Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
---|---|
Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is yfeJ [H]
Identifier: 193213029
GI number: 193213029
Start: 1506265
End: 1506984
Strand: Direct
Name: yfeJ [H]
Synonym: Cpar_1381
Alternate gene names: 193213029
Gene position: 1506265-1506984 (Clockwise)
Preceding gene: 193213026
Following gene: 193213030
Centisome position: 65.8
GC content: 60.69
Gene sequence:
>720_bases ATGAACAACAAACTGCTCATCGTCCAGAACATCAGCCATGAAGGCCCCGGAATCCTTGCCGATTTGCTGAAAGAGCATGG AATCGACTTCAAGCTCTGCGATCTTTCGAAGGGCGAAACCGCACCCGATCCGGCGGGCTTTGCTGGCATGGTGGTACTCG GCGGGCCGCAGAGCGCCAATGACGCGACACCGCAGATCATCAGCGAACTGGCGCTGATCAAGAAGGCGCTTGACTCTGGC GTACCGTACCTCGGCATCTGCCTCGGCTTGCAGCTCCTTGTGAAAGCTCGCGGCGGCAACGTGGTGAAGTGCCCCCGGCA GGAGATCGGGTTCCGCGAACCTGACGGCGAACCGTTCATGGTGGAGCTAACGGACGACGACAAGCGCGACGCGCTTTTCC ATGGGATGCCGGAGCGGTTGCGGGTGTTTCAGCTTCACGGTGAAACGGTAGAGTTGGCGGACGGTATGACGCTGCTCGCC ACGGGGCGCGGCTGCACGAATCAGGTGGTGCGGGTCGGAAGCAACGCATGGGGGCTGCAATGCCACTTCGAGATGACGCC CGAGATGTTCGAGAGCTGGATCGGCATCGACGCCGACCTGAAGGCGATGAATCGCAATGAGCTGCTCGCGGAGTTCGATG CCATCAGCGAGGAATACGCCGAAACCGGGCGTTCGATCCTGCTGAACTTCCTCGCCGTAACCGGCCTCGTCAAAGCGTGA
Upstream 100 bases:
>100_bases ATCTCCCTCTTGCATCCGCTGGATTTGCCGGAAAGAACCTGCCGTACTACATTGATTTTCAAGTCGCTGCATCATCTACC CATCACCCCAAGGATGACCT
Downstream 100 bases:
>100_bases AAGTGCTGACGCGATGAGCTTACTAATGCGGCCATAACACCAATCGACGTCAAAGAAAGAAATTGGGCTAAAGCCCTTAT TTTATATTGTTTTATCCGCA
Product: glutamine amidotransferase class-I
Products: AMP; L-Glutamate; GMP; H+; Diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNNKLLIVQNISHEGPGILADLLKEHGIDFKLCDLSKGETAPDPAGFAGMVVLGGPQSANDATPQIISELALIKKALDSG VPYLGICLGLQLLVKARGGNVVKCPRQEIGFREPDGEPFMVELTDDDKRDALFHGMPERLRVFQLHGETVELADGMTLLA TGRGCTNQVVRVGSNAWGLQCHFEMTPEMFESWIGIDADLKAMNRNELLAEFDAISEEYAETGRSILLNFLAVTGLVKA
Sequences:
>Translated_239_residues MNNKLLIVQNISHEGPGILADLLKEHGIDFKLCDLSKGETAPDPAGFAGMVVLGGPQSANDATPQIISELALIKKALDSG VPYLGICLGLQLLVKARGGNVVKCPRQEIGFREPDGEPFMVELTDDDKRDALFHGMPERLRVFQLHGETVELADGMTLLA TGRGCTNQVVRVGSNAWGLQCHFEMTPEMFESWIGIDADLKAMNRNELLAEFDAISEEYAETGRSILLNFLAVTGLVKA >Mature_239_residues MNNKLLIVQNISHEGPGILADLLKEHGIDFKLCDLSKGETAPDPAGFAGMVVLGGPQSANDATPQIISELALIKKALDSG VPYLGICLGLQLLVKARGGNVVKCPRQEIGFREPDGEPFMVELTDDDKRDALFHGMPERLRVFQLHGETVELADGMTLLA TGRGCTNQVVRVGSNAWGLQCHFEMTPEMFESWIGIDADLKAMNRNELLAEFDAISEEYAETGRSILLNFLAVTGLVKA
Specific function: Catalyzes The Synthesis Of Gmp From Xmp. [C]
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 6.3.5.2 [C]
Molecular weight: Translated: 25934; Mature: 25934
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKLLIVQNISHEGPGILADLLKEHGIDFKLCDLSKGETAPDPAGFAGMVVLGGPQSAN CCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCC DATPQIISELALIKKALDSGVPYLGICLGLQLLVKARGGNVVKCPRQEIGFREPDGEPFM CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCEEE VELTDDDKRDALFHGMPERLRVFQLHGETVELADGMTLLATGRGCTNQVVRVGSNAWGLQ EEECCCCCHHHHHCCCHHHEEEEEECCCEEEECCCEEEEEECCCCHHHHHHCCCCCCEEE CHFEMTPEMFESWIGIDADLKAMNRNELLAEFDAISEEYAETGRSILLNFLAVTGLVKA EEEECCHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNKLLIVQNISHEGPGILADLLKEHGIDFKLCDLSKGETAPDPAGFAGMVVLGGPQSAN CCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCC DATPQIISELALIKKALDSGVPYLGICLGLQLLVKARGGNVVKCPRQEIGFREPDGEPFM CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCEEE VELTDDDKRDALFHGMPERLRVFQLHGETVELADGMTLLATGRGCTNQVVRVGSNAWGLQ EEECCCCCHHHHHCCCHHHEEEEEECCCEEEECCCEEEEEECCCCHHHHHHCCCCCCEEE CHFEMTPEMFESWIGIDADLKAMNRNELLAEFDAISEEYAETGRSILLNFLAVTGLVKA EEEECCHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 1 {NH4+}} 0.42 {6-thioXMP}} 0.53 {ATP}} 2 {1-ribosyl-4,6-dihydroxypyrazolo[3,4-d]-pyrimidine} 0.058 {XMP}} 0.029 {XMP}} 0.35 {8-azaXMP}} [C]
Substrates: ATP; L-Glutamine; H2O; Xanthosine 5'-phosphate [C]
Specific reaction: ATP + L-Glutamine + H2O + Xanthosine 5'-phosphate --> AMP + L-Glutamate + GMP + (2) H+ + Diphosphate [C]
General reaction: Amination [C]
Inhibitor: 1, N6-Ethenoadenosine; 1-Methyl adenosine 5'-phosphate 5'-phosphate; 2', 3'-Dihydroadenosine; 2'-Deoxyadenosine; 2, 6-Diaminopurine ribonucleoside; 2-Amino-6-methyl thiopurine ribonucleoside; 2-Fluoroadenosine; 3'-Deoxyadenosine; 5'-Azido-5'-deoxyadenosin
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]