Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
---|---|
Accession | NC_011027 |
Length | 2,289,249 |
Click here to switch to the map view.
The map label for this gene is 193212963
Identifier: 193212963
GI number: 193212963
Start: 1425672
End: 1426196
Strand: Direct
Name: 193212963
Synonym: Cpar_1313
Alternate gene names: NA
Gene position: 1425672-1426196 (Clockwise)
Preceding gene: 193212943
Following gene: 193212964
Centisome position: 62.28
GC content: 55.62
Gene sequence:
>525_bases ATGCAACGAATGTACTCCCCCTGGCGCGAAGTGTATATGGACTCGTTCAAGGATGAAAAACACCCGAAGCCGGAGAAAGG CAAGTCCGTCTTCGCCGATATTCCGCCGGAGCAGGATGAAGAGCGCTACGTGCTCACTCGTGGTGAGTACTGCTTCGCCA TTCTGAATCTCTACCCGTACAACTGCGGGCACCTGATGGTCATTCCTTACCGCCAGACTCCGGAATTCAGCGATCTTGAC GACAAGACGATGCTTGAAATCATGCAAATCTCCGACCTCTGCATGAGAGCGCTCAAAATCACCCACAAGCCGCAGGGATT CAACTTCGGCGCCAACCTCGGCAAGGTTGCGGGCGGCAGCGTCGATACGCACATCCACTTCCACATCGTGCCCCGCTGGG AGGGCGACACCAACTTCATGCCGGTGCTCGGTGAAACCAAGGTGCTCTCCAACGACCTGCGCAGAACCTACGTCCAGCTC AAAGAGGCCATCGACAAGCTCAAAAGCGAGCAGAAAGCTTCGTAA
Upstream 100 bases:
>100_bases TCCCACCTTTGGTACGCAGTGATTGTTCAAGCCCCCTCTAAAATGTGTCATGATCCCGGCAACCCGTAAGACCGGATCAC AAGATCAGCAGAGATTTCCC
Downstream 100 bases:
>100_bases CCCGAGCACATGGAATCGGCCCCCTGCCCCCTCTCCGGAAACCGGGAGTTCACCCCGCTGATGCAGGTTCCCGACCGATT CAACCTTTCCGGCAAACCGT
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: ATP adenylyltransferase; Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase; AP,A phosphorylase [H]
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MQRMYSPWREVYMDSFKDEKHPKPEKGKSVFADIPPEQDEERYVLTRGEYCFAILNLYPYNCGHLMVIPYRQTPEFSDLD DKTMLEIMQISDLCMRALKITHKPQGFNFGANLGKVAGGSVDTHIHFHIVPRWEGDTNFMPVLGETKVLSNDLRRTYVQL KEAIDKLKSEQKAS
Sequences:
>Translated_174_residues MQRMYSPWREVYMDSFKDEKHPKPEKGKSVFADIPPEQDEERYVLTRGEYCFAILNLYPYNCGHLMVIPYRQTPEFSDLD DKTMLEIMQISDLCMRALKITHKPQGFNFGANLGKVAGGSVDTHIHFHIVPRWEGDTNFMPVLGETKVLSNDLRRTYVQL KEAIDKLKSEQKAS >Mature_174_residues MQRMYSPWREVYMDSFKDEKHPKPEKGKSVFADIPPEQDEERYVLTRGEYCFAILNLYPYNCGHLMVIPYRQTPEFSDLD DKTMLEIMQISDLCMRALKITHKPQGFNFGANLGKVAGGSVDTHIHFHIVPRWEGDTNFMPVLGETKVLSNDLRRTYVQL KEAIDKLKSEQKAS
Specific function: Catabolizes diadenosine 5',5'''-P1,P4-tetraphosphate (Ap4A) into ADP and ATP. It does not catalyze the reverse phosphorolysis reaction. The optimum substrates are dinucleoside polyphosphates containing four or five phosphate residues [H]
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: =2.7.7.53 [H]
Molecular weight: Translated: 20219; Mature: 20219
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRMYSPWREVYMDSFKDEKHPKPEKGKSVFADIPPEQDEERYVLTRGEYCFAILNLYPY CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCEEEEEECCCC NCGHLMVIPYRQTPEFSDLDDKTMLEIMQISDLCMRALKITHKPQGFNFGANLGKVAGGS CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC VDTHIHFHIVPRWEGDTNFMPVLGETKVLSNDLRRTYVQLKEAIDKLKSEQKAS EEEEEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQRMYSPWREVYMDSFKDEKHPKPEKGKSVFADIPPEQDEERYVLTRGEYCFAILNLYPY CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCEEEEEECCCC NCGHLMVIPYRQTPEFSDLDDKTMLEIMQISDLCMRALKITHKPQGFNFGANLGKVAGGS CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC VDTHIHFHIVPRWEGDTNFMPVLGETKVLSNDLRRTYVQLKEAIDKLKSEQKAS EEEEEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036 [H]