Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is folE [H]
Identifier: 193212943
GI number: 193212943
Start: 1405989
End: 1406681
Strand: Direct
Name: folE [H]
Synonym: Cpar_1293
Alternate gene names: 193212943
Gene position: 1405989-1406681 (Clockwise)
Preceding gene: 193212942
Following gene: 193212963
Centisome position: 61.42
GC content: 54.55
Gene sequence:
>693_bases ATGAAGTCAAAATACATGAAACAGGAAAAAACAGTGTCACCTATCGTGGAGAATAACCGATCTGCAGAATCACGCCTTTC GCAATGCGATCTCGATGAGTGCTTTGATGAAGCTTGCGACCATCAGGAAGAGGAACGCCTCAGCTTGATGGGCAATGCCG TATACAGCCTTCTGCAAGGTATTGGAGAGGATCCGGAGCGTGAAGGGCTGCTTATGACCCCGGAGCGGGTAGCCAAATCT CTGCGATTTCTGACCAAAGGCTACGAGCAGGATCCGGAAGAGTTGCTGATGAAGGCGCTCTTTACCGAGTCGTATGATGA AATGGTGCTGGTCAAAGATATTGACCTCTACTCGATGTGCGAGCACCACATGCTCCCCTTCTTCGGCAAGGCGCACGTGG CCTACATTCCCGACGGCAAAATCGTAGGACTGTCCAAGATTCCGAGAGTAGTTGAGGTGTTCGCCCGGCGGCTTCAGGTG CAGGAGCGCCTGACACAGCAGATTCGGGATGCAATCCAGAACGTGCTCAACCCACGCGGCGTGGCAGTGGTGATCGAAGC GACTCACATGTGCATGGTGATGCGTGGCGTCGAAAAGCAGAACTCGGTGACCACGACCTCGGCCATGTCGGGCGACTTCA TGACAAGCCAGTCCACGCGGAGCGAGTTCCTGCGCCTGATCGGCAGCCACTAA
Upstream 100 bases:
>100_bases CTTCAGAACCACGTCCCGACAACGGAAATTCTGGCTGTTGTCGTGTGGGACATCCTCGAAACGCGACTGGAAACCATTAC CAAACAGGAGGTTAGCCTCC
Downstream 100 bases:
>100_bases CGTCGCGCCGGACAATCACCGCAGCACATAACAATGAAGAACCCCGCTTCTCTGATGAACTTTCGAGAAGCGGGGTTCTT CATTGTTCCAGCCACTCTTC
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKSKYMKQEKTVSPIVENNRSAESRLSQCDLDECFDEACDHQEEERLSLMGNAVYSLLQGIGEDPEREGLLMTPERVAKS LRFLTKGYEQDPEELLMKALFTESYDEMVLVKDIDLYSMCEHHMLPFFGKAHVAYIPDGKIVGLSKIPRVVEVFARRLQV QERLTQQIRDAIQNVLNPRGVAVVIEATHMCMVMRGVEKQNSVTTTSAMSGDFMTSQSTRSEFLRLIGSH
Sequences:
>Translated_230_residues MKSKYMKQEKTVSPIVENNRSAESRLSQCDLDECFDEACDHQEEERLSLMGNAVYSLLQGIGEDPEREGLLMTPERVAKS LRFLTKGYEQDPEELLMKALFTESYDEMVLVKDIDLYSMCEHHMLPFFGKAHVAYIPDGKIVGLSKIPRVVEVFARRLQV QERLTQQIRDAIQNVLNPRGVAVVIEATHMCMVMRGVEKQNSVTTTSAMSGDFMTSQSTRSEFLRLIGSH >Mature_230_residues MKSKYMKQEKTVSPIVENNRSAESRLSQCDLDECFDEACDHQEEERLSLMGNAVYSLLQGIGEDPEREGLLMTPERVAKS LRFLTKGYEQDPEELLMKALFTESYDEMVLVKDIDLYSMCEHHMLPFFGKAHVAYIPDGKIVGLSKIPRVVEVFARRLQV QERLTQQIRDAIQNVLNPRGVAVVIEATHMCMVMRGVEKQNSVTTTSAMSGDFMTSQSTRSEFLRLIGSH
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=190, Percent_Identity=54.7368421052632, Blast_Score=222, Evalue=2e-58, Organism=Homo sapiens, GI4503949, Length=190, Percent_Identity=54.7368421052632, Blast_Score=222, Evalue=2e-58, Organism=Homo sapiens, GI66932970, Length=158, Percent_Identity=50, Blast_Score=175, Evalue=3e-44, Organism=Homo sapiens, GI66932972, Length=149, Percent_Identity=52.3489932885906, Blast_Score=174, Evalue=6e-44, Organism=Escherichia coli, GI1788476, Length=190, Percent_Identity=44.2105263157895, Blast_Score=138, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17560486, Length=186, Percent_Identity=57.5268817204301, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6321706, Length=184, Percent_Identity=52.7173913043478, Blast_Score=211, Evalue=9e-56, Organism=Drosophila melanogaster, GI24656782, Length=197, Percent_Identity=53.8071065989848, Blast_Score=209, Evalue=1e-54, Organism=Drosophila melanogaster, GI24656791, Length=197, Percent_Identity=53.8071065989848, Blast_Score=209, Evalue=1e-54, Organism=Drosophila melanogaster, GI24656796, Length=197, Percent_Identity=53.8071065989848, Blast_Score=209, Evalue=2e-54,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 26171; Mature: 26171
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKYMKQEKTVSPIVENNRSAESRLSQCDLDECFDEACDHQEEERLSLMGNAVYSLLQG CCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH IGEDPEREGLLMTPERVAKSLRFLTKGYEQDPEELLMKALFTESYDEMVLVKDIDLYSMC CCCCCCCCCCEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHH EHHMLPFFGKAHVAYIPDGKIVGLSKIPRVVEVFARRLQVQERLTQQIRDAIQNVLNPRG HHHCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VAVVIEATHMCMVMRGVEKQNSVTTTSAMSGDFMTSQSTRSEFLRLIGSH EEEEEHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKSKYMKQEKTVSPIVENNRSAESRLSQCDLDECFDEACDHQEEERLSLMGNAVYSLLQG CCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH IGEDPEREGLLMTPERVAKSLRFLTKGYEQDPEELLMKALFTESYDEMVLVKDIDLYSMC CCCCCCCCCCEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHH EHHMLPFFGKAHVAYIPDGKIVGLSKIPRVVEVFARRLQVQERLTQQIRDAIQNVLNPRG HHHCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VAVVIEATHMCMVMRGVEKQNSVTTTSAMSGDFMTSQSTRSEFLRLIGSH EEEEEHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]