BacMap

Definition	Chlorobaculum parvum NCIB 8327 chromosome, complete genome.
Accession	NC_011027
Length	2,289,249

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The map label for this gene is hflB [C]

Identifier: 193213065

GI number: 193213065

Start: 1549723

End: 1551270

Strand: Direct

Name: hflB [C]

Synonym: Cpar_1418

Alternate gene names: 193213065

Gene position: 1549723-1551270 (Clockwise)

Preceding gene: 193213064

Following gene: 193213066

Centisome position: 67.7

GC content: 64.79

Gene sequence:

>1548_bases
ATGTCCTGGCTCGACGAACTGAAACTGAACATTGCGGCACGCGTAGCCGTCATCCATCTGGTAACCATCGATGAAGAGGA
CGCGCTCAAGGCGCTCACCGGGTGGTCGAACGCATCCGACTGGCCAAGCGGCATGGGCCTCATCACCTGGGACATCGGCG
ACCAGTTCCTGCAGGTGCGCGAACCGGCGGCGACCTTCAGCAAGATGGGCGCGACGCCCGAAACCGTGCTCGACATCATC
GACGAGTACAAAGGCTCTGCGACCTTTATCCTCAAGGATTTTAACCACTTCTGGGAGCACAACCGCAAGGTGTCGCGCAT
GTTGCGCAACCTCGCTTCGCGCCTGCCGTTTCGCGACGAAGCGGTGAACATCATCGTCACCAGTCCGGGCCGGAACCTGC
CCGAAGAGCTGTGCCACGACATCCCGACCATCGACGTCGGCAAGCCCGGCAGCGAGCAGATTCTGGAGCTTCTCGAACGC
GAAACCCGCTCCACGCGCTCGCTCGACAACGCGACGCACGGCCTGCGTGAGCGGCTCGTCGAGGGCGCGCTCGGCCTGTC
GATGGTCGAGGCGGCGCGGGCGTTCCGCAAGGCGATTGTGCTTGCGGGCGGCCAGCCGCTCGACGAGCGGAGCGTGCGGC
AGGTGCTGAACGAAAAGCGCCACATTATCCGCGAAAGCGGCGCGCTCGAACTCTACCCCTACACCGGCTCGATGAGCAAC
GTCGGCGGCCTTCGCGCGCTGAAGCAGTGGCTCGACCAGCGGCAGGAGGCGTTCAGCCAGGAAGCGCGCGAGTACGGCCT
CAGCACCCCGAAAGGCGTCGCGCTCATCGGCATTCCCGGCACCGGCAAAAGCCTCTGCGCGAAGGTCACCGCCGGGCACT
GGGGCATGACGCTGCTCCGCATGGACGTGGGCGCGATCTTCAGCGGGCTGTTGGGATCGAGCGAGCAGAACATCCGCGAA
GCAATCCGCATTGCCGAGGTGATCGCGCCGTGCGTACTCTGGGTTGACGAGATCGAAAAAGCGTTCGCCGGATCGGTCGG
CGACAGCGGTACGGCAAGCCGCGTCTTCGCAACGTTCCTGACCTGGATGCAGGAAAAAACCGCACCGGTCTTCGTCTTCG
CCACGGCCAACAACGTCGAGCGCCTGCCGCCCGAGCTGCTGCGCAAGGGGCGATTCGACGAGGTCTTTTTCCTCGACCTG
CCGACCCACGCCGAGCGCGTCAACATCCTCGAAGTACACCTCAAGGAGCGCGGCTACACCATGCTCTCGCACCGCTTCGA
CCTCAACGCCGTCGCCGACGCCACCGAGGGTTTCGTTGGCGCGGAACTGCAAGCGCTGGTCAACGATGCCATGTTTCCCG
CCTTCCGCGACAAGCGCCGCGAGATCGAGACCGAGGACTTGCTCGACGCCGCCCGCGCAATGGTGCCGCTCTCGGCCTCG
CACCAGCCGGTGATCGACGGCCTGCGCGAGATGGTCAAAAACGGCCAGGCCCGCAACGCCTCCGCCGAACTAGGCGCGGC
GGCTTCACAACAATCGGAGCTACGATGA

Upstream 100 bases:

>100_bases
TTCGCCCGCCCCGACAGTTGTTGGGTCGAAATCAGAATGACAGCGCATTTTTTCGGATTTTTTGGCAACACAGAGTCACA
GAAGTAAAACCAACATCAGC

Downstream 100 bases:

>100_bases
ATTTGAACGACACCCTTTCCGAACTCAGAAGCCGCGCGATACGCCCGTCCGATGATGCGCTGCCGCCGGTCATCGTCAAC
GAGCGGGATGGCTCCCCTAT

Product: AAA ATPase central domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MSWLDELKLNIAARVAVIHLVTIDEEDALKALTGWSNASDWPSGMGLITWDIGDQFLQVREPAATFSKMGATPETVLDII
DEYKGSATFILKDFNHFWEHNRKVSRMLRNLASRLPFRDEAVNIIVTSPGRNLPEELCHDIPTIDVGKPGSEQILELLER
ETRSTRSLDNATHGLRERLVEGALGLSMVEAARAFRKAIVLAGGQPLDERSVRQVLNEKRHIIRESGALELYPYTGSMSN
VGGLRALKQWLDQRQEAFSQEAREYGLSTPKGVALIGIPGTGKSLCAKVTAGHWGMTLLRMDVGAIFSGLLGSSEQNIRE
AIRIAEVIAPCVLWVDEIEKAFAGSVGDSGTASRVFATFLTWMQEKTAPVFVFATANNVERLPPELLRKGRFDEVFFLDL
PTHAERVNILEVHLKERGYTMLSHRFDLNAVADATEGFVGAELQALVNDAMFPAFRDKRREIETEDLLDAARAMVPLSAS
HQPVIDGLREMVKNGQARNASAELGAAASQQSELR

Sequences:

>Translated_515_residues
MSWLDELKLNIAARVAVIHLVTIDEEDALKALTGWSNASDWPSGMGLITWDIGDQFLQVREPAATFSKMGATPETVLDII
DEYKGSATFILKDFNHFWEHNRKVSRMLRNLASRLPFRDEAVNIIVTSPGRNLPEELCHDIPTIDVGKPGSEQILELLER
ETRSTRSLDNATHGLRERLVEGALGLSMVEAARAFRKAIVLAGGQPLDERSVRQVLNEKRHIIRESGALELYPYTGSMSN
VGGLRALKQWLDQRQEAFSQEAREYGLSTPKGVALIGIPGTGKSLCAKVTAGHWGMTLLRMDVGAIFSGLLGSSEQNIRE
AIRIAEVIAPCVLWVDEIEKAFAGSVGDSGTASRVFATFLTWMQEKTAPVFVFATANNVERLPPELLRKGRFDEVFFLDL
PTHAERVNILEVHLKERGYTMLSHRFDLNAVADATEGFVGAELQALVNDAMFPAFRDKRREIETEDLLDAARAMVPLSAS
HQPVIDGLREMVKNGQARNASAELGAAASQQSELR
>Mature_514_residues
SWLDELKLNIAARVAVIHLVTIDEEDALKALTGWSNASDWPSGMGLITWDIGDQFLQVREPAATFSKMGATPETVLDIID
EYKGSATFILKDFNHFWEHNRKVSRMLRNLASRLPFRDEAVNIIVTSPGRNLPEELCHDIPTIDVGKPGSEQILELLERE
TRSTRSLDNATHGLRERLVEGALGLSMVEAARAFRKAIVLAGGQPLDERSVRQVLNEKRHIIRESGALELYPYTGSMSNV
GGLRALKQWLDQRQEAFSQEAREYGLSTPKGVALIGIPGTGKSLCAKVTAGHWGMTLLRMDVGAIFSGLLGSSEQNIREA
IRIAEVIAPCVLWVDEIEKAFAGSVGDSGTASRVFATFLTWMQEKTAPVFVFATANNVERLPPELLRKGRFDEVFFLDLP
THAERVNILEVHLKERGYTMLSHRFDLNAVADATEGFVGAELQALVNDAMFPAFRDKRREIETEDLLDAARAMVPLSASH
QPVIDGLREMVKNGQARNASAELGAAASQQSELR

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI6005942, Length=218, Percent_Identity=34.4036697247706, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI45643123, Length=216, Percent_Identity=34.7222222222222, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI45643125, Length=216, Percent_Identity=34.7222222222222, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI157671927, Length=365, Percent_Identity=27.1232876712329, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI24430151, Length=240, Percent_Identity=28.3333333333333, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI195539395, Length=256, Percent_Identity=29.6875, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI24497435, Length=208, Percent_Identity=30.2884615384615, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI4505725, Length=223, Percent_Identity=30.9417040358744, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI300192933, Length=204, Percent_Identity=30.8823529411765, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI21361144, Length=248, Percent_Identity=27.0161290322581, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4507173, Length=208, Percent_Identity=32.6923076923077, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI229577436, Length=223, Percent_Identity=31.8385650224215, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI194018488, Length=231, Percent_Identity=31.1688311688312, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI89064750, Length=247, Percent_Identity=25.5060728744939, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI5729991, Length=247, Percent_Identity=25.5060728744939, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI24430155, Length=247, Percent_Identity=25.5060728744939, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI4506209, Length=249, Percent_Identity=26.5060240963855, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI153792536, Length=207, Percent_Identity=28.9855072463768, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI7657689, Length=243, Percent_Identity=28.8065843621399, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI21327685, Length=243, Percent_Identity=28.8065843621399, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI14149767, Length=252, Percent_Identity=27.3809523809524, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI62177112, Length=252, Percent_Identity=27.3809523809524, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI24497618, Length=209, Percent_Identity=28.2296650717703, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI5901990, Length=206, Percent_Identity=29.6116504854369, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI7019569, Length=198, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI31377644, Length=226, Percent_Identity=26.5486725663717, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI310125280, Length=236, Percent_Identity=27.9661016949153, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI310125282, Length=231, Percent_Identity=28.1385281385281, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI17865802, Length=198, Percent_Identity=28.7878787878788, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI156564401, Length=231, Percent_Identity=28.1385281385281, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI31742536, Length=224, Percent_Identity=24.5535714285714, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI112789543, Length=224, Percent_Identity=24.5535714285714, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI11875211, Length=202, Percent_Identity=26.7326732673267, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI40806170, Length=202, Percent_Identity=26.7326732673267, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1789568, Length=234, Percent_Identity=30.3418803418803, Blast_Score=99, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17532375, Length=237, Percent_Identity=35.0210970464135, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17508053, Length=255, Percent_Identity=30.9803921568627, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17563250, Length=240, Percent_Identity=28.75, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71987364, Length=257, Percent_Identity=30.3501945525292, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71987372, Length=257, Percent_Identity=30.3501945525292, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17537217, Length=192, Percent_Identity=32.2916666666667, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17531535, Length=238, Percent_Identity=31.0924369747899, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17554786, Length=208, Percent_Identity=30.7692307692308, Blast_Score=101, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI25144278, Length=208, Percent_Identity=29.8076923076923, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17554264, Length=210, Percent_Identity=31.9047619047619, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI25144281, Length=208, Percent_Identity=29.8076923076923, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI193209502, Length=231, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI25153574, Length=232, Percent_Identity=28.448275862069, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17508701, Length=245, Percent_Identity=25.7142857142857, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71994521, Length=229, Percent_Identity=28.82096069869, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17563248, Length=249, Percent_Identity=28.5140562248996, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17505546, Length=248, Percent_Identity=26.6129032258064, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17554784, Length=249, Percent_Identity=26.5060240963855, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI25146157, Length=247, Percent_Identity=26.7206477732794, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI133931034, Length=206, Percent_Identity=30.0970873786408, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193206114, Length=206, Percent_Identity=30.0970873786408, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193206116, Length=205, Percent_Identity=29.2682926829268, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115534323, Length=214, Percent_Identity=28.0373831775701, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560432, Length=205, Percent_Identity=28.2926829268293, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562804, Length=236, Percent_Identity=28.8135593220339, Blast_Score=72, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17508421, Length=200, Percent_Identity=32.5, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI32563584, Length=200, Percent_Identity=32.5, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI86561515, Length=191, Percent_Identity=27.7486910994764, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6320077, Length=227, Percent_Identity=36.5638766519824, Blast_Score=124, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6324833, Length=216, Percent_Identity=32.4074074074074, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6322651, Length=192, Percent_Identity=32.2916666666667, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6320197, Length=245, Percent_Identity=28.5714285714286, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6322994, Length=193, Percent_Identity=33.160621761658, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6321390, Length=208, Percent_Identity=29.8076923076923, Blast_Score=97, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6324691, Length=250, Percent_Identity=27.2, Blast_Score=97, Evalue=8e-21,
Organism=Saccharomyces cerevisiae, GI6323429, Length=224, Percent_Identity=32.5892857142857, Blast_Score=97, Evalue=8e-21,
Organism=Saccharomyces cerevisiae, GI6325281, Length=189, Percent_Identity=33.8624338624339, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6324000, Length=214, Percent_Identity=30.3738317757009, Blast_Score=90, Evalue=7e-19,
Organism=Saccharomyces cerevisiae, GI6322704, Length=220, Percent_Identity=28.1818181818182, Blast_Score=87, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6320602, Length=244, Percent_Identity=28.2786885245902, Blast_Score=87, Evalue=9e-18,
Organism=Saccharomyces cerevisiae, GI6321465, Length=205, Percent_Identity=28.2926829268293, Blast_Score=84, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6321709, Length=291, Percent_Identity=25.4295532646048, Blast_Score=81, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6323736, Length=211, Percent_Identity=30.8056872037915, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6325183, Length=313, Percent_Identity=24.9201277955272, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320854, Length=234, Percent_Identity=29.4871794871795, Blast_Score=77, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6325431, Length=230, Percent_Identity=26.5217391304348, Blast_Score=77, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6319554, Length=202, Percent_Identity=30.6930693069307, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17137560, Length=250, Percent_Identity=32, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI161076486, Length=250, Percent_Identity=32, Blast_Score=113, Evalue=4e-25,
Organism=Drosophila melanogaster, GI161076488, Length=250, Percent_Identity=32, Blast_Score=113, Evalue=4e-25,
Organism=Drosophila melanogaster, GI281365776, Length=198, Percent_Identity=32.8282828282828, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24660075, Length=198, Percent_Identity=32.8282828282828, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI45552965, Length=198, Percent_Identity=32.8282828282828, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24652279, Length=215, Percent_Identity=33.4883720930233, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24649446, Length=240, Percent_Identity=28.3333333333333, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI19920408, Length=217, Percent_Identity=30.4147465437788, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24663015, Length=219, Percent_Identity=31.9634703196347, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24640100, Length=217, Percent_Identity=30.4147465437788, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24639391, Length=251, Percent_Identity=29.4820717131474, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI17738151, Length=249, Percent_Identity=27.710843373494, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24656825, Length=252, Percent_Identity=29.7619047619048, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI19921202, Length=342, Percent_Identity=26.3157894736842, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24656820, Length=252, Percent_Identity=29.7619047619048, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24651451, Length=207, Percent_Identity=28.9855072463768, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI28574878, Length=211, Percent_Identity=29.8578199052133, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24665814, Length=211, Percent_Identity=29.8578199052133, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI281363136, Length=238, Percent_Identity=30.672268907563, Blast_Score=96, Evalue=8e-20,
Organism=Drosophila melanogaster, GI78707192, Length=238, Percent_Identity=30.672268907563, Blast_Score=96, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24658770, Length=232, Percent_Identity=30.6034482758621, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281361487, Length=241, Percent_Identity=26.9709543568465, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI18860063, Length=241, Percent_Identity=26.9709543568465, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI17137738, Length=249, Percent_Identity=26.9076305220884, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI20129529, Length=197, Percent_Identity=31.4720812182741, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI20129423, Length=186, Percent_Identity=29.0322580645161, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21355121, Length=225, Percent_Identity=29.3333333333333, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24644145, Length=225, Percent_Identity=28, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI281360142, Length=201, Percent_Identity=29.3532338308458, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI21357333, Length=201, Percent_Identity=29.3532338308458, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI281360146, Length=201, Percent_Identity=29.3532338308458, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281360138, Length=201, Percent_Identity=29.3532338308458, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281360136, Length=201, Percent_Identity=29.3532338308458, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24644411, Length=201, Percent_Identity=29.3532338308458, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281360144, Length=201, Percent_Identity=29.3532338308458, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281360140, Length=201, Percent_Identity=29.3532338308458, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI18859657, Length=223, Percent_Identity=26.457399103139, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28573010, Length=259, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571849, Length=199, Percent_Identity=27.6381909547739, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28571847, Length=199, Percent_Identity=27.6381909547739, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24581396, Length=210, Percent_Identity=25.7142857142857, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17864540, Length=202, Percent_Identity=29.7029702970297, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR001984
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 56954; Mature: 56822

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLDELKLNIAARVAVIHLVTIDEEDALKALTGWSNASDWPSGMGLITWDIGDQFLQVR
CCCHHHHHHHHHHHEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHH
EPAATFSKMGATPETVLDIIDEYKGSATFILKDFNHFWEHNRKVSRMLRNLASRLPFRDE
CHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
AVNIIVTSPGRNLPEELCHDIPTIDVGKPGSEQILELLERETRSTRSLDNATHGLRERLV
CEEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGALGLSMVEAARAFRKAIVLAGGQPLDERSVRQVLNEKRHIIRESGALELYPYTGSMSN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
VGGLRALKQWLDQRQEAFSQEAREYGLSTPKGVALIGIPGTGKSLCAKVTAGHWGMTLLR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHH
MDVGAIFSGLLGSSEQNIREAIRIAEVIAPCVLWVDEIEKAFAGSVGDSGTASRVFATFL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
TWMQEKTAPVFVFATANNVERLPPELLRKGRFDEVFFLDLPTHAERVNILEVHLKERGYT
HHHHHCCCCEEEEEECCCCHHCCHHHHHCCCCCCEEEEECCCCCHHHHHHEEEEHHCCCC
MLSHRFDLNAVADATEGFVGAELQALVNDAMFPAFRDKRREIETEDLLDAARAMVPLSAS
HHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
HQPVIDGLREMVKNGQARNASAELGAAASQQSELR
CCHHHHHHHHHHHCCCCCCCCHHHCCHHCHHHCCC
>Mature Secondary Structure 
SWLDELKLNIAARVAVIHLVTIDEEDALKALTGWSNASDWPSGMGLITWDIGDQFLQVR
CCHHHHHHHHHHHEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHH
EPAATFSKMGATPETVLDIIDEYKGSATFILKDFNHFWEHNRKVSRMLRNLASRLPFRDE
CHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
AVNIIVTSPGRNLPEELCHDIPTIDVGKPGSEQILELLERETRSTRSLDNATHGLRERLV
CEEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGALGLSMVEAARAFRKAIVLAGGQPLDERSVRQVLNEKRHIIRESGALELYPYTGSMSN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
VGGLRALKQWLDQRQEAFSQEAREYGLSTPKGVALIGIPGTGKSLCAKVTAGHWGMTLLR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHH
MDVGAIFSGLLGSSEQNIREAIRIAEVIAPCVLWVDEIEKAFAGSVGDSGTASRVFATFL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
TWMQEKTAPVFVFATANNVERLPPELLRKGRFDEVFFLDLPTHAERVNILEVHLKERGYT
HHHHHCCCCEEEEEECCCCHHCCHHHHHCCCCCCEEEEECCCCCHHHHHHEEEEHHCCCC
MLSHRFDLNAVADATEGFVGAELQALVNDAMFPAFRDKRREIETEDLLDAARAMVPLSAS
HHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
HQPVIDGLREMVKNGQARNASAELGAAASQQSELR
CCHHHHHHHHHHHCCCCCCCCHHHCCHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]