: Cpar_1421

Alternate gene names: NA

Gene position: 1552991-1553659 (Clockwise)

Preceding gene: 193213067

Following gene: 193213071

Centisome position: 67.84

GC content: 47.23

Gene sequence:

>669_bases
ATGAACTACGATTCCCAAAAACATCATCGCCGCTCGATTCGGTTGGCCGAATATGACTATTCAAAAGGCGGAGCATATTT
CGTAACAATTTGCACTCGAAACGGCGACCAGATATTGTCAAACCAGCCAAAACCGCAACAACCTGATGTAAATGTAGGGG
TAGCCCTTGCGGCTACCCATCCTCTCAACACACCTCCCAACCCCGAACCCGACTCTGCACTCCGATTCGAACTGACATCA
ATCGGCGAAATCGTGGATCGCAATTGGCGAACGTTGCCTGAACGCTTTCCAATGATTTCGCTGGATGAATACGTTATCAT
GCCGAATCATTTGCATGGCATTGTGTTCATAAACGAGTCGGATAAACCGGAGTTTCGTGATGGCAGAAAAAGGGTAGGCG
CAAGGCCTACCCCTACAGCTCCAATATCTCCACCAACCCCGACGTTGGGCATGATTGTTGGTGCGTTCAAGTCGAAATCA
GTAAAGGATGTTCTTGCTCACATTGACGAGAACGGTTTGGATATGATCGGCAAAATCTGGCAGCGGAACTACTTTGAGCG
GGTCATCAGAAATGAACGGGACTTAGAAAATATCAGAACGTATATCAAAAACAATCCCACCAATTGGGCGCAAGACGAAG
AAAACCCCATGCACAGTGAACGTAAATAA

Upstream 100 bases:

>100_bases
TAACTCCTCGCTCAGCAGACCGGGCGCCCGTCGCGTCAGATGACTCGTGCTGTAACCCGTGACGGTCGACTGCTGAGCGC
CCGGGGCGTTATGATTCACA

Downstream 100 bases:

>100_bases
AAAAGGGTGACCACAATGTGTCACCCTTTTTTCCTTGATCCTCTCCCCCACTTCTCACCGCAACAACAACAGCGGAATCC
GGCTCGAACCAATCATCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MNYDSQKHHRRSIRLAEYDYSKGGAYFVTICTRNGDQILSNQPKPQQPDVNVGVALAATHPLNTPPNPEPDSALRFELTS
IGEIVDRNWRTLPERFPMISLDEYVIMPNHLHGIVFINESDKPEFRDGRKRVGARPTPTAPISPPTPTLGMIVGAFKSKS
VKDVLAHIDENGLDMIGKIWQRNYFERVIRNERDLENIRTYIKNNPTNWAQDEENPMHSERK

Sequences:

>Translated_222_residues
MNYDSQKHHRRSIRLAEYDYSKGGAYFVTICTRNGDQILSNQPKPQQPDVNVGVALAATHPLNTPPNPEPDSALRFELTS
IGEIVDRNWRTLPERFPMISLDEYVIMPNHLHGIVFINESDKPEFRDGRKRVGARPTPTAPISPPTPTLGMIVGAFKSKS
VKDVLAHIDENGLDMIGKIWQRNYFERVIRNERDLENIRTYIKNNPTNWAQDEENPMHSERK
>Mature_222_residues
MNYDSQKHHRRSIRLAEYDYSKGGAYFVTICTRNGDQILSNQPKPQQPDVNVGVALAATHPLNTPPNPEPDSALRFELTS
IGEIVDRNWRTLPERFPMISLDEYVIMPNHLHGIVFINESDKPEFRDGRKRVGARPTPTAPISPPTPTLGMIVGAFKSKS
VKDVLAHIDENGLDMIGKIWQRNYFERVIRNERDLENIRTYIKNNPTNWAQDEENPMHSERK

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25457; Mature: 25457

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYDSQKHHRRSIRLAEYDYSKGGAYFVTICTRNGDQILSNQPKPQQPDVNVGVALAATH
CCCCCCHHHHHHEEEEECCCCCCCEEEEEEEECCCCHHHCCCCCCCCCCCCEEEEEEECC
PLNTPPNPEPDSALRFELTSIGEIVDRNWRTLPERFPMISLDEYVIMPNHLHGIVFINES
CCCCCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHCCEECCCCEEECCCCCEEEEEEECC
DKPEFRDGRKRVGARPTPTAPISPPTPTLGMIVGAFKSKSVKDVLAHIDENGLDMIGKIW
CCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHH
QRNYFERVIRNERDLENIRTYIKNNPTNWAQDEENPMHSERK
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNYDSQKHHRRSIRLAEYDYSKGGAYFVTICTRNGDQILSNQPKPQQPDVNVGVALAATH
CCCCCCHHHHHHEEEEECCCCCCCEEEEEEEECCCCHHHCCCCCCCCCCCCEEEEEEECC
PLNTPPNPEPDSALRFELTSIGEIVDRNWRTLPERFPMISLDEYVIMPNHLHGIVFINES
CCCCCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHCCEECCCCEEECCCCCEEEEEEECC
DKPEFRDGRKRVGARPTPTAPISPPTPTLGMIVGAFKSKSVKDVLAHIDENGLDMIGKIW
CCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHH
QRNYFERVIRNERDLENIRTYIKNNPTNWAQDEENPMHSERK
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]